LOC127893938 (H3K27ac hESC enhancer GRCh37_chr20:57021533-57022034) - Rat Genome Database

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Gene: LOC127893938 (H3K27ac hESC enhancer GRCh37_chr20:57021533-57022034) Homo sapiens
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Symbol: LOC127893938
Name: H3K27ac hESC enhancer GRCh37_chr20:57021533-57022034
RGD ID: 155779099
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in primed human embryonic stem cells. This enhancer is marked by the H3K27ac histone modification. [provided by RefSeq, Dec 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382058,446,477 - 58,446,978 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372057,021,533 - 57,022,034 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.02060,227,534 - 60,228,035 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics

Variants

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Variants in LOC127893938
7 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2292864PRSTS43_HProstate tumor susceptibility QTL 43 (human)0.620.05Prostate tumor susceptibility204730303964444167Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127893938 COSMIC
GTEx LOC127893938 GTEx
Human Proteome Map LOC127893938 Human Proteome Map
NCBI Gene LOC127893938 ENTREZGENE