LOC127893583 (H3K4me1 hESC enhancer GRCh37_chr20:47414263-47414873) - Rat Genome Database

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Gene: LOC127893583 (H3K4me1 hESC enhancer GRCh37_chr20:47414263-47414873) Homo sapiens
Analyze
Symbol: LOC127893583
Name: H3K4me1 hESC enhancer GRCh37_chr20:47414263-47414873
RGD ID: 155778139
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Dec 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382048,797,726 - 48,798,336 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372047,414,263 - 47,414,873 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.02050,567,552 - 50,568,162 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2292864PRSTS43_HProstate tumor susceptibility QTL 43 (human)0.620.05Prostate tumor susceptibility204730303964444167Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127893583 COSMIC
GTEx LOC127893583 GTEx
Human Proteome Map LOC127893583 Human Proteome Map
NCBI Gene LOC127893583 ENTREZGENE