LOC127889958 (H3K4me1 hESC enhancer GRCh37_chr19:2173473-2173991) - Rat Genome Database

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Gene: LOC127889958 (H3K4me1 hESC enhancer GRCh37_chr19:2173473-2173991) Homo sapiens
Analyze
Symbol: LOC127889958
Name: H3K4me1 hESC enhancer GRCh37_chr19:2173473-2173991
RGD ID: 155759479
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Dec 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,173,474 - 2,173,992 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37192,173,473 - 2,173,991 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.0192,146,721 - 2,147,239 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298499UAE1_HUrinary albumin excretion QTL 1 (human)2.730.0009Urinary albumin excretionurine albumin:creatinine ratio (ACR)19116075902Human
407113317GWAS762293_Hwaist-hip ratio QTL GWAS762293 (human)4e-14waist-hip ratiowaist to hip ratio (WHR) (CMO:0000020)1921738372173838Human
1643451SLIPL6_HSerum lipid level QTL 6 (human)2.190.0008Lipid level19116075902Human
1581534BP76_HBlood pressure QTL 76 (human)20.001Blood pressurepulse pressure19116075902Human
1581535BP65_HBlood pressure QTL 65 (human)3.10.001Blood pressurepulse pressure19116075902Human
597059198GWAS1155272_HBMI-adjusted waist-hip ratio QTL GWAS1155272 (human)1e-13body size trait (VT:0100005)1921738372173838Human
2314591INSUL4_HInsulin level QTL 4 (human)3.80.000038Insulin levelfasting19116075902Human
1298476BP3_HBlood pressure QTL 3 (human)2.4Blood pressuresystolic19116075902Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127889958 COSMIC
GTEx LOC127889958 GTEx
Human Proteome Map LOC127889958 Human Proteome Map
NCBI Gene LOC127889958 ENTREZGENE