LOC127890074 (H3K4me1 hESC enhancer GRCh37_chr19:3713049-3713548) - Rat Genome Database
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Summary
Gene: LOC127890074 (H3K4me1 hESC enhancer GRCh37_chr19:3713049-3713548) Homo sapiens
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General
Array IDs
Symbol:
LOC127890074
Name:
H3K4me1 hESC enhancer GRCh37_chr19:3713049-3713548
RGD ID:
155754785
Description:
This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Dec 2022]
Type:
biological-region
RefSeq Status:
REVIEWED
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCh38
19
3,713,051 - 3,713,550 (+)
NCBI
GRCh38
GRCh38
hg38
GRCh38
GRCh37
19
3,713,049 - 3,713,548 (+)
NCBI
GRCh37
GRCh37
hg19
GRCh37
T2T-CHM13v2.0
19
3,691,452 - 3,691,951 (+)
NCBI
T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Detail View
References
Additional References at PubMed
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PMID:
30033119
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Genomics
.
QTLs in Region (GRCh38)
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The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298499
UAE1_H
Urinary albumin excretion QTL 1 (human)
2.73
0.0009
Urinary albumin excretion
urine albumin:creatinine ratio (ACR)
19
1
16075902
Human
1643451
SLIPL6_H
Serum lipid level QTL 6 (human)
2.19
0.0008
Lipid level
19
1
16075902
Human
1581534
BP76_H
Blood pressure QTL 76 (human)
2
0.001
Blood pressure
pulse pressure
19
1
16075902
Human
1581535
BP65_H
Blood pressure QTL 65 (human)
3.1
0.001
Blood pressure
pulse pressure
19
1
16075902
Human
2314591
INSUL4_H
Insulin level QTL 4 (human)
3.8
0.000038
Insulin level
fasting
19
1
16075902
Human
1298476
BP3_H
Blood pressure QTL 3 (human)
2.4
Blood pressure
systolic
19
1
16075902
Human
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Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Sequence
Nucleotide Sequences
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RefSeq Transcripts
NG_140031
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
AC006125
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
CP068259
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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Additional Information
External Database Links
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Database
Acc Id
Source(s)
COSMIC
LOC127890074
COSMIC
GTEx
LOC127890074
GTEx
Human Proteome Map
LOC127890074
Human Proteome Map
NCBI Gene
LOC127890074
ENTREZGENE
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