LOC127893814 (H3K4me1 hESC enhancer GRCh37_chr20:55086509-55087317) - Rat Genome Database

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Gene: LOC127893814 (H3K4me1 hESC enhancer GRCh37_chr20:55086509-55087317) Homo sapiens
Analyze
Symbol: LOC127893814
Name: H3K4me1 hESC enhancer GRCh37_chr20:55086509-55087317
RGD ID: 155751008
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in primed human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Dec 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382056,511,453 - 56,512,261 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372055,086,509 - 55,087,317 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.02058,288,957 - 58,289,765 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2292864PRSTS43_HProstate tumor susceptibility QTL 43 (human)0.620.05Prostate tumor susceptibility204730303964444167Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127893814 COSMIC
GTEx LOC127893814 GTEx
Human Proteome Map LOC127893814 Human Proteome Map
NCBI Gene LOC127893814 ENTREZGENE