LOC127396835 (H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:14942239-14943121) - Rat Genome Database

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Gene: LOC127396835 (H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:14942239-14943121) Homo sapiens
Analyze
Symbol: LOC127396835
Name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:14942239-14943121
RGD ID: 155660425
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive human embryonic stem cells. This enhancer is marked by the H3K27ac and H3K4me1 histone modifications. [provided by RefSeq, Oct 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38314,900,732 - 14,901,614 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37314,942,239 - 14,943,121 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.0314,903,179 - 14,904,061 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics

Variants

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Variants in LOC127396835
3 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127396835 COSMIC
GTEx LOC127396835 GTEx
Human Proteome Map LOC127396835 Human Proteome Map
NCBI Gene LOC127396835 ENTREZGENE