LOC127408000 (H3K4me1 hESC enhancer GRCh37_chr6:170504194-170504694) - Rat Genome Database

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Gene: LOC127408000 (H3K4me1 hESC enhancer GRCh37_chr6:170504194-170504694) Homo sapiens
Analyze
Symbol: LOC127408000
Name: H3K4me1 hESC enhancer GRCh37_chr6:170504194-170504694
RGD ID: 155658478
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in primed human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Oct 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386170,188,970 - 170,189,470 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh376170,504,194 - 170,504,694 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.06171,550,893 - 171,551,393 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127408000 COSMIC
GTEx LOC127408000 GTEx
Human Proteome Map LOC127408000 Human Proteome Map
NCBI Gene LOC127408000 ENTREZGENE