AABR07032392.1 (null) - Rat Genome Database

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Gene: AABR07032392.1 (null) Rattus norvegicus
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Symbol: AABR07032392.1
Name:
RGD ID: 15005587
Description: ENCODES a protein that exhibits NAD binding (inferred); NADP binding (inferred); peptidyl-cysteine S-nitrosylase activity (inferred); INVOLVED IN apoptotic process (inferred); glucose metabolic process (inferred); glycolytic process (inferred); FOUND IN cytoskeleton (inferred); nucleus (inferred)
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl1861,627,156 - 61,628,375 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1863,824,407 - 63,825,408 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoskeleton  (IEA)
cytosol  (IBA)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 57 31

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSRNOT00000043709   ⟹   ENSRNOP00000039818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1861,627,156 - 61,628,375 (-)Ensembl
Rnor_6.0 Ensembl1863,824,407 - 63,825,408 (-)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000039818.4
Ensembl Acc Id: ENSRNOP00000039818   ⟸   ENSRNOT00000043709
Protein Domains
Glyceraldehyde 3-phosphate dehydrogenase NAD(P)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PTV9-F1-model_v2 AlphaFold E9PTV9 1-333 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000048704 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000043709.5 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro GlycerAld/Erythrose_P_DH UniProtKB/TrEMBL
  GlycerAld_3-P_DH_AS UniProtKB/TrEMBL
  GlycerAld_3-P_DH_cat UniProtKB/TrEMBL
  GlycerAld_3-P_DH_NAD(P)-bd UniProtKB/TrEMBL
  Glyceraldehyde-3-P_DH_1 UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE UniProtKB/TrEMBL
  GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE UniProtKB/TrEMBL
Pfam Gp_dh_C UniProtKB/TrEMBL
  Gp_dh_N UniProtKB/TrEMBL
PhenoGen AABR07032392.1 PhenoGen
PIRSF GAP_DH UniProtKB/TrEMBL
PRINTS G3PDHDRGNASE UniProtKB/TrEMBL
PROSITE GAPDH UniProtKB/TrEMBL
RatGTEx ENSRNOG00000048704 RatGTEx
SMART Gp_dh_N UniProtKB/TrEMBL
Superfamily-SCOP Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain UniProtKB/TrEMBL
  NAD(P)-binding Rossmann-fold domains UniProtKB/TrEMBL
UniProt E9PTV9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07032392.1        Symbol and Name status set to provisional 45752 PROVISIONAL