AABR07025010.1 (null) - Rat Genome Database

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Gene: AABR07025010.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07025010.1
Name:
RGD ID: 15004007
Description: Predicted to enable NAD binding activity and peptidyl-cysteine S-nitrosylase activity. Predicted to be involved in apoptotic process and regulation of translation. Predicted to be located in cytoskeleton and nucleus.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl1646,413,378 - 46,414,771 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1625,773,602 - 25,774,845 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoskeleton  (IEA)
cytosol  (IBA)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 58 31

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSRNOT00000047750   ⟹   ENSRNOP00000050213
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1646,413,378 - 46,414,771 (+)Ensembl
Rnor_6.0 Ensembl1625,773,602 - 25,774,845 (+)Ensembl
Protein Sequences
Ensembl Protein ENSRNOP00000050213.3
Ensembl Acc Id: ENSRNOP00000050213   ⟸   ENSRNOT00000047750
Protein Domains
Glyceraldehyde 3-phosphate dehydrogenase NAD(P)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZGY4-F1-model_v2 AlphaFold D3ZGY4 1-333 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000033057 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000047750.5 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro GlycerAld/Erythrose_P_DH UniProtKB/TrEMBL
  GlycerAld_3-P_DH_cat UniProtKB/TrEMBL
  GlycerAld_3-P_DH_NAD(P)-bd UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE UniProtKB/TrEMBL
  PTHR10836 UniProtKB/TrEMBL
Pfam Gp_dh_C UniProtKB/TrEMBL
PhenoGen AABR07025010.1 PhenoGen
PRINTS G3PDHDRGNASE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000033057 RatGTEx
SMART Gp_dh_N UniProtKB/TrEMBL
Superfamily-SCOP Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain UniProtKB/TrEMBL
  SSF51735 UniProtKB/TrEMBL
UniProt D3ZGY4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07025010.1        Symbol and Name status set to provisional 45752 PROVISIONAL