Gm23261 (predicted gene, 23261) - Rat Genome Database

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Gene: Gm23261 (predicted gene, 23261) Mus musculus
Analyze
Symbol: Gm23261
Name: predicted gene, 23261
RGD ID: 15001970
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392151,214,283 - 151,214,418 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2151,214,283 - 151,214,418 (-)EnsemblGRCm39 Ensembl
GRCm382151,372,363 - 151,372,498 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2151,372,363 - 151,372,498 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map2G3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm23261
6 total Variants

Predicted Target Of
Summary Value
Count of predictions:206
Count of miRNA genes:198
Interacting mature miRNAs:205
Transcripts:ENSMUST00000158316
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 45 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse

1 to 10 of 45 rows





RefSeq Transcripts XR_004941221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL845308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000158316
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2151,372,363 - 151,372,498 (-)Ensembl
Ensembl Acc Id: ENSMUST00000240296
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2151,214,283 - 151,214,418 (-)Ensembl
RefSeq Acc Id: XR_004941221
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392151,214,283 - 151,214,418 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000088941 Ensembl
  ENSMUSG00000119525 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000240296 ENTREZGENE
MGD MGI:5453038 ENTREZGENE
NCBI Gene Gm23261 ENTREZGENE
PhenoGen Gm23261 PhenoGen
RNAcentral URS000065280C RNACentral