Gm24718 (predicted gene, 24718) - Rat Genome Database

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Gene: Gm24718 (predicted gene, 24718) Mus musculus
Analyze
Symbol: Gm24718
Name: predicted gene, 24718
RGD ID: 15000456
MGI Page MGI
Description:
Type: ncrna (Ensembl: scaRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X95,194,443 - 95,194,578 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX95,194,443 - 95,194,578 (-)EnsemblGRCm39 Ensembl
GRCm38X96,150,837 - 96,150,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX96,150,837 - 96,150,972 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXC3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm24718
7 total Variants

Predicted Target Of
Summary Value
Count of predictions:41
Count of miRNA genes:39
Interacting mature miRNAs:39
Transcripts:ENSMUST00000157521
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 12 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse

1 to 10 of 12 rows





RefSeq Transcripts XR_004940560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL805963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000157521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX95,194,443 - 95,194,578 (-)Ensembl
GRCm38.p6 EnsemblX96,150,837 - 96,150,972 (-)Ensembl
RefSeq Acc Id: XR_004940560
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X95,194,443 - 95,194,578 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000088146 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000157521 ENTREZGENE
MGD MGI:5454495 ENTREZGENE
NCBI Gene Gm24718 ENTREZGENE
PhenoGen Gm24718 PhenoGen
RNAcentral URS0000627ECE RNACentral