Gm42875 (predicted gene 42875) - Rat Genome Database

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Gene: Gm42875 (predicted gene 42875) Mus musculus
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Symbol: Gm42875
Name: predicted gene 42875
RGD ID: 15000344
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395128,847,097 - 128,854,902 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5128,846,543 - 128,854,903 (+)EnsemblGRCm39 Ensembl
GRCm385128,770,188 - 128,777,838 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5128,769,524 - 128,777,837 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map5G1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  



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Variants in Gm42875
536 total Variants

1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
1301715Elmaz2_melevated maze behavior 2 (mouse)Not determined5125178229141700466Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119945037141700466Mouse
13464142Bbaa2a_mB.burgdorferi-associated arthritis 2a (mouse)5128571199130052971Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5114021753129632606Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse

1 to 10 of 42 rows





RefSeq Transcripts XR_003955998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC111089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000197674
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5128,846,588 - 128,854,901 (+)Ensembl
GRCm38.p6 Ensembl5128,769,524 - 128,777,837 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304359
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5128,846,543 - 128,854,903 (+)Ensembl
RefSeq Acc Id: XR_003955998
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395128,847,097 - 128,854,902 (+)NCBI
GRCm385128,770,188 - 128,777,838 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000105271 Ensembl
MGD MGI:5663012 ENTREZGENE
NCBI Gene Gm42875 ENTREZGENE
PhenoGen Gm42875 PhenoGen
RNAcentral URS00008117D2 RNACentral