Gm25512 (predicted gene, 25512) - Rat Genome Database

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Gene: Gm25512 (predicted gene, 25512) Mus musculus
Analyze
Symbol: Gm25512
Name: predicted gene, 25512
RGD ID: 14998228
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,443,856 - 164,443,962 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2164,443,856 - 164,443,962 (+)EnsemblGRCm39 Ensembl
GRCm382164,601,936 - 164,602,042 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,601,936 - 164,602,042 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map2H3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm25512
12 total Variants

Predicted Target Of
Summary Value
Count of predictions:66
Count of miRNA genes:42
Interacting mature miRNAs:42
Transcripts:ENSMUST00000083863
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 44 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse

1 to 10 of 44 rows





RefSeq Transcripts XR_004941260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL591478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000083863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,443,856 - 164,443,962 (+)Ensembl
GRCm38.p6 Ensembl2164,601,936 - 164,602,042 (+)Ensembl
RefSeq Acc Id: XR_004941260
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392164,443,856 - 164,443,962 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000065797 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083863 ENTREZGENE
MGD MGI:5455289 ENTREZGENE
NCBI Gene Gm25512 ENTREZGENE
PhenoGen Gm25512 PhenoGen
RNAcentral URS00006B4061 RNACentral