Gm25115 (predicted gene, 25115) - Rat Genome Database

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Gene: Gm25115 (predicted gene, 25115) Mus musculus
Analyze
Symbol: Gm25115
Name: predicted gene, 25115
RGD ID: 14997721
MGI Page MGI
Description:
Type: pseudo (Ensembl: snRNA)
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391486,645,958 - 86,646,097 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1486,645,958 - 86,646,097 (+)EnsemblGRCm39 Ensembl
GRCm381486,408,522 - 86,408,661 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1486,408,522 - 86,408,661 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map14E1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gm25115
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391486,645,958 - 86,646,097 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1486,645,958 - 86,646,097 (+)EnsemblGRCm39 Ensembl
GRCm381486,408,522 - 86,408,661 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1486,408,522 - 86,408,661 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map14E1NCBI
RNU1-94P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382031,901,254 - 31,901,426 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2031,901,254 - 31,901,426 (+)EnsemblGRCh38hg38GRCh38
GRCh372030,489,057 - 30,489,229 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map20q11.21NCBI
CHM1_12030,393,003 - 30,393,175 (+)NCBICHM1_1
T2T-CHM13v2.02033,625,898 - 33,626,070 (+)NCBIT2T-CHM13v2.0

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Variants in Gm25115
13 total Variants

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:50
Interacting mature miRNAs:51
Transcripts:ENSMUST00000157187
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 17 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
1300666Fembm2_mfemoral bone morphometry 2 (mouse)Not determined146239746096397680Mouse
11039527Ccc2_mcolitis susceptibility in the Collaborative Cross 2 (mouse)145991861294138217Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse

1 to 10 of 17 rows





GenBank Nucleotide CT010577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000157187
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1486,645,958 - 86,646,097 (+)Ensembl
GRCm38.p6 Ensembl1486,408,522 - 86,408,661 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000087812 Ensembl, ENTREZGENE
MGD MGI:5454892 ENTREZGENE
NCBI Gene Gm25115 ENTREZGENE
PhenoGen Gm25115 PhenoGen
RNAcentral URS00006D1A53 RNACentral