Gm22823 (predicted gene, 22823) - Rat Genome Database

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Gene: Gm22823 (predicted gene, 22823) Mus musculus
Analyze
Symbol: Gm22823
Name: predicted gene, 22823
RGD ID: 14996366
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391440,969,643 - 40,969,749 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1440,969,643 - 40,969,749 (+)EnsemblGRCm39 Ensembl
GRCm381441,247,686 - 41,247,792 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1441,247,686 - 41,247,792 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map14BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm22823
4 total Variants

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:35
Interacting mature miRNAs:35
Transcripts:ENSMUST00000179754
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse

1 to 10 of 22 rows





RefSeq Transcripts XR_004938755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000179754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1441,247,686 - 41,247,792 (+)Ensembl
Ensembl Acc Id: ENSMUST00000239681
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1440,969,643 - 40,969,749 (+)Ensembl
RefSeq Acc Id: XR_004938755
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391440,969,643 - 40,969,749 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000094710 Ensembl
  ENSMUSG00000119656 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000239681 ENTREZGENE
MGD MGI:5452600 ENTREZGENE
NCBI Gene Gm22823 ENTREZGENE
PhenoGen Gm22823 PhenoGen
RNAcentral URS00001EC8D7 RNACentral