IFN-DELTA-2 (interferon-delta-2) - Rat Genome Database

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Gene: IFN-DELTA-2 (interferon-delta-2) Sus scrofa
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Symbol: IFN-DELTA-2 (Ensembl: IFN-DELTA-1)
Name: interferon-delta-2 (Ensembl:interferon-delta-1)
RGD ID: 14246814
Description: ENCODES a protein that exhibits cytokine activity (inferred); cytokine receptor binding (inferred); INVOLVED IN defense response (inferred); defense response to virus (inferred); signal transduction (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: IFN-delta-1; interferon-delta-1; short type I interferon; spI IFN
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1201,654,500 - 201,655,595 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11201,495,440 - 201,496,375 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21225,068,226 - 225,068,713 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:20406849   PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in IFN-DELTA-2
3 total Variants

Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSSCT00000005680   ⟹   ENSSSCP00000005539
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1201,654,500 - 201,655,595 (+)Ensembl
RefSeq Acc Id: XM_021063028   ⟹   XP_020918687
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11201,495,440 - 201,496,375 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020918687   ⟸   XM_021063028
- UniProtKB: A0A4X1WBY1 (UniProtKB/TrEMBL),   C8CKB2 (UniProtKB/TrEMBL),   A0A8D0TJA0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000005539   ⟸   ENSSSCT00000005680


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000005152 Ensembl, UniProtKB/TrEMBL
  ENSSSCG00000057745 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025058427 UniProtKB/TrEMBL
  ENSSSCG00025076719 UniProtKB/TrEMBL
  ENSSSCG00035032787 UniProtKB/TrEMBL
  ENSSSCG00040043856 UniProtKB/TrEMBL
  ENSSSCG00040072597 UniProtKB/TrEMBL
  ENSSSCG00045000942 UniProtKB/TrEMBL
  ENSSSCG00050074695 UniProtKB/TrEMBL
  ENSSSCG00055002718 UniProtKB/TrEMBL
  ENSSSCG00055029501 UniProtKB/TrEMBL
  ENSSSCG00060039300 UniProtKB/TrEMBL
  ENSSSCG00065032970 UniProtKB/TrEMBL
  ENSSSCG00065033001 UniProtKB/TrEMBL
  ENSSSCG00070030337 UniProtKB/TrEMBL
  ENSSSCG00070030348 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000005680.2 UniProtKB/TrEMBL
  ENSSSCT00000106067 ENTREZGENE
  ENSSSCT00000106067.1 UniProtKB/TrEMBL
  ENSSSCT00025079966.1 UniProtKB/TrEMBL
  ENSSSCT00025106337.1 UniProtKB/TrEMBL
  ENSSSCT00035043428.1 UniProtKB/TrEMBL
  ENSSSCT00040058778.1 UniProtKB/TrEMBL
  ENSSSCT00040100014.1 UniProtKB/TrEMBL
  ENSSSCT00045001386.1 UniProtKB/TrEMBL
  ENSSSCT00050102255.1 UniProtKB/TrEMBL
  ENSSSCT00055005189.1 UniProtKB/TrEMBL
  ENSSSCT00055058584.1 UniProtKB/TrEMBL
  ENSSSCT00060053154.1 UniProtKB/TrEMBL
  ENSSSCT00065044748.1 UniProtKB/TrEMBL
  ENSSSCT00065044793.1 UniProtKB/TrEMBL
  ENSSSCT00070061065.1 UniProtKB/TrEMBL
  ENSSSCT00070061078.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.10 UniProtKB/TrEMBL
InterPro 4_helix_cytokine-like_core UniProtKB/TrEMBL
  Interferon_alpha/beta/delta UniProtKB/TrEMBL
NCBI Gene IFN-DELTA-2 ENTREZGENE
PANTHER INTERFERON 1GA2 UniProtKB/TrEMBL
  PTHR11691 UniProtKB/TrEMBL
Pfam Interferon UniProtKB/TrEMBL
PRINTS INTERFERONAB UniProtKB/TrEMBL
PROSITE INTERFERON_A_B_D UniProtKB/TrEMBL
SMART IFabd UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/TrEMBL
UniProt A0A4X1WBY1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1WBZ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0TJA0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZN21 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1ELL6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KLS3_PIG UniProtKB/TrEMBL
  C8CKB2 ENTREZGENE, UniProtKB/TrEMBL
  Q29115 ENTREZGENE, UniProtKB/TrEMBL