LOC110259337 (zinc finger protein 709-like) - Rat Genome Database

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Gene: LOC110259337 (zinc finger protein 709-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC110259337
Name: zinc finger protein 709-like
RGD ID: 14182924
Description: ENCODES a pseudogene that exhibits DNA binding (inferred); metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred)
Type: pseudo
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1266,449,937 - 66,466,384 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleoplasm  (IBA)

References

Genomics

Variants

.
Variants in LOC110259337
247 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AEMK02000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Ensembl Protein ENSSSCP00000048829.1
  ENSSSCP00000080372.1
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000033388 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000039679.3 UniProtKB/TrEMBL
  ENSSSCT00000094356.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro C2H2-ZF_domain UniProtKB/TrEMBL
  KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene LOC110259337 ENTREZGENE
PANTHER FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED UniProtKB/TrEMBL
  IP01201P-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 628 UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP KRAB domain (Kruppel-associated box) UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A287AY66_PIG UniProtKB/TrEMBL
  A0A8W4FMG0_PIG UniProtKB/TrEMBL