JAKMIP3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 140,397,188 - 140,493,774 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 140,397,146 - 140,495,317 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 152,229,976 - 152,309,716 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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JAKMIP3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 132,036,364 - 132,184,858 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 132,036,336 - 132,184,858 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 133,849,868 - 133,998,362 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 133,768,303 - 133,830,527 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 133,805,421 - 133,848,302 | NCBI | | | | | Celera | 10 | 127,562,508 - 127,643,434 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26.3 | NCBI | | | | | HuRef | 10 | 127,467,260 - 127,550,043 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 134,200,215 - 134,280,494 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 132,976,652 - 133,128,086 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Jakmip3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 138,542,057 - 138,663,893 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 138,542,459 - 138,663,892 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 138,940,730 - 139,083,976 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 138,940,730 - 139,083,977 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 146,132,433 - 146,218,525 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv37 | 7 | 146,248,506 - 146,269,875 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 138,779,404 - 138,865,191 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 12 | 8,386,377 - 8,534,544 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 138,757,548 - 138,879,325 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | F4 | NCBI | | | | | cM Map | 7 | 83.0 | NCBI | | | | |
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Jakmip3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 203,182,764 - 203,310,714 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 193,753,134 - 193,881,105 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 193,811,513 - 193,881,104 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 202,181,878 - 202,251,466 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 209,316,715 - 209,386,257 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 201,990,201 - 202,059,739 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 211,292,604 - 211,421,023 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 211,351,350 - 211,421,022 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 218,219,463 - 218,347,772 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 198,793,647 - 198,864,034 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 198,884,806 - 198,980,609 (+) | NCBI | | | | | Celera | 1 | 191,501,095 - 191,570,038 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q41 | NCBI | | | | |
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Jakmip3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955477 | 9,680,798 - 9,807,420 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955477 | 9,681,239 - 9,827,704 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JAKMIP3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 8 | 143,993,759 - 144,151,225 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 143,999,121 - 144,156,582 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 128,763,675 - 128,853,537 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 132,955,051 - 133,076,993 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 132,993,545 - 133,056,352 (+) | Ensembl | panpan1.1 | | panPan2 | |
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JAKMIP3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 28 | 40,101,607 - 40,152,821 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 40,101,267 - 40,157,243 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 40,137,990 - 40,235,392 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 40,718,565 - 40,816,531 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 40,718,549 - 40,803,055 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 40,227,416 - 40,300,462 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 40,191,250 - 40,288,347 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 40,590,251 - 40,687,628 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Jakmip3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 6,979,693 - 7,079,767 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936486 | 18,509,166 - 18,567,463 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936486 | 18,481,413 - 18,583,030 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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JAKMIP3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 9 | 124,630,893 - 124,775,995 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 124,657,592 - 124,754,528 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 86,142,523 - 86,221,646 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Jakmip3 (Heterocephalus glaber - naked mole-rat) |
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