LOC100523457 (olfactory guanylyl cyclase GC-D-like) - Rat Genome Database

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Gene: LOC100523457 (olfactory guanylyl cyclase GC-D-like) Sus scrofa
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Symbol: LOC100523457
Name: olfactory guanylyl cyclase GC-D-like
RGD ID: 14041763
Description: ENCODES a protein that exhibits ATP binding (inferred); lyase activity (inferred); odorant binding (inferred); INVOLVED IN cGMP biosynthetic process (inferred); cyclic nucleotide biosynthetic process (inferred); detection of carbon dioxide (inferred); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1910,833,010 - 10,867,824 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2911,944,085 - 11,978,988 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC100523457
2208 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021062551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021062551   ⟹   XP_020918210
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1910,833,010 - 10,867,824 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020918210 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000078306.1
RefSeq Acc Id: XP_020918210   ⟸   XM_021062551
- Sequence:
Protein Domains
Guanylate cyclase   Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000055915 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000098021.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.2300 UniProtKB/TrEMBL
  Nucleotide cyclase UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro A/G_cyclase UniProtKB/TrEMBL
  A/G_cyclase_CS UniProtKB/TrEMBL
  ANF_lig-bd_rcpt UniProtKB/TrEMBL
  Cyclic_nucleotide_synthase UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Nucleotide_cyclase UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
NCBI Gene LOC100523457 ENTREZGENE
PANTHER GUANYLATE CYCLASE D UniProtKB/TrEMBL
  GUANYLYL CYCLASE UniProtKB/TrEMBL
Pfam ANF_receptor UniProtKB/TrEMBL
  Guanylate_cyc UniProtKB/TrEMBL
  PK_Tyr_Ser-Thr UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/TrEMBL
PROSITE GUANYLATE_CYCLASE_1 UniProtKB/TrEMBL
  GUANYLATE_CYCLASE_2 UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
SMART CYCc UniProtKB/TrEMBL
Superfamily-SCOP Nucleotide cyclase UniProtKB/TrEMBL
  Periplasmic binding protein-like I UniProtKB/TrEMBL
  Protein kinase-like (PK-like) UniProtKB/TrEMBL
UniProt A0A8W4FHF6_PIG UniProtKB/TrEMBL