RPL23AP5 (ribosomal protein L23a pseudogene 5) - Rat Genome Database

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Gene: RPL23AP5 (ribosomal protein L23a pseudogene 5) Homo sapiens
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Symbol: RPL23AP5
Name: ribosomal protein L23a pseudogene 5
RGD ID: 1344515
HGNC Page HGNC:14194
Description: INTERACTS WITH N-Nitrosopyrrolidine
Type: pseudo
RefSeq Status: INFERRED
Previously known as: c367G8.3; ribosomal protein L23a (RPL23A) pseudogene; rjd10; RPL23A_35_1465; RPL23AL; RPL2B; Z97634.1
Related Functional Gene: RPL23A  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816386,746 - 387,290 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl16382,097 - 392,960 (+)NCBIGRCh38hg38GRCh38
GRCh3716436,746 - 437,290 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3616376,764 - 377,234 (+)NCBINCBI36Build 36hg18NCBI36
Celera16637,294 - 637,838 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef16355,624 - 356,170 (+)NCBIHuRef
CHM1_116436,678 - 437,222 (+)NCBICHM1_1
T2T-CHM13v2.016382,635 - 383,179 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:9054936   PMID:11157797   PMID:12477932   PMID:19123937   PMID:23446634   PMID:25315684   PMID:26598620   PMID:37151849  


Genomics

Markers in Region
ECD10392  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716436,014 - 436,617UniSTSGRCh37
Build 3616376,015 - 376,618RGDNCBI36
Celera16636,562 - 637,165RGD
Cytogenetic Map16p13.3UniSTS
HuRef16354,893 - 355,496UniSTS
REN95789  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716434,973 - 435,223UniSTSGRCh37
Build 3616374,974 - 375,224RGDNCBI36
Celera16635,521 - 635,771RGD
Cytogenetic Map16p13.3UniSTS
HuRef16353,851 - 354,101UniSTS
REN95790  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716435,919 - 436,160UniSTSGRCh37
Build 3616375,920 - 376,161RGDNCBI36
Celera16636,467 - 636,708RGD
Cytogenetic Map16p13.3UniSTS
HuRef16354,798 - 355,039UniSTS
REN95791  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716436,155 - 436,399UniSTSGRCh37
Build 3616376,156 - 376,400RGDNCBI36
Celera16636,703 - 636,947RGD
Cytogenetic Map16p13.3UniSTS
HuRef16355,034 - 355,278UniSTS
REN95792  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716436,392 - 436,617UniSTSGRCh37
Build 3616376,393 - 376,618RGDNCBI36
Celera16636,940 - 637,165RGD
Cytogenetic Map16p13.3UniSTS
HuRef16355,271 - 355,496UniSTS
REN95793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716436,591 - 436,855UniSTSGRCh37
Build 3616376,592 - 376,856RGDNCBI36
Celera16637,139 - 637,403RGD
Cytogenetic Map16p13.3UniSTS
HuRef16355,470 - 355,733UniSTS
REN95795  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716436,976 - 437,208UniSTSGRCh37
Build 3616376,977 - 377,209RGDNCBI36
Celera16637,524 - 637,756RGD
Cytogenetic Map16p13.3UniSTS
HuRef16355,854 - 356,086UniSTS
REN95796  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716437,100 - 437,333UniSTSGRCh37
Build 3616377,101 - 377,334RGDNCBI36
Celera16637,648 - 637,881RGD
Cytogenetic Map16p13.3UniSTS
HuRef16355,978 - 356,213UniSTS
stSG609089  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3716435,213 - 436,562UniSTSGRCh37
Build 3616375,214 - 376,563RGDNCBI36
Celera16635,761 - 637,110RGD
Cytogenetic Map16p13.3UniSTS
HuRef16354,091 - 355,441UniSTS


Expression

RNA-SEQ Expression


Sequence


Protein Sequences
GenBank Protein AAI46940 (Get FASTA)   NCBI Sequence Viewer  
  AAI46943 (Get FASTA)   NCBI Sequence Viewer  
  AAK61228 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
COSMIC RPL23AP5 COSMIC
Ensembl Genes ENSG00000236829 ENTREZGENE
GTEx ENSG00000236829 GTEx
HGNC ID HGNC:14194 ENTREZGENE
Human Proteome Map RPL23AP5 Human Proteome Map
NCBI Gene RPL23AP5 ENTREZGENE
PharmGKB PA34696 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-07 RPL23AP5  ribosomal protein L23a pseudogene 5  Z97634.1  ribosomal protein L23a (RPL23A) pseudogene  Data merged from RGD:16556650 737654 PROVISIONAL