Gm46323 (predicted gene, 46323) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm46323 (predicted gene, 46323) Mus musculus
Analyze
Symbol: Gm46323
Name: predicted gene, 46323
RGD ID: 12796083
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39129,418,242 - 9,465,113 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl129,421,393 - 9,523,930 (+)EnsemblGRCm39 Ensembl
GRCm38129,371,426 - 9,415,113 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl129,371,438 - 9,473,770 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map12A1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm46323
1185 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12821257610451853Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000223136
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,424 - 9,523,930 (+)Ensembl
GRCm38.p6 Ensembl129,371,438 - 9,473,770 (+)Ensembl
Ensembl Acc Id: ENSMUST00000265638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,439 - 9,523,322 (+)Ensembl
Ensembl Acc Id: ENSMUST00000265639
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,400 - 9,465,178 (+)Ensembl
Ensembl Acc Id: ENSMUST00000265640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,423 - 9,465,181 (+)Ensembl
Ensembl Acc Id: ENSMUST00000265641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,393 - 9,429,097 (+)Ensembl
Ensembl Acc Id: ENSMUST00000265642
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,421,393 - 9,423,370 (+)Ensembl
RefSeq Acc Id: XR_001780521
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39129,421,416 - 9,465,113 (+)NCBI
GRCm38129,371,426 - 9,415,113 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004937767
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39129,418,242 - 9,465,113 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000113913 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000265640 ENTREZGENE
MGD MGI:5825960 ENTREZGENE
NCBI Gene Gm46323 ENTREZGENE
PhenoGen Gm46323 PhenoGen
RNAcentral URS0000BD6C13 RNACentral