Gm10476 (predicted gene 10476) - Rat Genome Database

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Gene: Gm10476 (predicted gene 10476) Mus musculus
Analyze
Symbol: Gm10476
Name: predicted gene 10476
RGD ID: 12436846
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like; zinc finger protein 431-like; zinc finger protein 69-like
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391222,293,983 - 22,517,256 (-)NCBIGRCm39GRCm39mm39
GRCm381222,414,375 - 22,467,255 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map12A1.3NCBI
cM Map128.42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Variants

.
Variants in Gm10476
1100 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:242
Count of miRNA genes:206
Interacting mature miRNAs:217
Transcripts:ENSMUST00000173213
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
12792982Fbmd4_mfemoral bone mineral density 4, females only (mouse)121004319424365136Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_036157762   ⟹   XP_036013655
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,497,151 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157763   ⟹   XP_036013656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,483,225 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157764   ⟹   XP_036013657
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,483,225 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157765   ⟹   XP_036013658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,293,983 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157766   ⟹   XP_036013659
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,498,634 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157767   ⟹   XP_036013660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,515,507 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157768   ⟹   XP_036013661
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,464,866 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157769   ⟹   XP_036013662
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,500,515 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157770   ⟹   XP_036013663
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391222,295,775 - 22,517,256 (-)NCBI
Sequence:
RefSeq Acc Id: XP_036013658   ⟸   XM_036157765
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036013663   ⟸   XM_036157770
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036013661   ⟸   XM_036157768
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036013657   ⟸   XM_036157764
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036013656   ⟸   XM_036157763
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036013655   ⟸   XM_036157762
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036013659   ⟸   XM_036157766
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036013662   ⟸   XM_036157769
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036013660   ⟸   XM_036157767
- Peptide Label: isoform X6


Additional Information

Database Acc Id Source(s)
MGD MGI:3779114 ENTREZGENE
NCBI Gene Gm10476 ENTREZGENE
PhenoGen Gm10476 PhenoGen