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Gene: TCHHL1 (trichohyalin like 1) Canis lupus familiaris

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Symbol:

TCHHL1

Name:

trichohyalin like 1

RGD ID:

12335603

Description:

ENCODES a protein that exhibits transition metal ion binding (inferred); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

trichohyalin-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TCHHL1 (trichohyalin like 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Tchhl1 (trichohyalin-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tchhl1 (trichohyalin-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tchhl1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TCHHL1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tchhl1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TCHHL1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TCHHL1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tchhl1 (trichohyalin like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	61,077,129 - 61,081,240 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	61,077,944 - 61,081,233 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	60,521,236 - 60,525,237 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	62,096,590 - 62,100,591 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	62,097,375 - 62,100,577 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	60,923,056 - 60,927,057 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	61,009,250 - 61,013,251 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	61,738,869 - 61,742,871 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

bladder exstrophy-epispadias-cloacal exstrophy complex (ISO)

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

transition metal ion binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TCHHL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	61,077,129 - 61,081,240 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	61,077,944 - 61,081,233 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	60,521,236 - 60,525,237 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	62,096,590 - 62,100,591 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	62,097,375 - 62,100,577 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	60,923,056 - 60,927,057 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	61,009,250 - 61,013,251 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	61,738,869 - 61,742,871 (-)	NCBI		UU_Cfam_GSD_1.0

TCHHL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	152,084,141 - 152,089,064 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	152,084,141 - 152,089,064 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	152,056,617 - 152,061,540 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	150,323,244 - 150,328,164 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	125,171,284 - 125,176,204 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	123,434,550 - 123,439,470 (-)	NCBI		HuRef
CHM1_1	1	153,451,951 - 153,456,871 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	151,207,707 - 151,212,630 (-)	NCBI		T2T-CHM13v2.0

Tchhl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	93,376,061 - 93,379,287 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	93,376,061 - 93,379,287 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	93,468,754 - 93,471,980 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	93,468,754 - 93,471,980 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	93,272,676 - 93,275,902 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	93,554,158 - 93,557,384 (+)	NCBI		MGSCv36	mm8
MGSCv36	3	94,166,544 - 94,169,770 (+)	NCBI		MGSCv36	mm8
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.51	NCBI

Tchhl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	181,818,424 - 181,821,666 (+)	NCBI		GRCr8
mRatBN7.2	2	179,134,941 - 179,138,467 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	179,135,796 - 179,138,202 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	193,807,250 - 193,809,696 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	193,807,281 - 193,809,637 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	211,057,778 - 211,060,137 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	186,558,683 - 186,560,921 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	186,508,788 - 186,511,027 (+)	NCBI
Celera	2	171,148,055 - 171,150,501 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Tchhl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955589	335,920 - 343,206 (+)	NCBI	ChiLan1.0	ChiLan1.0

TCHHL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	97,734,619 - 97,739,541 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	97,485,851 - 97,490,773 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	127,442,837 - 127,447,753 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	131,085,544 - 131,090,456 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	131,085,544 - 131,090,456 (-)	Ensembl	panpan1.1		panPan2

Tchhl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	23,226,987 - 23,231,531 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936580	2,257,376 - 2,262,026 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TCHHL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	97,177,405 - 97,182,540 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	97,176,719 - 97,182,012 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	106,139,258 - 106,143,848 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TCHHL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	11,562,589 - 11,568,863 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	11,123,194 - 11,126,359 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tchhl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624772	19,718,920 - 19,725,594 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TCHHL1
36 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	ectoderm	endocrine system	endoderm	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
1	2	12	7	2	6	5	3	5	11	2

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022405015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038560619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038624646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000035159 ⟹ ENSCAFP00000030385

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	61,077,944 - 61,081,233 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845045230 ⟹ ENSCAFP00845035467

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	62,097,375 - 62,100,577 (-)	Ensembl

RefSeq Acc Id:

XM_022405015 ⟹ XP_022260723

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	61,077,129 - 61,081,240 (-)	NCBI
Dog10K_Boxer_Tasha	17	60,521,236 - 60,525,237 (-)	NCBI

Sequence:

show sequence

CTGTGGGATGGACAGAGAAAAGGATAACCTCAGTATCTCCTTCCTGAAAAAAAATGAACTTTGT
TCTTTCTCACAGTTTCCTGAGTTGGGAAAGATGCCTCGGCTCCTGAGAGATGTCCTCTGTATAA
TCAAGACATTCCACAAGTATGCCCAGGAGGACGGTAACAAGGCAACACTGACCTGTACAGAGCT
GAAACAGCTCATTCAGGGCGAGTTTGGGGACATTCTTCAGCCATATGCCATTCATGCTGTGGAG
AAAAACTTGAACCTTCTGAATATTGACAAGAGCACCATCAGTTTTGATGAATTTGTTCTTGCAA
TCTTCAACCTTTTGAACCTCTGCTATCTTGATATACAATCCTTACTAAAATCAGAACCAAGACA
AGTGTCTAAACCAGAGGAGAAGCCAGATGATCTAGATCTTCAGGTGACCAGTAGCACTGGCCAG
CAGACAGAACAAACTCCACCAACTCAAGACAGAGTGGTACCTCCTTCAGGAATGACATCATCAG
CTCAGCTCAGCTTCGTGGGAAGGGGGGCAGTTGGATACAATGGGGCCAAAAACACCAAGACTTA
CAATCTGCCAGTAGAAGCATCCGGGCGCAATGACCCTGAGAACCAACACCCAGAAGGAGATCAA
TGGAGCCAGGATGTGGCCCAAGATGTATCAGCAACAAGAGACAATGGAGTTCAACTTGAGACAA
ATAAGCTAACAGCAGATTCAGAACAGACTGACAGTCCCACAAAGCAGGAGAGACAGGAAAAGGA
GAGTCCCAGGGAAAGAGATAAACCAGTCAGGGAACAAAGTGACACGAAGAAAAGTGATCGATTT
GGAGAACACGAAGGGAACCTGAGACTCCAAAGTTCTCCACCAGGAAAAACAACAAAGAGGCCTT
CCAAAGATCAGAAAGTTGCAACAGAAAAGGATGTTAAGGAACATTCTAAAACACAAGAACTGTC
GCTGACAGGAAAATATGAGCCCAGTTCAGAGCATACCAATCTACCAGAACAAGCTACTGCCCAG
AAACCATTGCAGACAGAGAAACTAACTGATCCTGACGATGATGGTAGTACATTTGAGACCCAAG
GACAAGGAGAGGATGCCGATAGGACACCACCTGAAACAAAGAATCTAGCTGAATCTGGGGATGA
CAGTAGAGCATCTGAGACCCAAGAACCACCAGCACAAGAAAAAAAACATGAAACAAAGGACCTG
CTTGTCCAAGGTGATATCAGAAATGTTTCAGAAATACCTGATGCTCAAGTTATAAGGAAGAAGA
GGAGAAGCCCTATGGCCCATGGAACAGCAGGGCAGAAAGAAAATGAGAGAAAAATTCAGCTATC
AACCCTGGAAGACCAATCACAGGATGGGAAGTATCAGGAACTCCAAGAGTCATCAAAAGAAAGG
GATGCTGTAGAAGATTCTAAAACACAAGTGTCAAGCTCAGAAGGAGAACAGAACCATTCTGAAA
TTGAAAGAGCAGTCACCCCAGGAGAAGAGGCAAGACATGCTGAGGAAGGCATAGCAGAAGCACG
TATGAGCAGCAAAAACGCCCCTGCAGCAGAAGAGACACCAGGAGCAAGAGAAAGAACACAAGAC
TTAGCACCACTCAAGAACCCGTCTGGAGAAGAAAATGAGAATGTCACCAAGACTCATGACAAGC
CAGTCAAGGAGGATGTTGGTTATCTGGGAGAGGATCCCGAGGCCACAATCACACAGAATAATGA
GAGTTTTTGGGAAATTCCCAATAGCCTTACTCCAGAGGATGGTGACAACAGCTCAGAGACAACT
GATCCACCTGTGCAAGGAGATTCCCAGAATAAAGTAGACCCTCTTAGAGAGTCTATGGAAAGAA
GTCACAATAATAACCCAGACACTAAGAAACAGGTAGCACTGGGTGAGGAAAGCAGAACTCAGGA
GGCAGTGGTGCTGGAAGTCAGAGGAGAAGATAAGCTCACCGAGGAATCAGAATGGGCTGCCAGA
GAAGAGTACAGGAGTCAGGGCTTAGGGACCAAAGACCAAGGTCCAGCTGTGCACCCTGATGGAC
ATCCAGAAGCACAGAAGTCCATATCAAGAGGAGAAAACAGAAAGTCCCTTGAGACAGAGATCCC
AGGTACACTGGAGGCAGATGTCACTGACCAGTCTTCCATAAGACAGCTTTCAGCAGAGGAAGAC
AGCAGAAAAAAGTTAAAGGCACAGAGCCCAAGTACCAAAGGAGAGGAAAGTAGAGCACAGGAGA
CCCAGGAGGCTCCAGTAAAAAATCTGGATGACAATTCAGCCTCCTCCAAAGCACACTTTGAAAG
AGATGAACCTGCAACATTAGAGGAGGATGAAGGCCCCCAATATTTGGCAGGAGAAGCCAATGAC
CAACAAAATCCAGCCAAGAAAGGATATGATGTTTCAGTCCCCCAGTCAAGCCTTGTAGAGAAGA
TGCAGATGGACCAAGAATCTGGTTCTGTGGAGAGAAGTACAATCTATTCCAGTCCTCTGTACCA
GTACCTGCAAGAGAAGATACTGCAACAAATGGATATGACCCCAGTGGAGCAGCAAAATCAAGCT
CTGTCAGCTAGAGCGTCAAGCCCAGAGCTCCTCAACAACCAGTCAAGTGCATCCCTCACCAGTG
AGGGCTCAGATTGTCCCATCATCTTCAGTGACAGCCAAGCATTACAATATTACAACTGGGAACA
TCTGCCTGATGCAGATCCTTCTGATGCACAGCAAACATCAGCTCCCCAAGCCTCAGATATGCAG
GGCCACCCTCAGGAAAAGAAATCAGTACTACAAAGGGAGGCAAGCACCAAAAAGCAGTGAATCA
TTATGATCCCAGAAGAAATTCCAAGGAACTTCATACATCTCAACATGTCCCAGACTTCTTCCCT
CCCAATCACCCTCAATGCTCACATGCACACATTGAGAAGCAAATTAATAATTCTTTAAATTCCT
TTCCTAGATCTCTACAAAAGCAAATAAGGAAGTATTCAGCAGTGGGAGATGCCACCAAAGAAAT
ATCACACCAAAAATCCTACCATATGATGATACTTCCAAGTACCAAAATGGATTTTCTCATGAGA
CAGTTTTTCACAATTTACCTGTCATTAGGAATAGGAAAAAAATCCTTTCATATCTTTAACATAT
GTCGATTTCTTCAATTGATTTGTTGGCTTTTTATAATGTGGCTATAGTGAGTATGAGACTCTGC
AATACCACCCCCATAAAATAAAATTAATTCATATATGCCAATTATTCTGCTTCATGACATTTCC
TAACAGAGTTCAAGTTTATCCTAAAATTTTATCCTTCAAGACAATCTCAGATATCACCATAACA
TAAAATAATTATGACTTTCTAGCACCCAATCAGAGTAGATTCATGACTCTTTGTTAATGTCCAG
GTGCAACTAAATTATGCCACAGATTCATTCATTCATTCCTTTAAATCCCACTCCTTACACAGTG
TTTTCAAAGCTTCTGGCTCAAATAAGCAAGAATAATTATGAAGGAGACACAGAATGTAAATCTA
ATGTATGTTTCATTCCATAAGAAGCTCTTATAACCAATGCTCCACTAAGCCTACAAAATGTTTA
CCTATATGGTTTGTTGACAGTAATGTGGAAAAAGTAGGAAATA

hide sequence

RefSeq Acc Id:

XM_038499923 ⟹ XP_038355851

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	60,923,056 - 60,927,057 (-)	NCBI

RefSeq Acc Id:

XM_038560619 ⟹ XP_038416547

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	61,738,869 - 61,742,871 (-)	NCBI

RefSeq Acc Id:

XM_038624646 ⟹ XP_038480574

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	61,009,250 - 61,013,251 (-)	NCBI

RefSeq Acc Id:

XM_038690550 ⟹ XP_038546478

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	62,096,590 - 62,100,591 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022260723	(Get FASTA)	NCBI Sequence Viewer
	XP_038355851	(Get FASTA)	NCBI Sequence Viewer
	XP_038416547	(Get FASTA)	NCBI Sequence Viewer
	XP_038480574	(Get FASTA)	NCBI Sequence Viewer
	XP_038546478	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000030385.3
	ENSCAFP00030017859.1
	ENSCAFP00040018618.1
	ENSCAFP00845035467
	ENSCAFP00845035467.1

RefSeq Acc Id:

XP_022260723 ⟸ XM_022405015

- UniProtKB:

A0A8C0MZG0 (UniProtKB/TrEMBL), A0A8P0NLI1 (UniProtKB/TrEMBL), A0A8C0SAN3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDREKDNLSISFLKKNELCSFSQFPELGKMPRLLRDVLCIIKTFHKYAQEDGNKATLTCTELKQ
LIQGEFGDILQPYAIHAVEKNLNLLNIDKSTISFDEFVLAIFNLLNLCYLDIQSLLKSEPRQVS
KPEEKPDDLDLQVTSSTGQQTEQTPPTQDRVVPPSGMTSSAQLSFVGRGAVGYNGAKNTKTYNL
PVEASGRNDPENQHPEGDQWSQDVAQDVSATRDNGVQLETNKLTADSEQTDSPTKQERQEKESP
RERDKPVREQSDTKKSDRFGEHEGNLRLQSSPPGKTTKRPSKDQKVATEKDVKEHSKTQELSLT
GKYEPSSEHTNLPEQATAQKPLQTEKLTDPDDDGSTFETQGQGEDADRTPPETKNLAESGDDSR
ASETQEPPAQEKKHETKDLLVQGDIRNVSEIPDAQVIRKKRRSPMAHGTAGQKENERKIQLSTL
EDQSQDGKYQELQESSKERDAVEDSKTQVSSSEGEQNHSEIERAVTPGEEARHAEEGIAEARMS
SKNAPAAEETPGARERTQDLAPLKNPSGEENENVTKTHDKPVKEDVGYLGEDPEATITQNNESF
WEIPNSLTPEDGDNSSETTDPPVQGDSQNKVDPLRESMERSHNNNPDTKKQVALGEESRTQEAV
VLEVRGEDKLTEESEWAAREEYRSQGLGTKDQGPAVHPDGHPEAQKSISRGENRKSLETEIPGT
LEADVTDQSSIRQLSAEEDSRKKLKAQSPSTKGEESRAQETQEAPVKNLDDNSASSKAHFERDE
PATLEEDEGPQYLAGEANDQQNPAKKGYDVSVPQSSLVEKMQMDQESGSVERSTIYSSPLYQYL
QEKILQQMDMTPVEQQNQALSARASSPELLNNQSSASLTSEGSDCPIIFSDSQALQYYNWEHLP
DADPSDAQQTSAPQASDMQGHPQEKKSVLQREASTKKQ

hide sequence

Ensembl Acc Id:

ENSCAFP00000030385 ⟸ ENSCAFT00000035159

RefSeq Acc Id:

XP_038355851 ⟸ XM_038499923

RefSeq Acc Id:

XP_038480574 ⟸ XM_038624646

RefSeq Acc Id:	XP_038546478 ⟸ XM_038690550
- UniProtKB:	A0A8I3PLW0 (UniProtKB/TrEMBL), A0A8C0SAN3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038416547 ⟸ XM_038560619
- UniProtKB:	A0A8C0MZG0 (UniProtKB/TrEMBL), A0A8C0SAN3 (UniProtKB/TrEMBL), A0A8P0NLI1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845035467 ⟸ ENSCAFT00845045230

Protein Domains

S100/CaBP-9k-type calcium binding subdomain

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012944	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011063	UniProtKB/TrEMBL
	ENSCAFG00040011615	UniProtKB/TrEMBL
	ENSCAFG00845025618	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000035159.3	UniProtKB/TrEMBL
	ENSCAFT00030020474.1	UniProtKB/TrEMBL
	ENSCAFT00040021443.1	UniProtKB/TrEMBL
	ENSCAFT00845045230	ENTREZGENE
	ENSCAFT00845045230.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	EF-hand-dom_pair	UniProtKB/TrEMBL
	S-100_dom	UniProtKB/TrEMBL
	S100_Ca-bd_sub	UniProtKB/TrEMBL
	TCHHL1	UniProtKB/TrEMBL
NCBI Gene	TCHHL1	ENTREZGENE
PANTHER	PTHR47612	UniProtKB/TrEMBL
	TRICHOHYALIN-LIKE PROTEIN 1	UniProtKB/TrEMBL
Pfam	S_100	UniProtKB/TrEMBL
SMART	S_100	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8C0MZG0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SAN3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PLW0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NLI1	ENTREZGENE
UniProt Secondary	A0A8P0NLI1	UniProtKB/TrEMBL
VGNC ID	VGNC:47201	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar