KLRG2 (killer cell lectin like receptor G2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: KLRG2 (killer cell lectin like receptor G2) Canis lupus familiaris
Analyze
Symbol: KLRG2
Name: killer cell lectin like receptor G2
RGD ID: 12163109
Description: ENCODES a protein that exhibits carbohydrate binding (inferred); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); RASopathy (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: killer cell lectin-like receptor subfamily G member 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1169,308,506 - 9,323,005 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1610,147,742 - 10,164,613 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0169,225,469 - 9,242,082 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl169,210,814 - 9,242,524 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1169,175,980 - 9,192,632 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0169,020,064 - 9,036,563 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0169,091,102 - 9,107,712 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
KLRG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1169,308,506 - 9,323,005 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1610,147,742 - 10,164,613 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0169,225,469 - 9,242,082 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl169,210,814 - 9,242,524 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1169,175,980 - 9,192,632 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0169,020,064 - 9,036,563 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0169,091,102 - 9,107,712 (+)NCBIUU_Cfam_GSD_1.0
KLRG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387139,427,098 - 139,483,673 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7139,452,690 - 139,483,673 (-)EnsemblGRCh38hg38GRCh38
GRCh377139,137,436 - 139,168,419 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367138,788,628 - 138,818,997 (-)NCBINCBI36Build 36hg18NCBI36
Celera7133,876,259 - 133,906,629 (-)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7133,447,971 - 133,478,537 (-)NCBIHuRef
CHM1_17139,072,282 - 139,102,632 (-)NCBICHM1_1
T2T-CHM13v2.07140,740,393 - 140,796,968 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27138,482,632 - 138,513,003 (-)NCBI
Klrg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39638,593,264 - 38,615,750 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl638,602,628 - 38,614,177 (-)EnsemblGRCm39 Ensembl
GRCm38638,616,329 - 38,638,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl638,625,693 - 38,637,242 (-)EnsemblGRCm38mm10GRCm38
MGSCv37638,576,660 - 38,587,239 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36638,556,268 - 38,566,841 (-)NCBIMGSCv36mm8
Celera638,607,614 - 38,618,192 (-)NCBICelera
Cytogenetic Map6B1NCBI
cM Map617.85NCBI
Klrg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8468,314,347 - 68,341,759 (-)NCBIGRCr8
mRatBN7.2467,360,216 - 67,374,867 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl467,363,919 - 67,374,147 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0466,370,674 - 66,381,351 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl466,371,511 - 66,380,734 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0466,181,601 - 66,192,056 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4466,199,037 - 66,208,260 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera462,381,539 - 62,392,214 (-)NCBICelera
Cytogenetic Map4q23NCBI
KLRG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26176,248,545 - 176,287,350 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1728,258,798 - 28,297,582 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07131,399,485 - 131,431,598 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17143,883,389 - 143,915,177 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7143,884,701 - 143,915,138 (-)Ensemblpanpan1.1panPan2
Klrg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511815,479,380 - 15,494,787 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365923,725,016 - 3,740,262 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLRG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1810,213,758 - 10,234,121 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11810,213,477 - 10,233,562 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21810,699,741 - 10,719,654 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KLRG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121108,197,801 - 108,235,999 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21108,198,147 - 108,235,749 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366615612,891 - 198,341 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Klrg2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476519,852,319 - 19,874,544 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KLRG2
129 total Variants

Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00845055270   ⟹   ENSCAFP00845043472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl169,210,814 - 9,242,524 (+)Ensembl
RefSeq Acc Id: XM_038452476   ⟹   XP_038308404
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1610,147,742 - 10,164,613 (+)NCBI
RefSeq Acc Id: XM_038497080   ⟹   XP_038353008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1169,175,980 - 9,192,632 (+)NCBI
RefSeq Acc Id: XM_038559419   ⟹   XP_038415347
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0169,091,102 - 9,107,712 (+)NCBI
RefSeq Acc Id: XM_038623399   ⟹   XP_038479327
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0169,020,064 - 9,036,563 (+)NCBI
RefSeq Acc Id: XM_038689118   ⟹   XP_038545046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0169,225,469 - 9,242,082 (+)NCBI
RefSeq Acc Id: XP_038353008   ⟸   XM_038497080
RefSeq Acc Id: XP_038479327   ⟸   XM_038623399
RefSeq Acc Id: XP_038545046   ⟸   XM_038689118
- UniProtKB: A0A8C0LCB9 (UniProtKB/TrEMBL),   A0A8I3QWC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308404   ⟸   XM_038452476
- UniProtKB: A0A8C0LCB9 (UniProtKB/TrEMBL),   A0A8I3QWC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415347   ⟸   XM_038559419
- UniProtKB: A0A8C0LCB9 (UniProtKB/TrEMBL),   A0A8I3QWC5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845043472   ⟸   ENSCAFT00845055270
Protein Domains
C-type lectin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000050980 UniProtKB/TrEMBL
  ENSCAFG00030005582 UniProtKB/TrEMBL
  ENSCAFG00845031090 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000096964.1 UniProtKB/TrEMBL
  ENSCAFT00000100253.1 UniProtKB/TrEMBL
  ENSCAFT00030010211.1 UniProtKB/TrEMBL
  ENSCAFT00845055270 ENTREZGENE
  ENSCAFT00845055270.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/TrEMBL
  CTDL_fold UniProtKB/TrEMBL
  KLRG2 UniProtKB/TrEMBL
  NKR-like_CTLD UniProtKB/TrEMBL
NCBI Gene KLRG2 ENTREZGENE
PANTHER KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY G MEMBER 2 UniProtKB/TrEMBL
  PTHR47606 UniProtKB/TrEMBL
Pfam Lectin_C UniProtKB/TrEMBL
PROSITE C_TYPE_LECTIN_2 UniProtKB/TrEMBL
SMART CLECT UniProtKB/TrEMBL
Superfamily-SCOP SSF56436 UniProtKB/TrEMBL
UniProt A0A8C0LCB9 ENTREZGENE
  A0A8C0MID2_CANLF UniProtKB/TrEMBL
  A0A8I3QWC5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PH84_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0PN58 UniProtKB/TrEMBL