LOC100986779 (olfactory receptor 52E4) - Rat Genome Database

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Pathways
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Gene: LOC100986779 (olfactory receptor 52E4) Pan paniscus
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Symbol: LOC100986779 (Ensembl: OR52E4)
Name: olfactory receptor 52E4 (Ensembl:olfactory receptor family 52 subfamily E member 4)
RGD ID: 11980376
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v298,320,002 - 8,326,461 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1118,277,658 - 8,284,136 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0116,019,621 - 6,020,638 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,700,781 - 5,701,798 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,700,797 - 5,701,735 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_057299080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000021939   ⟹   ENSPPAP00000004800
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl115,700,797 - 5,701,735 (+)Ensembl
RefSeq Acc Id: XM_057299080   ⟹   XP_057155063
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v298,320,002 - 8,326,461 (+)NCBI
NHGRI_mPanPan1118,277,658 - 8,284,136 (+)NCBI
Protein Sequences
Protein RefSeqs XP_057155063 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004800.1
Ensembl Acc Id: ENSPPAP00000004800   ⟸   ENSPPAT00000021939
RefSeq Acc Id: XP_057155063   ⟸   XM_057299080
- UniProtKB: A0A2R8ZLI6 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000020009 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000021939.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100986779 ENTREZGENE
PANTHER OLFACTORY RECEPTOR 52E4 UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R8ZLI6 ENTREZGENE, UniProtKB/TrEMBL