LOC100976465 (hemoglobin subunit beta) - Rat Genome Database

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Gene: LOC100976465 (hemoglobin subunit beta) Pan paniscus
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Symbol: LOC100976465 (Ensembl: HBB)
Name: hemoglobin subunit beta
RGD ID: 11899988
Description: ENCODES a protein that exhibits haptoglobin binding (inferred); heme binding (inferred); hemoglobin alpha binding (inferred); INVOLVED IN cellular oxidant detoxification (inferred); hydrogen peroxide catabolic process (inferred); nitric oxide transport (inferred); FOUND IN blood microparticle (inferred); extracellular space (inferred); haptoglobin-hemoglobin complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Beta-globin; HBB; Hemoglobin beta chain; hemoglobin, beta
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v297,661,830 - 7,663,452 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1117,619,318 - 7,620,940 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,374,486 - 5,376,111 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,043,095 - 5,044,826 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,043,095 - 5,044,826 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:6406908   PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003819029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000021208   ⟹   ENSPPAP00000004625
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl115,043,095 - 5,044,826 (-)Ensembl
RefSeq Acc Id: XM_003819029   ⟹   XP_003819077
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v297,661,830 - 7,663,452 (-)NCBI
NHGRI_mPanPan1117,619,318 - 7,620,940 (-)NCBI
Mhudiblu_PPA_v0115,374,486 - 5,376,111 (-)NCBI
PanPan1.1115,043,095 - 5,044,826 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003819077 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004625
  ENSPPAP00000004625.1
GenBank Protein P68872 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_003819077   ⟸   XM_003819029
- UniProtKB: P68872 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSPPAP00000004625   ⟸   ENSPPAT00000021208
Protein Domains
GLOBIN


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000019351 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSPPAT00000021208.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.490.10 UniProtKB/Swiss-Prot
InterPro Globin UniProtKB/Swiss-Prot
  Globin-like_sf UniProtKB/Swiss-Prot
  Globin/Proto UniProtKB/Swiss-Prot
  Haemoglobin_b UniProtKB/Swiss-Prot
  Hemoglobin_oxygen_transport UniProtKB/Swiss-Prot
KEGG Report pps:100976465 UniProtKB/Swiss-Prot
NCBI Gene LOC100976465 ENTREZGENE
PANTHER HEMOGLOBIN FAMILY MEMBER UniProtKB/Swiss-Prot
  HEMOGLOBIN SUBUNIT BETA UniProtKB/Swiss-Prot
Pfam Globin UniProtKB/Swiss-Prot
PRINTS BETAHAEM UniProtKB/Swiss-Prot
PROSITE GLOBIN UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46458 UniProtKB/Swiss-Prot
UniProt HBB_PANPA UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary P02023 UniProtKB/Swiss-Prot
  Q13852 UniProtKB/Swiss-Prot
  Q14481 UniProtKB/Swiss-Prot
  Q14510 UniProtKB/Swiss-Prot
  Q9BX96 UniProtKB/Swiss-Prot
  Q9UCP8 UniProtKB/Swiss-Prot
  Q9UCP9 UniProtKB/Swiss-Prot