LOC100976125 (olfactory receptor 51V1) - Rat Genome Database

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Gene: LOC100976125 (olfactory receptor 51V1) Pan paniscus
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Symbol: LOC100976125 (Ensembl: OR51V1)
Name: olfactory receptor 51V1 (Ensembl:olfactory receptor family 51 subfamily V member 1)
RGD ID: 11717215
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); ASSOCIATED WITH delta beta-thalassemia (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v297,635,800 - 7,637,040 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1117,593,280 - 7,594,520 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,348,456 - 5,349,696 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,017,362 - 5,018,327 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,017,362 - 5,018,327 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC100976125
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v297,635,800 - 7,637,040 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1117,593,280 - 7,594,520 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,348,456 - 5,349,696 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,017,362 - 5,018,327 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,017,362 - 5,018,327 (-)Ensemblpanpan1.1panPan2
OR51V1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38115,199,735 - 5,200,682 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl115,199,735 - 5,200,682 (-)EnsemblGRCh38hg38GRCh38
GRCh37115,220,965 - 5,221,912 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36115,177,541 - 5,178,506 (-)NCBINCBI36Build 36hg18NCBI36
Build 34115,177,540 - 5,178,506NCBI
Celera115,339,640 - 5,340,605 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef114,880,139 - 4,881,104 (-)NCBIHuRef
CHM1_1115,219,865 - 5,220,830 (-)NCBICHM1_1
T2T-CHM13v2.0115,259,088 - 5,260,035 (-)NCBIT2T-CHM13v2.0
Or51v8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397103,319,310 - 103,320,236 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7103,314,668 - 103,320,398 (-)EnsemblGRCm39 Ensembl
GRCm387103,670,103 - 103,671,029 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7103,665,461 - 103,671,191 (-)EnsemblGRCm38mm10GRCm38
MGSCv377110,818,617 - 110,819,543 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367103,543,924 - 103,544,850 (-)NCBIMGSCv36mm8
Celera7104,039,501 - 104,040,430 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map754.85NCBI
Or51v8b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81167,399,672 - 167,400,616 (-)NCBIGRCr8
mRatBN7.21157,987,781 - 157,988,725 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1157,987,781 - 157,988,725 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1165,957,769 - 165,958,713 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01173,137,780 - 173,138,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01166,025,989 - 166,026,933 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01168,709,516 - 168,710,460 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1168,709,516 - 168,710,460 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01174,877,833 - 174,878,777 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41161,347,591 - 161,348,535 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11161,427,336 - 161,428,281 (-)NCBI
Celera1156,026,187 - 156,027,131 (-)NCBICelera
Cytogenetic Map1q32NCBI
OR51V20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12128,137,556 - 28,138,506 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
ROS_Cfam_1.02128,854,707 - 28,855,659 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2128,854,716 - 28,855,680 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12128,195,989 - 28,196,939 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02128,422,881 - 28,423,831 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02128,561,727 - 28,562,677 (-)NCBIUU_Cfam_GSD_1.0
LOC100621181
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl94,790,931 - 4,791,869 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.194,790,886 - 4,791,845 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.295,623,308 - 5,624,267 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103247909
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1161,574,558 - 61,577,351 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604364,375,879 - 64,376,739 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003819028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000013126   ⟹   ENSPPAP00000002766
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl115,017,362 - 5,018,327 (-)Ensembl
RefSeq Acc Id: XM_003819028   ⟹   XP_003819076
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v297,635,800 - 7,637,040 (-)NCBI
NHGRI_mPanPan1117,593,280 - 7,594,520 (-)NCBI
Mhudiblu_PPA_v0115,348,456 - 5,349,696 (-)NCBI
PanPan1.1115,017,362 - 5,018,327 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003819076 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000002766.1
RefSeq Acc Id: XP_003819076   ⟸   XM_003819028
- UniProtKB: A0A2R8ZCH7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000002766   ⟸   ENSPPAT00000013126
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000012096 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000013126.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_rcpt UniProtKB/TrEMBL
KEGG Report pps:100976125 UniProtKB/TrEMBL
NCBI Gene LOC100976125 ENTREZGENE
PANTHER OLFACTORY RECEPTOR 51V1 UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R8ZCH7 ENTREZGENE, UniProtKB/TrEMBL