Gm14846 (predicted gene 14846) - Rat Genome Database

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Gene: Gm14846 (predicted gene 14846) Mus musculus
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Symbol: Gm14846
Name: predicted gene 14846
RGD ID: 11576834
MGI Page MGI
Description:
Type: protein-coding (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: small nuclear ribonucleoprotein G-like
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X73,322,260 - 73,322,505 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX73,322,260 - 73,322,475 (+)EnsemblGRCm39 Ensembl
GRCm38X74,278,654 - 74,278,899 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX74,278,654 - 74,278,869 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXA7.3NCBI
cM MapX37.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm14846
5 total Variants

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:84
Interacting mature miRNAs:93
Transcripts:ENSMUST00000121868
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse

1 to 10 of 16 rows





RefSeq Transcripts XM_036162142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL807376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000121868
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX73,322,260 - 73,322,475 (+)Ensembl
GRCm38.p6 EnsemblX74,278,654 - 74,278,869 (+)Ensembl
RefSeq Acc Id: XM_036162142   ⟹   XP_036018035
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X73,322,260 - 73,322,505 (+)NCBI
Sequence:
Protein RefSeqs XP_036018035 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_036018035   ⟸   XM_036162142



Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000084271 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000121868 ENTREZGENE
MGD MGI:3705595 ENTREZGENE
NCBI Gene Gm14846 ENTREZGENE
PhenoGen Gm14846 PhenoGen