Gm12095 (predicted gene 12095) - Rat Genome Database

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Gene: Gm12095 (predicted gene 12095) Mus musculus
Analyze
Symbol: Gm12095
Name: predicted gene 12095
RGD ID: 11576706
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391129,932,073 - 29,935,318 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1129,932,414 - 29,933,229 (+)EnsemblGRCm39 Ensembl
GRCm381129,982,073 - 29,983,372 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1129,982,414 - 29,983,229 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map11A3.3NCBI
cM Map1117.23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm12095
138 total Variants

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:42
Interacting mature miRNAs:42
Transcripts:ENSMUST00000121962
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 59 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse

1 to 10 of 59 rows





GenBank Nucleotide BX005100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000121962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,932,414 - 29,933,229 (+)Ensembl
GRCm38.p6 Ensembl1129,982,414 - 29,983,229 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000080906 Ensembl
MGD MGI:3651296 ENTREZGENE
NCBI Gene Gm12095 ENTREZGENE
PhenoGen Gm12095 PhenoGen