Gm14321 (predicted gene 14321) - Rat Genome Database

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Gene: Gm14321 (predicted gene 14321) Mus musculus
Analyze
Symbol: Gm14321
Name: predicted gene 14321
RGD ID: 11082787
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392167,619,411 - 167,625,419 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2167,619,384 - 167,638,207 (+)EnsemblGRCm39 Ensembl
GRCm382167,777,491 - 167,783,499 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2167,777,467 - 167,782,569 (+)EnsemblGRCm38mm10GRCm38
Celera2173,718,275 - 173,724,190 (+)NCBICelera
Cytogenetic Map2H3NCBI
cM Map287.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:12466851   PMID:17967808   PMID:18799693   PMID:24200680   PMID:24316575   PMID:27899360  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:346
Count of miRNA genes:268
Interacting mature miRNAs:283
Transcripts:ENSMUST00000127441, ENSMUST00000139927
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1301378Hpdty_mhindlimb polydactyly (mouse)Not determined2165664893168623678Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
12910800Pwgrq3_mpre-weaning growth rate QTL 3 (mouse)2160611165169794802Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164515154181755017Mouse
1558991Tailq4_mtail length QTL 4 (mouse)Not determined2162736926178442452Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
12910810Pwbwq2_mpre-weaning body weight QTL 2 (mouse)2160611165169794802Mouse
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162433493181755017Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
1357435Epfq2_mepididymal fat pad weight QTL 2 (mouse)Not determined2162736926178442452Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163486407181755017Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163486407181755017Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000124850
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,623,973 - 167,625,406 (+)Ensembl
Ensembl Acc Id: ENSMUST00000127441
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,456 - 167,624,046 (+)Ensembl
GRCm38.p6 Ensembl2167,777,536 - 167,782,126 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139927
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,387 - 167,625,419 (+)Ensembl
GRCm38.p6 Ensembl2167,777,467 - 167,782,569 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,389 - 167,638,207 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,401 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,407 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,411 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,411 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,413 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,413 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,440 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,441 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,440 - 167,624,844 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308281
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,445 - 167,622,740 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308282
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,389 - 167,621,117 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308283
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,411 - 167,621,020 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308284
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,637,715 - 167,638,202 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308573
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,384 - 167,625,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000308574
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2167,619,395 - 167,625,419 (+)Ensembl
RefSeq Acc Id: NR_166468
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392167,619,411 - 167,625,419 (+)NCBI
GRCm382167,777,491 - 167,783,499 (+)NCBI
Sequence:
Promoters
RGD ID:15092467
Promoter ID:EPDNEWNC_M378
Type:multiple initiation site
Name:Gm14321_1
Description:predicted gene 14321 [Source:MGI Symbol;Acc:MGI:3701951]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382167,777,486 - 167,777,546EPDNEWNC
RGD ID:6879818
Promoter ID:EPDNEW_M3360
Type:multiple initiation site
Name:KY467917_1
Description:n/a
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382167,777,491 - 167,777,551EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000084797 Ensembl
  ENSMUSG00000087624 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000308574 ENTREZGENE
MGD MGI:3701951 ENTREZGENE
NCBI Gene Gm14321 ENTREZGENE
PhenoGen Gm14321 PhenoGen
RNAcentral URS0001980ECA RNACentral