Gm39486 (predicted gene, 39486) - Rat Genome Database

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Gene: Gm39486 (predicted gene, 39486) Mus musculus
Analyze
Symbol: Gm39486
Name: predicted gene, 39486
RGD ID: 10023659
MGI Page MGI
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,048,416 - 120,056,269 (-)NCBIGRCm39GRCm39mm39
GRCm3811120,157,590 - 120,165,441 (-)NCBIGRCm38GRCm38mm10GRCm38
Celera11131,893,093 - 131,899,781 (-)NCBICelera
Cytogenetic Map11E2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm39486
321 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_003949832
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,055,467 (-)NCBI
GRCm3811120,157,590 - 120,164,641 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949833
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,420 - 120,055,467 (-)NCBI
GRCm3811120,157,594 - 120,164,641 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949834
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,055,467 (-)NCBI
GRCm3811120,157,590 - 120,164,641 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949835
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,056,267 (-)NCBI
GRCm3811120,157,590 - 120,165,441 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949836
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,055,464 (-)NCBI
GRCm3811120,157,590 - 120,164,638 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949837
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,056,269 (-)NCBI
GRCm3811120,157,590 - 120,164,828 (-)NCBI
Sequence:
RefSeq Acc Id: XR_880357
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911120,048,416 - 120,055,467 (-)NCBI
GRCm3811120,157,590 - 120,164,641 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000142728 ENTREZGENE
Ensembl Transcript ENSMUST00000372900 ENTREZGENE
MGD MGI:5622371 ENTREZGENE
NCBI Gene Gm39486 ENTREZGENE
PhenoGen Gm39486 PhenoGen