Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking SDHB and gastrointestinal stromal tumor in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SDHB (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 972 RGD objects have been annotated to gastrointestinal stromal tumor  (DOID:9253)
  • 0 papers in RGD have been used to annotate SDHB
  • Curation Notes: ClinVar Annotator: match by term: Gastrointestinal Stromal Sarcoma | ClinVar Annotator: match by term: Gastrointestinal stroma tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor, somatic
  • Original References(s): PMID:30487145 PMID:30549360 PMID:30694796 PMID:30877234 PMID:31046099 PMID:31104306 PMID:31194233 PMID:31216007 PMID:31492822 PMID:31666924 PMID:31780696 PMID:31883676 PMID:32023584 PMID:32035780 PMID:32124427 PMID:32460727 PMID:32659967 PMID:32741965 PMID:32863293 PMID:32963463 PMID:32971818 PMID:33219105 PMID:33300499 PMID:33362715 PMID:33397040 PMID:33558524 PMID:33628464 PMID:34052969 PMID:34072806 PMID:34255389 PMID:34309460 PMID:34377882 PMID:34439168 PMID:34452955 PMID:34906457 PMID:34939938 PMID:34940133 PMID:35060925 PMID:35171114 PMID:35460558 PMID:36200007 PMID:37529773 PMID:490809 PMID:7143317 PMID:9509062 PMID:9536098


    • An association has been curated linking SDHB and gastrointestinal stromal tumor in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with SDHB (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 972 RGD objects have been annotated to gastrointestinal stromal tumor  (DOID:9253)
  • 0 papers in RGD have been used to annotate SDHB


    • An association has been curated linking SDHB and gastrointestinal stromal tumor in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SDHB (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 972 RGD objects have been annotated to gastrointestinal stromal tumor  (DOID:9253)
  • 0 papers in RGD have been used to annotate SDHB
  • Curation Notes: ClinVar Annotator: match by term: Gastrointestinal Stromal Sarcoma | ClinVar Annotator: match by term: Gastrointestinal stroma tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor of small intestine | ClinVar Annotator: match by term: Gastrointestinal stromal tumor, somatic
  • Original References(s): PMID:11404820 PMID:11897817 PMID:12000816 PMID:12213855 PMID:12362046 PMID:12364472 PMID:12560550 PMID:12618761 PMID:12807974 PMID:13129931 PMID:14500403 PMID:14685938 PMID:14715873 PMID:14974914 PMID:14985401 PMID:15235042 PMID:15328326 PMID:15473885 PMID:15476441 PMID:15531530 PMID:15987702 PMID:15988378 PMID:15989954 PMID:16080530 PMID:16103922 PMID:16199547 PMID:16258955 PMID:16288654 PMID:16304664 PMID:16314641 PMID:16317055 PMID:16322339 PMID:16405730 PMID:16472267 PMID:16912137 PMID:16916404 PMID:16982587 PMID:17102082 PMID:17102083 PMID:17102084 PMID:17102086 PMID:17143317 PMID:17200167 PMID:17298551 PMID:17308434 PMID:17376234 PMID:17487275 PMID:17538171 PMID:17576681 PMID:17634472 PMID:17639058 PMID:17652212 PMID:17667967 PMID:17804857 PMID:17848412 PMID:17884808 PMID:17943698 PMID:17987308 PMID:18057081 PMID:18362451 PMID:18382370 PMID:18419787 PMID:18519664 PMID:18551016 PMID:18678321 PMID:18728283 PMID:18753105 PMID:18840642 PMID:19001511 PMID:19029228 PMID:19064958 PMID:19075037 PMID:19184535 PMID:19189136 PMID:19208735 PMID:19215943 PMID:19258401 PMID:19261679 PMID:19261994 PMID:19351833 PMID:19368708 PMID:19389109 PMID:19393419 PMID:19399650 PMID:19411806 PMID:19415531 PMID:19454582 PMID:19522823 PMID:19576851 PMID:19596260 PMID:19694205 PMID:19763152 PMID:19763184 PMID:19802898 PMID:19825962 PMID:19927285 PMID:20119652 PMID:20208144 PMID:20213850 PMID:20307669 PMID:20379037 PMID:20418362 PMID:20459544 PMID:20503330 PMID:20505258 PMID:20540712 PMID:20583550 PMID:20592014 PMID:20605972 PMID:20614293 PMID:20702724 PMID:20890271 PMID:20923864 PMID:20960097 PMID:21172883 PMID:21173220 PMID:21348866 PMID:21520333 PMID:21561462 PMID:21565294 PMID:21686655 PMID:21784903 PMID:21820839 PMID:21822798 PMID:21909610 PMID:21934479 PMID:21979946 PMID:22041710 PMID:22109755 PMID:22241717 PMID:22270996 PMID:22293219 PMID:22406018 PMID:22429592 PMID:22430264 PMID:22492777 PMID:22517554 PMID:22517557 PMID:22566194 PMID:22573489 PMID:22677546 PMID:22703879 PMID:22829200 PMID:22835832 PMID:22904323 PMID:22972948 PMID:22995128 PMID:22995991 PMID:23072324 PMID:2308387 PMID:23083876 PMID:23154831 PMID:23175444 PMID:23282968 PMID:23318864 PMID:23404858 PMID:23407919 PMID:23434467 PMID:23512077 PMID:23612575 PMID:23640968 PMID:23660872 PMID:23666964 PMID:23735539 PMID:23757202 PMID:23780556 PMID:23797725 PMID:23833252 PMID:23902947 PMID:23934599 PMID:24033266 PMID:24055113 PMID:24092654 PMID:24096523 PMID:24102379 PMID:24134185 PMID:24276837 PMID:24395865 PMID:24436918 PMID:24466223 PMID:24509376 PMID:24523625 PMID:24606901 PMID:24623741 PMID:24659481 PMID:24728327 PMID:24758379 PMID:24781345 PMID:24939699 PMID:24977658 PMID:25025441 PMID:25047027 PMID:25130709 PMID:25151137 PMID:25215250 PMID:25298897 PMID:25326637 PMID:25333069 PMID:25371406 PMID:25394176 PMID:25405498 PMID:25494863 PMID:25595276 PMID:25637381 PMID:25640679 PMID:25683602 PMID:25694510 PMID:25695889 PMID:25720320 PMID:25736212 PMID:25741868 PMID:25791839 PMID:25873086 PMID:25972245 PMID:25987131 PMID:26092435 PMID:26096992 PMID:26102504 PMID:26173966 PMID:26198225 PMID:26236513 PMID:26259135 PMID:26267327 PMID:26269449 PMID:26273102 PMID:26283294 PMID:26302408 PMID:26332594 PMID:26467025 PMID:26556299 PMID:26642834 PMID:26719882 PMID:26729832 PMID:26749241 PMID:26916530 PMID:26925370 PMID:26960314 PMID:27011036 PMID:27159321 PMID:27171833 PMID:27279923 PMID:27539324 PMID:27542510 PMID:27549546 PMID:27573198 PMID:27604842 PMID:27634942 PMID:27785149 PMID:27819762 PMID:27867439 PMID:27896548 PMID:27974047 PMID:28070496 PMID:28152038 PMID:28179334 PMID:28220018 PMID:28229225 PMID:28255624 PMID:28284009 PMID:28324028 PMID:28349240 PMID:28374168 PMID:28409892 PMID:28490599 PMID:28492532 PMID:28503760 PMID:28646318 PMID:28650885 PMID:28738844 PMID:28784873 PMID:28819017 PMID:28873162 PMID:28891197 PMID:28944243 PMID:28960644 PMID:28973655 PMID:29192238 PMID:29292578 PMID:29386252 PMID:29504908 PMID:29623478 PMID:29684080 PMID:29909963 PMID:29925701 PMID:29951630


    • An association has been curated linking SDHB and gastrointestinal stromal tumor in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SDHB (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 972 RGD objects have been annotated to gastrointestinal stromal tumor  (DOID:9253)
  • 0 papers in RGD have been used to annotate SDHB
  • Curation Notes: ClinVar Annotator: match by term: Gastrointestinal Stromal Sarcoma | ClinVar Annotator: match by term: Gastrointestinal stroma tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor, somatic
  • Original References(s): PMID:30487145 PMID:30549360 PMID:30694796 PMID:30877234 PMID:31046099 PMID:31104306 PMID:31194233 PMID:31216007 PMID:31492822 PMID:31666924 PMID:31780696 PMID:31883676 PMID:32023584 PMID:32035780 PMID:32124427 PMID:32460727 PMID:32659967 PMID:32741965 PMID:32863293 PMID:32963463 PMID:32971818 PMID:33219105 PMID:33300499 PMID:33362715 PMID:33397040 PMID:33558524 PMID:33628464 PMID:34052969 PMID:34072806 PMID:34255389 PMID:34309460 PMID:34377882 PMID:34439168 PMID:34452955 PMID:34906457 PMID:34939938 PMID:35060925 PMID:35171114 PMID:36200007 PMID:490809 PMID:7143317 PMID:9509062 PMID:9536098


    • An association has been curated linking SDHB and gastrointestinal stromal tumor in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SDHB (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 972 RGD objects have been annotated to gastrointestinal stromal tumor  (DOID:9253)
  • 0 papers in RGD have been used to annotate SDHB
  • Curation Notes: ClinVar Annotator: match by term: Gastrointestinal Stromal Sarcoma | ClinVar Annotator: match by term: Gastrointestinal stroma tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor | ClinVar Annotator: match by term: Gastrointestinal stromal tumor of small intestine | ClinVar Annotator: match by term: Gastrointestinal stromal tumor, somatic
  • Original References(s): PMID:30050099 PMID:30087776 PMID:30122763 PMID:30152102 PMID:30155846 PMID:30201732 PMID:30217213 PMID:30352407 PMID:30487145 PMID:30536464 PMID:30549360 PMID:30658386 PMID:30694796 PMID:30877234 PMID:31046099 PMID:31104306 PMID:31194233 PMID:31212687 PMID:31216007 PMID:31308404 PMID:31365623 PMID:31492822 PMID:31666924 PMID:31705439 PMID:31780696 PMID:31883676 PMID:32023584 PMID:32035780 PMID:32124427 PMID:32460727 PMID:32462735 PMID:32659967 PMID:32661476 PMID:32688340 PMID:32741965 PMID:32859697 PMID:32863293 PMID:32963463 PMID:32971818 PMID:33219105 PMID:33300499 PMID:33362715 PMID:33391357 PMID:33397040 PMID:33420946 PMID:33558524 PMID:33564614 PMID:33628464 PMID:33748650 PMID:33777662 PMID:34052969 PMID:34069252 PMID:34072806 PMID:34095481 PMID:34118692 PMID:34255389 PMID:34308366 PMID:34309460 PMID:34377882 PMID:34439168 PMID:34439371 PMID:34452955 PMID:34466344 PMID:34490615 PMID:34654328 PMID:34750850 PMID:34906457 PMID:34939938 PMID:34940133 PMID:35060925 PMID:35127314 PMID:35171114 PMID:35441217 PMID:35460558 PMID:35546442 PMID:35673401 PMID:35739278 PMID:35870552 PMID:35904169 PMID:36200007 PMID:36288950 PMID:36387130 PMID:36597280 PMID:36654613 PMID:36786389 PMID:37529773 PMID:490809 PMID:7143317 PMID:9509062 PMID:9536098


    • Go Back to source page   Continue to Ontology report