Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   


The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at For more information about this ontology, see the Sequence Ontology Home Page at

go back to main search page
Accession:SO:0001536 term browser browse the term
Definition:A variant whereby the effect is evaluated with respect to a reference.
Comment:Updated after request from Lea Starita, from the NCBI.
Synonyms:exact_synonym: functional effect variant;   functional variant

show annotations for term's descendants           Sort by:

Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_variant 0
      functional_effect_variant 0
        altered_gene_product_level + 0
        altered_gene_product_structure 0
        function_uncertain_variant 0
        functionally_abnormal + 0
        functionally_normal 0
paths to the root