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subependymal giant cell astrocytoma - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:subependymal giant cell astrocytoma
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Accession:DOID:5077 term browser browse the term
Synonyms:exact_synonym: SEGA
 xref: GARD:10632;   ICDO:9384/1;   NCI:C3696
For additional species annotation, visit the Alliance of Genome Resources.

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subependymal giant cell astrocytoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A ISO ClinVar Annotator: match by term: Subependymal giant-cell astrocytoma ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004936659:2,201,606...2,269,625
Ensembl chrNW_004936659:2,192,610...2,392,638 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14641
    disease of cellular proliferation 7029
      benign neoplasm 2016
        cell type benign neoplasm 1766
          low grade glioma 589
            benign ependymoma 1
              subependymal glioma 1
                subependymal giant cell astrocytoma 1
Path 2
Term Annotations click to browse term
  disease 14641
    disease of cellular proliferation 7029
      Neoplasms by Site 6511
        organ system cancer 4928
          nervous system cancer 829
            central nervous system cancer 669
              brain cancer 655
                high grade glioma 602
                  Ependymomas 44
                    benign ependymoma 1
                      subependymal glioma 1
                        subependymal giant cell astrocytoma 1
paths to the root