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spermatogenic failure 82 - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:spermatogenic failure 82
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Accession:DOID:0070581 term browser browse the term
Definition:A spermatogenic failure characterized by multiple morphologic abnormalities of the sperm flagella that has_material_basis_in homozygous mutation in the AKAP3 gene on chromosome 12p13.32. (DO)
Synonyms:exact_synonym: SPGF82
 primary_id: MIM:620353
 alt_id: DOID:9008398


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spermatogenic failure 82 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Akap3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chrNW_004624860:1,684,474...1,701,307
Ensembl chrNW_004624860:1,684,433...1,701,736
JBrowse link
G G AKAP3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr11:4,635,962...4,675,993
Ensembl chr11:4,634,442...4,673,571
JBrowse link
G P AKAP3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr 5:65,788,744...65,816,031
Ensembl chr 5:65,797,376...65,819,765
JBrowse link
G S Akap3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chrNW_004936606:4,771,158...4,794,666
Ensembl chrNW_004936606:4,771,180...4,794,902
JBrowse link
G D AKAP3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr27:40,217,313...40,255,934
Ensembl chr27:40,218,035...40,250,954
JBrowse link
G B AKAP3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr12:4,733,095...4,766,596
Ensembl chr12:4,655,004...4,677,651
JBrowse link
G C Akap3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chrNW_004955413:2,411,618...2,432,658
Ensembl chrNW_004955413:2,411,553...2,433,388
JBrowse link
G R Akap3 A-kinase anchoring protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr 4:161,374,198...161,400,062
Ensembl chr 4:159,699,289...159,713,903
JBrowse link
G M Akap3 A kinase anchor protein 3 ISO ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr 6:126,830,061...126,851,271
Ensembl chr 6:126,830,061...126,851,271
JBrowse link
G H AKAP3 A-kinase anchoring protein 3 IAGP ClinVar Annotator: match by term: Spermatogenic failure 82 OMIM
ClinVar
NCBI chr12:4,615,518...4,649,051
Ensembl chr12:4,615,508...4,649,051
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 288179
    disease of anatomical entity 271815
      reproductive system disease 38042
        male reproductive system disease 24371
          male infertility 3377
            spermatogenic failure 1867
              spermatogenic failure 82 10
Path 2
Term Annotations click to browse term
  disease 288179
    disease of anatomical entity 271815
      Urogenital Diseases 59340
        Female Urogenital Diseases and Pregnancy Complications 28938
          Female Urogenital Diseases 23889
            female reproductive system disease 23859
              infertility 4135
                male infertility 3377
                  spermatogenic failure 1867
                    spermatogenic failure 82 10
paths to the root