Variant Visualizer (Variants)

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Analyze GeneStrainQTL List

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Assembly Rnor_5.0


Display an overview plot of the entire region. Useful if the region is too large to view on one screen	Variant Overview Plot
The variant distribution feature will display total counts for all genes and intergenic regions.	Variant Distribution Graph
GA Tool: All genes in the current region will be annotated by the Gene Annotater (GA Tool).	Annotate This Region
Download this graph to Excel or a text file	Download Data
Variant Visualizer Help Documentation	Help Docs

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Region Size:

9,942 (bp)

Positions:

Conservation

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Rnor 5.0

LH/MavRrrc (KNAW)

.693	1.0	.999	.994	.071	.922	1.0	.007	.028	.0	.001	1.0	.001	.449	.065
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
Nr2f1										Nr2f1
A	A	A	C	G	C	G	6	4	C	T	G	2	G	T
5,554,867	5,554,937	5,554,967	5,556,575	5,557,331	5,557,375	5,558,234	5,558,850	5,558,852	5,559,215	5,560,186	5,560,669	5,560,973	5,561,915	5,563,034
G	T	G	T	3/GC	G	A	6/-	4/-	4	-	3	-	T	C

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.