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Gene: RNU7-15P (RNA, U7 small nuclear 15 pseudogene) Homo sapiens

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Symbol:

RNU7-15P

Name:

RNA, U7 small nuclear 15 pseudogene

RGD ID:

2293284

HGNC Page

HGNC:34111

Description:

Type:

pseudo

RefSeq Status:

INFERRED

Previously known as:

U7.15

Related Functional Gene:

RNU7-1

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	132,841,149 - 132,841,407 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	5	132,176,841 - 132,177,099 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Celera	5	128,306,955 - 128,307,013 (-)	NCBI		Celera
Cytogenetic Map	5	q31.1	NCBI
HuRef	5	127,369,369 - 127,369,427 (-)	NCBI		HuRef
CHM1_1	5	131,610,207 - 131,610,265 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	133,360,885 - 133,361,143 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

References

Additional References at PubMed

PMID:18267300

Genomics

Markers in Region

ECD15686

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,176,447 - 132,176,911	UniSTS	GRCh37
Build 36	5	132,204,346 - 132,204,810	RGD	NCBI36
Celera	5	128,306,461 - 128,306,925	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,368,875 - 127,369,339	UniSTS

ECD22219

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,177,271 - 132,177,496	UniSTS	GRCh37
Build 36	5	132,205,170 - 132,205,395	RGD	NCBI36
Celera	5	128,307,285 - 128,307,510	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,699 - 127,369,924	UniSTS

REN71909

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,176,555 - 132,176,818	UniSTS	GRCh37
Build 36	5	132,204,454 - 132,204,717	RGD	NCBI36
Celera	5	128,306,569 - 128,306,832	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,368,983 - 127,369,246	UniSTS

REN71910

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,176,785 - 132,177,012	UniSTS	GRCh37
Build 36	5	132,204,684 - 132,204,911	RGD	NCBI36
Celera	5	128,306,799 - 128,307,026	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,213 - 127,369,440	UniSTS

REN71911

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,176,878 - 132,177,117	UniSTS	GRCh37
Build 36	5	132,204,777 - 132,205,016	RGD	NCBI36
Celera	5	128,306,892 - 128,307,131	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,306 - 127,369,545	UniSTS

REN71912

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,177,086 - 132,177,342	UniSTS	GRCh37
Build 36	5	132,204,985 - 132,205,241	RGD	NCBI36
Celera	5	128,307,100 - 128,307,356	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,514 - 127,369,770	UniSTS

REN71913

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,177,284 - 132,177,508	UniSTS	GRCh37
Build 36	5	132,205,183 - 132,205,407	RGD	NCBI36
Celera	5	128,307,298 - 128,307,522	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,712 - 127,369,936	UniSTS

REN71914

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,177,655 - 132,177,900	UniSTS	GRCh37
Build 36	5	132,205,554 - 132,205,799	RGD	NCBI36
Celera	5	128,307,673 - 128,307,918	RGD
Cytogenetic Map	5	q31.1	UniSTS

REN71915

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,178,264 - 132,178,488	UniSTS	GRCh37
Build 36	5	132,206,163 - 132,206,387	RGD	NCBI36
Celera	5	128,308,288 - 128,308,512	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,370,509 - 127,370,733	UniSTS

REN71916

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,178,464 - 132,178,710	UniSTS	GRCh37
Build 36	5	132,206,363 - 132,206,609	RGD	NCBI36
Celera	5	128,308,488 - 128,308,734	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,370,709 - 127,370,955	UniSTS

REN71917

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,178,685 - 132,178,939	UniSTS	GRCh37
Build 36	5	132,206,584 - 132,206,838	RGD	NCBI36
Celera	5	128,308,709 - 128,308,963	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,370,930 - 127,371,184	UniSTS

stSG601566

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	132,177,283 - 132,178,282	UniSTS	GRCh37
Build 36	5	132,205,182 - 132,206,181	RGD	NCBI36
Celera	5	128,307,297 - 128,308,306	RGD
Cytogenetic Map	5	q31.1	UniSTS
HuRef	5	127,369,711 - 127,370,527	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_007602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC004500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
COSMIC	RNU7-15P	COSMIC
GTEx	RNU7-15P	GTEx
HGNC ID	HGNC:34111	ENTREZGENE
Human Proteome Map	RNU7-15P	Human Proteome Map
NCBI Gene	100147763	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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