CBSLR (CBS mRNA stabilizing lncRNA) - Rat Genome Database

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Gene: CBSLR (CBS mRNA stabilizing lncRNA) Homo sapiens
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Symbol: CBSLR
Name: CBS mRNA stabilizing lncRNA
RGD ID: 151673879
HGNC Page HGNC:55459
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC124904470; uncharacterized LOC124904470
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381185,317,452 - 185,376,300 (+)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map1q25.3NCBI
T2T-CHM13v2.01184,674,976 - 184,734,613 (+)NCBIT2T-CHM13v2.0
JBrowse:




References
Additional References at PubMed
PMID:35499052  


Genomics

Variants

.
Variants in CBSLR
4 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
628523734GWAS2431963_Hhealth trait QTL GWAS2431963 (human)4e-08health trait1185359782185359783Human
628523735GWAS2431964_Hhealth trait QTL GWAS2431964 (human)1e-10health trait1185363840185363841Human
616959268GWAS1976767_Hplatelet crit QTL GWAS1976767 (human)1e-15platelet quantity (VT:0003179)plateletcrit (CMO:0001349)1185375155185375156Human
616509659GWAS1906242_Hreticulocyte amount QTL GWAS1906242 (human)8e-09reticulocyte amount1185342590185342591Human
617029571GWAS2047070_Hreticulocyte count QTL GWAS2047070 (human)1e-09reticulocyte quantity (VT:0003135)total reticulocyte count (CMO:0003020)1185342590185342591Human
616971599GWAS1989098_Hsusceptibility to common cold measurement QTL GWAS1989098 (human)0.000008response to viral infection trait (VT:0010439)1185330214185330215Human
407329198GWAS978174_Hplatelet crit QTL GWAS978174 (human)1e-15platelet crit1185375155185375156Human
597386455GWAS1482529_Hsusceptibility to common cold measurement QTL GWAS1482529 (human)0.000008susceptibility to common cold measurement1185330214185330215Human
597110840GWAS1206914_Hreticulocyte count QTL GWAS1206914 (human)1e-09reticulocyte count1185342590185342591Human
625820287GWAS2241209_Hhealth trait QTL GWAS2241209 (human)1e-10health trait1185363840185363841Human
625820286GWAS2241208_Hhealth trait QTL GWAS2241208 (human)4e-08health trait1185359782185359783Human
597400109GWAS1496183_Hplatelet crit QTL GWAS1496183 (human)1e-15platelet crit1185375155185375156Human
597107136GWAS1203210_Hreticulocyte measurement QTL GWAS1203210 (human)8e-09reticulocyte measurement1185342590185342591Human
617028349GWAS2045848_Hreticulocyte amount QTL GWAS2045848 (human)8e-09reticulocyte amount1185342590185342591Human
407222457GWAS871433_Hsusceptibility to common cold measurement QTL GWAS871433 (human)0.000008susceptibility to common cold measurement1185330214185330215Human
407336379GWAS985355_Hreticulocyte measurement QTL GWAS985355 (human)8e-09reticulocyte measurement1185342590185342591Human
407335096GWAS984072_Hreticulocyte count QTL GWAS984072 (human)1e-09reticulocyte count1185342590185342591Human


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_007066771
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381185,317,452 - 185,376,300 (+)NCBI
RefSeq Acc Id: XR_007070922
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01184,721,814 - 184,734,613 (+)NCBI
RefSeq Acc Id: XR_007070923
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01184,674,976 - 184,734,613 (+)NCBI

Additional Information

Database Acc Id Source(s)
COSMIC CBSLR COSMIC
GTEx CBSLR GTEx
HGNC ID HGNC:55459 ENTREZGENE
Human Proteome Map CBSLR Human Proteome Map
NCBI Gene LOC124904470 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-22 CBSLR  CBS mRNA stabilizing lncRNA  LOC124904470  uncharacterized LOC124904470  Symbol and/or name change 19259463 PROVISIONAL