Akr1c14 (aldo-keto reductase family 1, member C14) - Rat Genome Database

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Pathways
Gene: Akr1c14 (aldo-keto reductase family 1, member C14) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Akr1c14
Name: aldo-keto reductase family 1, member C14
RGD ID: 708361
Description: Enables steroid dehydrogenase activity. Involved in androgen catabolic process; hippocampus development; and response to resveratrol. Located in cytosol. Human ortholog(s) of this gene implicated in 46,XY sex reversal 8; B-lymphoblastic leukemia/lymphoma; T-cell acute lymphoblastic leukemia; alcohol dependence; and leukemia. Orthologous to several human genes including AKR1C1 (aldo-keto reductase family 1 member C1); AKR1C2 (aldo-keto reductase family 1 member C2); and AKR1C3 (aldo-keto reductase family 1 member C3); INTERACTS WITH 1,4-benzoquinone; 17alpha-ethynylestradiol; 17beta-hydroxy-5alpha-androstan-3-one.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 3-alpha-HSD; 3-alpha-hydroxysteroid dehydrogenase; Akr1c9; hydroxyprostaglandin dehydrogenase; LOC191574; steroid 3-alpha-dehydrogenase; steroid3-alpha-dehydrogenase
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81771,066,197 - 71,083,184 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1771,066,200 - 71,083,157 (-)EnsemblGRCr8
mRatBN7.21766,156,286 - 66,173,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1766,156,288 - 66,173,277 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1769,641,423 - 69,658,409 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01773,470,268 - 73,487,254 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01767,513,246 - 67,530,234 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01769,806,095 - 69,827,125 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1769,806,065 - 69,827,112 (-)Ensemblrn6Rnor6.0
Rnor_5.01771,510,873 - 71,530,255 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41777,316,456 - 77,332,903 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1765,671,422 - 65,688,400 (-)NCBICelera
RGSC_v3.11777,327,313 - 77,343,731 (-)NCBI
Cytogenetic Map17q12.2NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,4-benzoquinone  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-methoxyethanol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-chloropropane-1,2-diol  (EXP)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP)
9,10-phenanthroquinone  (EXP)
acetamide  (EXP)
acrylamide  (EXP)
alpha-Zearalanol  (EXP)
ammonium chloride  (EXP)
androstane-3,17-diol  (EXP)
androsterone  (EXP)
benzo[a]pyrene  (EXP)
benzo[a]pyrene-7,8-dione  (EXP)
bisphenol A  (EXP)
Bisphenol B  (EXP)
bromobenzene  (EXP)
buspirone  (EXP)
cholic acid  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
cobalt dichloride  (EXP)
cyclophosphamide  (EXP)
decabromodiphenyl ether  (EXP)
dehydroepiandrosterone  (EXP)
dibutyl phthalate  (EXP)
diethyl maleate  (EXP)
dioxygen  (EXP)
diuron  (EXP)
endosulfan  (EXP)
flurbiprofen  (EXP)
furan  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
indometacin  (EXP)
methamphetamine  (EXP)
methapyrilene  (EXP)
mifepristone  (EXP)
N-nitrosomorpholine  (EXP)
NADP zwitterion  (EXP)
NADP(+)  (EXP)
naphthalenes  (EXP)
nefazodone  (EXP)
nitrofen  (EXP)
Nonylphenol  (EXP)
oxaliplatin  (EXP)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
phenobarbital  (EXP)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (EXP)
Rebamipide  (EXP)
sevoflurane  (EXP)
silicon dioxide  (EXP)
sodium arsenite  (EXP)
tauroursodeoxycholic acid  (EXP)
tetraphene  (EXP)
thioacetamide  (EXP)
topotecan  (EXP)
valdecoxib  (EXP)
valproic acid  (EXP)
vitamin K  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)
ziram  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IDA)

References

References - curated
# Reference Title Reference Citation
1. Molecular cloning and expression of rat liver 3 alpha-hydroxysteroid dehydrogenase. Cheng KC, etal., Mol Endocrinol 1991 Jun;5(6):823-8.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Butylated hydroxyanisole alters rat 5α-reductase and 3α-hydroxysteroid dehydrogenase: Implications for influences of neurosteroidogenesis. Guo J, etal., Neurosci Lett. 2017 Jul 13;653:132-138. doi: 10.1016/j.neulet.2017.05.034. Epub 2017 May 24.
4. Semicomprehensive Analysis of the Postnatal Age-Related Changes in the mRNA Expression of Sex Steroidogenic Enzymes and Sex Steroid Receptors in the Male Rat Hippocampus. Kimoto T, etal., Endocrinology. 2010 Nov 3.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Cloning and sequencing of the cDNA for rat liver 3 alpha-hydroxysteroid/dihydrodiol dehydrogenase. Pawlowski JE, etal., J Biol Chem 1991 May 15;266(14):8820-5.
7. GOA pipeline RGD automated data pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Molecular structure of rat hepatic 3 alpha-hydroxysteroid dehydrogenase. A member of the oxidoreductase gene family. Stolz A, etal., J Biol Chem 1991 Aug 15;266(23):15253-7.
10. Rat hepatic 3 alpha-hydroxysteroid dehydrogenase: expression of cDNA and physiological function in bile acid biosynthetic pathway. Usui E, etal., J Biochem (Tokyo) 1994 Feb;115(2):230-7.
11. Effects of resveratrol on rat neurosteroid synthetic enzymes. Wang Y, etal., Fitoterapia. 2017 Oct;122:61-66. doi: 10.1016/j.fitote.2017.08.005. Epub 2017 Aug 18.
Additional References at PubMed
PMID:1793046   PMID:2026597   PMID:7626489   PMID:7998972   PMID:8146147   PMID:8718859   PMID:10619355   PMID:12477932   PMID:15134457   PMID:15305365   PMID:15379543   PMID:17848571  
PMID:22217852   PMID:28707553  


Genomics

Variants

.
Variants in Akr1c14
126 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:117
Interacting mature miRNAs:128
Transcripts:ENSRNOT00000023835
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70210Cm15Cardiac mass QTL 156.5heart right ventricle mass (VT:0007033)heart right ventricle wet weight (CMO:0000072)173006647275066472Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172413612784432719Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)174238816487388164Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)177061350286062352Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175819406487388164Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)173310464578104645Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)173803135483031354Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)175482950393515804Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174096801789341781Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172723344583975845Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)173803135483031354Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)172652205171522051Rat
1600398Edcs5Endometrial carcinoma susceptibility QTL 52.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)173544694975762341Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172439059584432719Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)173803135483031354Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)176515487293515804Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173803135483031354Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)173310464578104645Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)174238816487388164Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)174605012691050126Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172723344572233445Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175560459793006569Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)174265489587654895Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)173768787782687877Rat
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176855004093515804Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176369714782818564Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)174106235286062352Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172413612784432719Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173219953486201342Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2413612784432719Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172413612784432719Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173604553781045537Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)176456982086954580Rat

Markers in Region
RH143757  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21766,157,024 - 66,157,181 (+)MAPPERmRatBN7.2
Rnor_6.01769,806,834 - 69,806,990NCBIRnor6.0
Rnor_5.01771,511,612 - 71,511,768UniSTSRnor5.0
RGSC_v3.41777,317,195 - 77,317,351UniSTSRGSC3.4
Celera1765,672,161 - 65,672,317UniSTS
RH 3.4 Map17636.0UniSTS
Cytogenetic Map17q12.3UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 65 144 91 90 59 33 59 6 289 131 11 120 75 92 31 4 4

Sequence


Ensembl Acc Id: ENSRNOT00000023835   ⟹   ENSRNOP00000023835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1771,066,200 - 71,083,157 (-)Ensembl
mRatBN7.2 Ensembl1766,156,289 - 66,173,277 (-)Ensembl
Rnor_6.0 Ensembl1769,806,065 - 69,827,112 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102344   ⟹   ENSRNOP00000089621
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1766,156,288 - 66,173,277 (-)Ensembl
RefSeq Acc Id: NM_138547   ⟹   NP_612556
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81771,066,197 - 71,083,184 (-)NCBI
mRatBN7.21766,156,286 - 66,173,277 (-)NCBI
Rnor_6.01769,806,095 - 69,827,125 (-)NCBI
Rnor_5.01771,510,873 - 71,530,255 (-)NCBI
RGSC_v3.41777,316,456 - 77,332,903 (-)RGD
Celera1765,671,422 - 65,688,400 (-)NCBI
Sequence:
RefSeq Acc Id: NP_612556   ⟸   NM_138547
- UniProtKB: Q6LDE6 (UniProtKB/Swiss-Prot),   Q5BKC8 (UniProtKB/Swiss-Prot),   Q6LDE7 (UniProtKB/Swiss-Prot),   P23457 (UniProtKB/Swiss-Prot),   A6JLP8 (UniProtKB/TrEMBL),   A0A8I6AD00 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000023835   ⟸   ENSRNOT00000023835
Ensembl Acc Id: ENSRNOP00000089621   ⟸   ENSRNOT00000102344
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P23457-F1-model_v2 AlphaFold P23457 1-322 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700548
Promoter ID:EPDNEW_R11071
Type:multiple initiation site
Name:Akr1c14_1
Description:aldo-keto reductase family 1, member C14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01769,827,121 - 69,827,181EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708361 AgrOrtholog
BioCyc Gene G2FUF-8831 BioCyc
BioCyc Pathway PWY-6061 [bile acid biosynthesis, neutral pathway] BioCyc
  PWY-7455 [allopregnanolone biosynthesis] BioCyc
  PWY-8200 [backdoor pathway of androgen biosynthesis] BioCyc
BioCyc Pathway Image PWY-6061 BioCyc
  PWY-7455 BioCyc
  PWY-8200 BioCyc
Ensembl Genes ENSRNOG00000017672 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000023835 ENTREZGENE
  ENSRNOT00000023835.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.20.20.100 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7372929 IMAGE-MGC_LOAD
InterPro AKR1C UniProtKB/Swiss-Prot
  Aldo/ket_reductase_CS UniProtKB/Swiss-Prot
  Aldo/keto_reductase UniProtKB/Swiss-Prot
  NADP_OxRdtase_dom UniProtKB/Swiss-Prot
  NADP_OxRdtase_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:191574 UniProtKB/Swiss-Prot
MGC_CLONE MGC:108595 IMAGE-MGC_LOAD
NCBI Gene 191574 ENTREZGENE
PANTHER ALDO/KETO REDUCTASE UniProtKB/Swiss-Prot
Pfam Aldo_ket_red UniProtKB/Swiss-Prot
PhenoGen Akr1c14 PhenoGen
PIRSF AKR UniProtKB/Swiss-Prot
PRINTS ALDKETRDTASE UniProtKB/Swiss-Prot
PROSITE ALDOKETO_REDUCTASE_1 UniProtKB/Swiss-Prot
  ALDOKETO_REDUCTASE_2 UniProtKB/Swiss-Prot
  ALDOKETO_REDUCTASE_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000017672 RatGTEx
Superfamily-SCOP SSF51430 UniProtKB/Swiss-Prot
UniProt A0A8I6AD00 ENTREZGENE
  A6JLP8 ENTREZGENE, UniProtKB/TrEMBL
  DIDH_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q5BKC8 ENTREZGENE
  Q6LDE6 ENTREZGENE
  Q6LDE7 ENTREZGENE
UniProt Secondary Q5BKC8 UniProtKB/Swiss-Prot
  Q6LDE6 UniProtKB/Swiss-Prot
  Q6LDE7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-25 Akr1c14  aldo-keto reductase family 1, member C14  LOC191574  3-alpha-hydroxysteroid dehydrogenase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-09-30 LOC191574        Symbol and Name status set to provisional 70820 PROVISIONAL