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Gene: Celsr2 (cadherin, EGF LAG seven-pass G-type receptor 2) Rattus norvegicus

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Symbol:

Celsr2

Name:

cadherin, EGF LAG seven-pass G-type receptor 2

RGD ID:

69237

Description:

Predicted to enable G protein-coupled receptor activity and calcium ion binding activity. Involved in dendrite morphogenesis; regulation of cell-cell adhesion; and spermatogenesis. Predicted to be located in cytoplasm and plasma membrane. Orthologous to human CELSR2 (cadherin EGF LAG seven-pass G-type receptor 2); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; acetamide; aflatoxin B1.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

cadherin EGF LAG seven-pas G-type receptor 2; cadherin EGF LAG seven-pass G-type receptor 2; cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila); flamingo-like protein celsr2; Flamingo1; Megf3; multiple EGF-like domains protein 3; multiple epidermal growth factor-like domains 3; multiple epidermal growth factor-like domains protein 3; seven-pass transmembrane cadherin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	198,717,333 - 198,741,689 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	198,717,896 - 198,741,581 (-)	Ensembl				GRCr8
mRatBN7.2	2	196,029,206 - 196,053,848 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	196,029,434 - 196,053,845 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	203,673,871 - 203,696,491 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	201,555,989 - 201,578,609 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	196,372,945 - 196,395,565 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	211,183,410 - 211,207,458 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	211,183,311 - 211,207,465 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	230,653,341 - 230,677,459 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	203,960,513 - 203,983,133 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	188,676,929 - 188,699,559 (-)	NCBI		Celera
RGSC_v3.1	2	203,923,277 - 203,943,562 (-)	NCBI
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

coronary artery disease (ISO)

Developmental Disabilities (ISO)

endometrial hyperplasia (ISO)

esophageal atresia/tracheoesophageal fistula (ISO)

hydrocephalus (ISS)

idiopathic scoliosis (ISO)

orofaciodigital syndrome III (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,4'-trichlorobiphenyl (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (EXP)

Aflatoxin B2 alpha (ISO)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

benzene-1,2,4-triol (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

Bisphenol Z (ISO)

butanal (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbamazepine (ISO)

choline (ISO)

chrysene (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

D-glucose (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

Enterolactone (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

genistein (ISO)

gentamycin (EXP)

glucose (ISO)

GSK-J4 (ISO)

Indeno[1,2,3-cd]pyrene (ISO)

isoflavones (EXP)

L-methionine (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-nitrosodiethylamine (ISO)

okadaic acid (ISO)

paraquat (EXP)

PCB138 (ISO)

perfluorooctanoic acid (EXP)

phenylmercury acetate (ISO)

picene (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

cell surface receptor signaling pathway (IEA)

cerebrospinal fluid secretion (ISO)

cilium assembly (ISO)

cilium movement (ISO)

dendrite morphogenesis (IMP)

G protein-coupled receptor signaling pathway (IEA)

generation of neurons (IEA)

homophilic cell-cell adhesion (IEA,ISO)

neural plate anterior/posterior regionalization (IEA,ISO)

neuron migration (ISO)

plasma membrane bounded cell projection organization (IEA)

regulation of cell-cell adhesion (IMP)

regulation of DNA-templated transcription (IEA,ISO)

regulation of protein localization (ISO)

signal transduction (IEA)

spermatogenesis (IEP)

ventricular system development (ISO)

Wnt signaling pathway (IEA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

membrane (IEA)

plasma membrane (IEA,ISO)

Molecular Function

calcium ion binding (IEA)

G protein-coupled receptor activity (IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Hybrid GPCR/cadherin (Celsr) proteins in rat testis are expressed with cell type specificity and exhibit differential Sertoli cell-germ cell adhesion activity.	Beall SA, etal., J Androl. 2005 Jul-Aug;26(4):529-38.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Multiple cadherin superfamily members with unique expression profiles are produced in rat testis.	Johnson KJ, etal., Endocrinology 2000 Feb;141(2):675-83.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Identification of high-molecular-weight proteins with multiple EGF-like motifs by motif-trap screening.	Nakayama M, etal., Genomics 1998 Jul 1;51(1):27-34.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Regulation of dendritic maintenance and growth by a mammalian 7-pass transmembrane cadherin.	Shima Y, etal., Dev Cell. 2004 Aug;7(2):205-16.
12.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data

Additional References at PubMed

PMID:10907856	PMID:12755329	PMID:15744052	PMID:16484285	PMID:17618280	PMID:20473291	PMID:20631168	PMID:21746835	PMID:32988580

Genomics

Comparative Map Data

Celsr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	198,717,333 - 198,741,689 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	198,717,896 - 198,741,581 (-)	Ensembl				GRCr8
mRatBN7.2	2	196,029,206 - 196,053,848 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	196,029,434 - 196,053,845 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	203,673,871 - 203,696,491 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	201,555,989 - 201,578,609 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	196,372,945 - 196,395,565 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	211,183,410 - 211,207,458 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	211,183,311 - 211,207,465 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	230,653,341 - 230,677,459 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	203,960,513 - 203,983,133 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	188,676,929 - 188,699,559 (-)	NCBI		Celera
RGSC_v3.1	2	203,923,277 - 203,943,562 (-)	NCBI
Cytogenetic Map	2	q34	NCBI

CELSR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	109,249,539 - 109,275,751 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	109,249,539 - 109,275,751 (+)	Ensembl			hg38	GRCh38
GRCh37	1	109,792,161 - 109,818,373 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	109,594,164 - 109,619,901 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	109,504,682 - 109,530,414	NCBI
Celera	1	108,062,003 - 108,087,743 (+)	NCBI		Celera
Cytogenetic Map	1	p13.3	NCBI
HuRef	1	107,685,865 - 107,711,622 (+)	NCBI		HuRef
CHM1_1	1	109,907,493 - 109,933,231 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	109,282,346 - 109,308,548 (+)	NCBI		T2T-CHM13v2.0

Celsr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	108,298,164 - 108,323,416 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	108,298,167 - 108,323,383 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	108,390,848 - 108,416,069 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	108,390,851 - 108,415,552 (-)	Ensembl			mm10	GRCm38
MGSCv37	3	108,193,766 - 108,218,412 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	108,520,500 - 108,543,550 (-)	NCBI		MGSCv36	mm8
Celera	3	110,725,058 - 110,749,705 (-)	NCBI		Celera
Cytogenetic Map	3	F3	NCBI
cM Map	3	47.02	NCBI

Celsr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	12,671,759 - 12,695,564 (+)	Ensembl
ChiLan1.0	NW_004955435	12,671,759 - 12,695,070 (+)	NCBI	ChiLan1.0	ChiLan1.0

CELSR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	118,028,278 - 118,054,493 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	117,188,189 - 117,214,398 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	111,627,551 - 111,653,775 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	110,791,720 - 110,817,125 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	110,791,682 - 110,815,421 (+)	Ensembl			panPan2	panpan1.1

CELSR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	42,547,638 - 42,573,407 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	42,548,983 - 42,573,962 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	45,322,198 - 45,348,111 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	42,878,783 - 42,904,743 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	42,879,935 - 42,904,724 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	42,610,137 - 42,636,081 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	42,568,221 - 42,594,142 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	43,003,504 - 43,029,464 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Celsr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	19,310,286 - 19,334,616 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936704	778,480 - 803,886 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936704	779,528 - 803,860 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CELSR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	110,819,428 - 110,845,132 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	110,819,422 - 110,845,354 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	121,290,848 - 121,295,430 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CELSR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	24,270,963 - 24,296,263 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	24,270,952 - 24,296,647 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	34,162,262 - 34,190,697 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Celsr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	4,990,178 - 5,014,119 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624772	4,990,185 - 5,014,008 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Celsr2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	49,842,272 - 49,866,622 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Celsr2
157 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	88
Count of miRNA genes:	67
Interacting mature miRNAs:	77
Transcripts:	ENSRNOT00000027263
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	163997722	225110681	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	169358774	214358774	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170656145	239614549	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149957381	221199885	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	138595962	205135428	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	124537199	209621565	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	145807215	220931416	Rat
61458	Bp10	Blood pressure QTL 10	3.42		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	191709311	217961898	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	122597372	215234002	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	199723085	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	199723085	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	199723085	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	205135267	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	199723085	Rat
2317752	Glom23	Glomerulus QTL 23	3.6		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	2	196140964	251540988	Rat
1549833	Bp257	Blood pressure QTL 257		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170652929	215652929	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	220931218	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	0.014	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	171994826	205135428	Rat
1359031	Bp275	Blood pressure QTL 275			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	188565047	233565047	Rat
1581499	Esta2	Estrogen-induced thymic atrophy QTL 2			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	192287802	229609668	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	199723085	Rat
9589044	Scfw1	Subcutaneous fat weight QTL 1	5.8	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	2	184856304	229856304	Rat
8694435	Bw166	Body weight QTL 166	14.08	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	2	184856304	229856304	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	144882354	205135428	Rat
1298083	Bp158	Blood pressure QTL 158	2.62		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	191709311	217961898	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1357991	Ael2	Aortic elastin QTL 2	4.2	0.000071	aorta elastin amount (VT:0003905)	aortic elastin	2	169227906	214227906	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1331745	Bp203	Blood pressure QTL 203	4.377		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	192287802	221089121	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
8694194	Abfw1	Abdominal fat weight QTL 1	11.7	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	2	184856304	229856304	Rat
61366	Iddm3	Insulin dependent diabetes mellitus QTL 3	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	192287802	237287802	Rat
1578671	Bmd10	Bone mineral density QTL 10	5.4		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	175931416	220931416	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	251712708	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	182024327	227024327	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	159440760	228950743	Rat
2301408	Kidm36	Kidney mass QTL 36		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	184482291	229482291	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	143344967	251712708	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	143746578	205135428	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	143344967	251712708	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	114384617	215381366	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	145306936	212705578	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	113746222	205135428	Rat
738013	Alc15	Alcohol consumption QTL 15	4.1	0.00022	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	2	186850607	231850607	Rat
61398	Bp50	Blood pressure QTL 50	4.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	192287802	237287802	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	114384617	215381366	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	223841096	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	117415288	205135428	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	182635347	227635347	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
631522	Bp74	Blood pressure QTL 74		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	175008837	220008837	Rat
8694383	Bw158	Body weight QTL 158	7.69	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	2	184856304	229856304	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	165453811	210453811	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	163253030	208253030	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166372086	229820014	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat

Markers in Region

RH135417

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	196,031,286 - 196,031,476 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	211,185,491 - 211,185,680	NCBI	Rnor6.0
Rnor_5.0	2	230,655,422 - 230,655,611	UniSTS	Rnor5.0
RGSC_v3.4	2	203,961,164 - 203,961,353	UniSTS	RGSC3.4
Celera	2	188,677,580 - 188,677,769	UniSTS
RH 3.4 Map	2	1397.7	UniSTS
Cytogenetic Map	2	q34	UniSTS

Celsr2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	196,031,934 - 196,032,556 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	211,186,139 - 211,186,760	NCBI	Rnor6.0
Rnor_5.0	2	230,656,070 - 230,656,691	UniSTS	Rnor5.0
RGSC_v3.4	2	203,961,812 - 203,962,433	UniSTS	RGSC3.4
Celera	2	188,678,228 - 188,678,849	UniSTS
Cytogenetic Map	2	q34	UniSTS

G16013

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	196,053,050 - 196,053,269 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	211,207,254 - 211,207,472	NCBI	Rnor6.0
Rnor_5.0	2	230,677,187 - 230,677,405	UniSTS	Rnor5.0
RGSC_v3.4	2	203,982,929 - 203,983,147	UniSTS	RGSC3.4
Celera	2	188,699,355 - 188,699,573	UniSTS
Cytogenetic Map	2	q34	UniSTS

UniSTS:495983

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	196,052,960 - 196,053,041 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	211,207,164 - 211,207,244	NCBI	Rnor6.0
Rnor_5.0	2	230,677,097 - 230,677,177	UniSTS	Rnor5.0
RGSC_v3.4	2	203,982,839 - 203,982,919	UniSTS	RGSC3.4
Celera	2	188,699,265 - 188,699,345	UniSTS
Cytogenetic Map	2	q34	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	87	59	6	351	187	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB011529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC113756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF177695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF177697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY212289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027263 ⟹ ENSRNOP00000027263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	198,717,896 - 198,741,581 (-)	Ensembl
mRatBN7.2 Ensembl	2	196,029,434 - 196,053,845 (-)	Ensembl
Rnor_6.0 Ensembl	2	211,183,311 - 211,207,465 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000132314 ⟹ ENSRNOP00000106325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	198,718,774 - 198,741,581 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000168722 ⟹ ENSRNOP00000101341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	198,718,774 - 198,741,581 (-)	Ensembl

RefSeq Acc Id:

NM_001191110 ⟹ NP_001178039

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	198,718,763 - 198,741,382 (-)	NCBI
mRatBN7.2	2	196,030,636 - 196,053,255 (-)	NCBI
Rnor_6.0	2	211,184,840 - 211,207,458 (-)	NCBI
Rnor_5.0	2	230,653,341 - 230,677,459 (-)	NCBI
Celera	2	188,676,929 - 188,699,559 (-)	NCBI

Sequence:

show sequence

ATGCGGAGCCGGGCTGCCAGCGCCCCCCTCCCAACGCCACTGCTGCCGCTGCTACTGCTGTTGC
TGCTGCTGCCGCCGTCGCCACTACTGGGAGATCAAGTGGGGCCCTGTCGTTCTCTGGGGTCCGG
GGGACGCGGCTCCTCTGGGGCCTGCGCCCCCGTGGGCTGGCTCTGCCCAGCCTCTGCTTCGAAC
CTCTGGCTCTACACCAGCCGCTGCAGAGATTCGGGCATTGAGCTGACCGGCCACCTGGTGCCCC
ATCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGCTCATATCCCTCTTCCGCCATCCTC
TGAAGGCTGCCCCTGGAGCTGTCGACTCCTGGGTATCGGAGGACACCTTTCTCCACAAGGCACG
CTGACCCTGCCTCAAGAACACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGC
TGGCACAGGCCCCAGGGCTCAGGGCTGGGGAAGGATCACGAGAGGAATCTATGGGTGGGCGCAG
GAAAAGGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCCGAG
AACCAGCCTGCTGGTACCTCTGTTGCCTCCTTAAGAGCCATTGATCCCGATGAGGGTGAGGCGG
GTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGA
CCCAATCACTGGTGCTGTCACCACAGCTGAGGAGCTGGATCGGGAGACCAAGAGCACCCATGTC
TTCAGGGTCACCGCACAGGATCATGGTATGCCCCGACGGAGTGCCTTGGCCACACTTACTATCT
TAGTGACTGACACCAATGATCACGACCCTGTTTTTGAGCAGCAAGAATACAAGGAGAGCCTCAG
GGAGAACCTGGAGGTTGGCTATGAGGTGCTTACAGTCAGGGCCACCGATGGCGATGCCCCTCCT
AATGCCAACATTCTGTACCGCCTGCTGGAGGGGCCTGGAGGCAGCCCCTCAGAAGTCTTTGAGA
TCGATCCTCGCTCTGGGGTGATCCGAACCCGCGGCCCCGTAGATCGGGAAGAAGTGGAATCCTA
CAAATTGATAGTGGAGGCGAGTGACCAGGGTCGGGACCCAGGCCCACGGAGCTCCACAGCTGTC
GTCTTCCTGTCTGTGGAAGATGATAATGACAACGCCCCCCAGTTTAGCGAGAAGCGCTACGTGG
TTCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCCGTTCTCCGAGTCACGGCCTCGGACAGAGA
CAAGGGCAGCAACGCCCTGGTGCACTATAGTATCATGAGCGGCAACGCTCGGGGACAGTTCTAT
CTGGATGCTCAGACTGGAGCCCTGGATGTGGTGAGCCCACTCGACTATGAGACAACCAAAGAAT
ATACACTGCGGATCCGGGCCCAGGATGGTGGCCGGCCTCCACTTTCCAACGTCTCCGGTCTAGT
AACCGTGCAGGTCCTAGACATCAATGACAACGCCCCCATCTTTGTCAGCACCCCTTTCCAGGCC
ACGGTCCTAGAGAGTGTACCTTTAGGCTACCTGGTTCTGCATGTCCAAGCGATTGATGCTGATG
CCGGAGAGAACGCCCGCCTCGAATACAGCCTGGCTGGGGTTGGGCACGACTTCCCCTTCACCAT
TAACAACGGCACAGGCTGGATCTCGGTGGCCGCGGAGTTGGACCGGGAAGAGGTTGATTTCTAC
AGCTTCGGAGTAGAAGCCAGGGACCACGGCACCCCAGCACTCACCGCCTCAGCCAGTGTCAGTG
TAACCATCCTGGATGTCAATGACAACAACCCAACCTTTACGCAGCCGGAGTACACGGTGCGGCT
CAACGAGGACGCGGCTGTGGGCACCAGTGTGGTGACGGTGTCAGCCGTGGATCGAGATGCTCAC
AGTGTCATTACCTACCAGATCACCAGCGGCAACACCCGCAACCGCTTCTCTATCACCAGCCAAA
GCGGGGGTGGCCTGGTCTCCCTGGCCTTACCGCTGGACTACAAACTCGAGCGGCAGTATGTGCT
GGCCGTGACTGCCTCGGATGGCACAAGGCAGGACACAGCTCAGATCGTGGTGAATGTCACTGAT
GCCAACACCCATCGTCCCGTCTTCCAGAGCTCCCACTATACGGTGAATGTTAATGAAGACCGGC
CAGCAGGCACCACAGTGGTGCTGATCAGTGCTACAGACGAGGACACAGGGGAGAATGCCCGAAT
CACCTACTTTATGGAGGACAGCATCCCTCAGTTCCGCATCGATGCAGACACTGGGGCCGTCACC
ACCCAGGCTGAGCTGGACTATGAAGATCAGGTGTCTTACACCCTGGCCATCACCGCTCGGGACA
ATGGCATCCCCCAGAAGTCGGACACAACCTACCTGGAGATCCTGGTAAATGACGTGAATGACAA
TGCCCCCCAGTTCCTCAGAGATTCCTACCAGGGGAGTGTCTATGAGGATGTGCCACCCTTCACC
AGCGTCCTGCAGATCTCAGCCACCGATCGCGACTCCGGTCTGAACGGCAGGGTTTTCTACACCT
TCCAAGGAGGGGACGATGGAGATGGTGACTTTATTGTAGAGTCCACATCAGGCATCGTGCGCAC
ACTGCGGAGGCTGGATCGTGAGAATGTGGCCCAGTACATCTTGAGAGCGTACGCGGTGGACAAG
GGGATGCCGCCAGCCCGCACACCCATGGAAGTGACAGTTACTGTACTGGATGTGAATGACAATC
CCCCCGTCTTTGAACAGGATGAGTTTGATGTATTTGTGGAAGAGAACAGCCCCATCGGACTGGC
TGTGGCCCGGGTCACAGCCACCGACCCAGACGAAGGGACCAATGCACAGATCATGTACCAGATA
GTGGAGGGCAATATCCCTGAGGTCTTTCAGCTGGACATCTTCTCGGGCGAGCTAACGGCCCTCG
TAGATTTGGACTACGAGGACCGACCTGAATATATCCTGGTCATCCAGGCTACGTCTGCTCCCTT
GGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTCGACCGCAATGATAACCCGCCAGTGCTGGGC
AACTTTGAGATTCTTTTCAACAACTATGTCACCAACCGCTCGAGCAGCTTCCCTGGGGGTGCTA
TAGGCCGCGTGCCTGCCCATGACCCCGATATCTCAGACAGCCTGACGTACAGCTTTGAGCGAGG
AAATGAACTCAGCCTGGTCCTACTCAATGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACTG
GACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGA
CAGCCCAGTGCTCACTCCGTGTCACCATCATCACAGACGAGATGCTCACACACAGCATCACGCT
GCGCTTGGAAGACATGTCTCCAGAACGCTTTCTGTCCCCACTGCTGGGACTCTTCATTCAGGCT
GTGGCAGCCACATTGGCCACACCCCCAGATCACGTGGTGGTCTTCAATGTGCAGAGGGATACTG
ATGCCCCAGGCGGCCATATCCTCAACGTGAGCCTGTCAGTGGGCCAGCCCCCAGGACCCGGGGG
TGGGCCACCCTTTCTACCTTCAGAGGATCTGCAGGAGCGCCTGTACCTCAACCGCAGCCTGCTC
ACCGCCATCTCAGCTCAGCGCGTGCTCCCCTTCGACGACAACATTTGCCTGCGAGAACCCTGCG
AGAATTACATGCGCTGTGTGTCCGTGCTGCGCTTCGACTCCTCTGCGCCCTTTATCGCTTCCTC
TTCGGTGCTCTTCCGCCCCATCCACCCTGTCGGGGGTCTGCGCTGTCGCTGCCCACCAGGCTTC
ACAGGCGACTACTGCGAGACTGAGGTGGACCTCTGTTACTCAAGACCTTGTGGACCCCATGGGC
ACTGCCGCAGTCGAGAGGGTGGCTATACCTGCCTCTGTCGCGATGGCTACACGGGGGAGCACTG
TGAAGTGAGTGCCCGCTCAGGCCGTTGTACTCCAGGAGTCTGCAAGAATGGGGGTACCTGTGTC
AACCTGTTGGTGGGAGGCTTCAAATGTGACTGCCCATCCGGGGACTTTGAGAAGCCCTTCTGCC
AGGTGACCACACGCAGCTTCCCAGCCCGCTCCTTCATCACCTTCCGGGGCCTTCGCCAGCGCTT
CCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCGTGACGGGCTACTGCTGTACAACGGG
CGCTTCAATGAGAAGCATGACTTCGTAGCTCTCGAGGTGATCCAGGAGCAGGTGCAGCTCACCT
TCTCTGCAGGGGAATCCACCACCACGGTGTCTCCATTCGTGCCTGGAGGGGTCAGTGATGGCCA
GTGGCATACAGTACAGCTGAAGTACTACAATAAGCCGCTGTTGGGTCAGACAGGACTTCCACAA
GGCCCATCTGAGCAGAAGGTGGCTGTGGTGTCCGTGGATGGCTGTGACACAGGGGTGGCTCTGC
GCTTCGGAGCTATGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAA
GTCTCTGGACCTGACAGGGCCCTTGTTGCTGGGTGGGGTGCCAGATCTGCCCGAGAGTTTCCCT
GTCCGAATGCGGCACTTTGTGGGCTGCATGAAGAACCTCCAGGTGGATAGCCGGCACGTCGACA
TGGCCGACTTCATCGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGAACGTGTGTGA
CAGCAACACTTGCCATAATGGTGGCACCTGTGTGAACCAGTGGGACGCATTCAGCTGCGAGTGT
CCCCTAGGCTTCGGGGGCAAGAGCTGTGCCCAGGAAATGGCCAATCCCCAGCGTTTCTTGGGCA
GCAGCCTTGTGGCCTGGCATGGCCTCTCTCTGCCCATCTCTCAGCCCTGGCACCTCAGCCTCAT
GTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGCAGCACCATC
ACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCCTCAT
CCCTGCGTCTGGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCACGCACAGCTGTCACTGGG
AGCTAGCGGGGGCCCTGGCCACGCCATCCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGT
AATCTGGGCCCTCGGCTGCACGGGCTGCACCTGAGCAATATGACAGTCGGGGGAGTTCCCGGGC
CAGCCAGCAGTGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTGAGGGTAAGCGAGACACC
CGAGGGTGTTAGCAGTCTGGATCCCAGCCGTGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGC
TGGCCAGATCCCTGTGACTCGAATCCATGTCCCACCAACAGCTACTGCAGCAACGACTGGGACA
GCTATTCTTGTAGCTGTGATCCAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAA
CCCATGCGAGCACCAGTCTGTGTGTACCCGAAAACCCAGTGCACCCCACGGCTACATCTGCGAG
TGTTTACCAAATTACCTTGGGCCCTATTGTGAGACCAGGATTGACCAACCTTGCCCCCGTGGCT
GGTGGGGACACCCCACATGTGGTCCATGCAACTGCGATGTCAGCAAAGGCTTTGACCCAGACTG
CAACAAGACAAGTGGCGAGTGCCACTGCAAGGAGAATCACTACCGACCCCCCAGCAGCCCCACT
TGCCTCTTGTGTGACTGTTACCCCACTGGCTCTTTGTCCCGAGTCTGTGACCCTGAGGATGGCC
AGTGTCCATGCAAGCCTGGAGTCATTGGGCGTCAGTGTGATCGCTGTGACAACCCTTTTGCTGA
GGTCACCACCAATGGCTGTGAAGTGAATTATGACAGCTGCCCACGGGCCATAGAGGCTGGGATC
TGGTGGCCCCGCACGCGGTTTGGGCTACCTGCTGCTGCCCCCTGCCCCAAGGGCTCCTTTGGGA
CTGCTGTGCGCCACTGTGATGAGCACAGGGGCTGGCTCCCGCCAAACCTCTTCAACTGCACGTC
AGTCACCTTCTCAGAGCTAAAGGGCTTTGCCGAGCGGCTACAGCGAAACGAATCAGGCCTGGAC
TCAGGACGCTCCCAGAGGCTGGCCCTGCTCCTGCGTAATGCCACACAGCACACCTCTGGCTACT
TCGGCAGTGATGTCAAGGTGGCCTACCAGCTGGCCACACGACTGCTGGCTCATGAGAGTGCCCA
GCGGGGCTTTGGGCTGTCCGCCACACAGGATGTGCACTTCACTGAGAATCTGCTGAGGGTGGGC
AGCGCCCTCCTGGATGCGGCCAATAAGAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCA
CTGCCTGGCTGCTCCAGCACTATGAGGCTTATGCCAGTGCCCTGGCCCAGAATATGCGGCATAC
CTACCTGAGCCCCTTCACTATCGTCACACCCAACATTGTCATCTCTGTGGTGCGCCTGGATAAG
GGGAACTTTGCTGGGACCAAGCTGCCCCGTTATGAGGCGTTACGTGGGGAGCGCCCTCCAGATC
TTGAGACCACAGTCATTTTGCCAGAGTCTGTCTTCAGAGAGATGCCTCCCATGGTGAGATCTGC
AGGACCTGGTGAAGCCCAGGAGACTGAGGAGCTGGCCCGGCGGCAGCGGAGGCACCCAGAACTG
AGTCAGGGCGAGGCAGTGGCCAGTGTCATCATTTACCACACGCTGGCTGGACTGCTGCCCCACA
ACTACGACCCAGATAAGCGTAGCCTGAGAGTCCCCAAGCGCCCAGTCATCAACACACCTGTGGT
AAGCATCAGTGTCCACGATGATGAGGAGCTCCTGCCACGGGCACTGGACAAGCCAGTCACAGTG
CAGTTCCGACTGCTGGAGACGGAGGAGCGAACCAAGCCCATCTGTGTCTTCTGGAACCATTCGA
TCCTGGTCAGTGGCACAGGTGGCTGGTCCGCCAGAGGCTGCGAGGTTGTCTTCCGTAACGAGAG
CCATGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTCATGGATGTGTCCCGACGA
GAGAATGGTGAGATTTTGCCACTGAAGACCCTGACGTATGTGGCCCTTGGAGTCACCTTAGCTG
CCCTGATGATCACCTTCCTCTTCCTCACCCTCCTTCGAGCCCTTCGCTCCAACCAGCATGGCAT
CCGACGCAACCTCACAGCTGCCCTGGGCCTGGCCCAGCTGGTCTTTCTCCTGGGGATCAACCAG
GCTGACCTCCCTTTTGCTTGCACAGTCATTGCCATCCTGCTGCACTTCCTGTACCTTTGCACCT
TCTCCTGGGCTCTGCTGGAGGCCTTACACCTGTACCGGGCGCTCACAGAGGTGCGAGACGTCAA
TGCCAGCCCCATGCGTTTCTACTACATGCTGGGCTGGGGCGTTCCTGCTTTCATCACAGGTCTG
GCTGTGGGCTTGGATCCCGAAGGCTATGGAAACCCTGACTTCTGCTGGCTCTCCATCTACGATA
CGCTCATCTGGAGTTTTGCTGGACCAGTGGCCTTTGCTGTTTCGATGAGTGTCTTCCTGTATAT
CCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGTCAGGGCTTCGAGAAGAAAGGCCCTGTCTCA
GGCCTGCGCTCCTCCTTCACTGTCCTCCTGCTGCTGAGTGCCACATGGCTGCTGGCACTGCTGT
CTGTCAACAGCGACACTCTCCTCTTCCACTACCTCTTCGCGGCCTGCAATTGTGTCCAGGGCCC
CTTCATCTTCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGC
AGCCGGAAGCCCAGCCCTGACCCTGCCTTGACCACTAAGTCTACCCTGACCTCGTCCTATAACT
GCCCCAGCCCCTATGCAGATGGGAGGCTGTACCAGCCTTACGGAGATTCGGCCGGCTCCTTGCA
CAGTGCCAGCCGCTCAGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCC
ACGCTGAACCCTGGCCAGGTTCCCCCTGGCCTAGGGGACCCAAGTGGCCTATTCATGGAAGGCC
AAGCCCAGCAACACGATCCCGACACGGACTCTGACAGTGACCTGTCCCTGGAAGATGACCAGAG
TGGTTCCTACGCTTCTACCCACTCATCAGACAGCGAGGAAGAGGAGGAGGAGGCCGCCTTCCCT
GGCGAGCAGGGCTGGGACAGCCTGCTGGGTCCTGGAGCTGAGAGACTGCCCCTTCACAGTACCC
CCAAGGATGGGGGTCCAGGGTCTGGGAAGGTCCCTTGGCCAGGAGACTTTGGGACCACAACAAA
GGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGCCACGGGAGAATGGAGATGCTCTAACTCGG
GAAGGGTCTCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGA
AGTGTCTGCCCACCATCAGCGAAAAGAGTAGCCTCCTAAGGTTGCCCCTGGAGCAGGGCACAGG
GTCTTCCCGGGGCTCCACCGCCAGTGAGGGCAGCAGGAACGGACCTCCTCCACGCCCACCACCG
CGCCAGTCTCTCCAGGAACAGCTGAATGGGGTCATGCCCATCGCCATGAGCATCAAGGCAGGCA
CTGTGGATGAGGACTCTTCTGGCTCCGAATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGC
CGGCGTTCCTTCGTCCCCTCCCCACGCTGCGCTCACGCCCCAATCCTGTCTTCTGCTTTATCCT
GCCCCTGCTCCCTACCTCCTGCCTGCCTGCCTGCCTGCCGGAGCAGCAGCGACGGACCGTCCAT
CTGAGGAGCCTGGGCCTTGCACCTATAAGGCCATCTAGTGCCAAGTCTCCCCCCACCCCTCAAC
CTCCCCTTCACTGCACTTTGGACCCTTGGGGGCCAACATCTCCAAGACAAAGTTTTTCAGAAAA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006233192 ⟹ XP_006233254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	198,717,333 - 198,741,689 (-)	NCBI
mRatBN7.2	2	196,029,206 - 196,053,845 (-)	NCBI
Rnor_6.0	2	211,183,410 - 211,207,458 (-)	NCBI
Rnor_5.0	2	230,653,341 - 230,677,459 (-)	NCBI

Sequence:

show sequence

ATGCGGAGCCGGGCTGCCAGCGCCCCCCTCCCAACGCCACTGCTGCCGCTGCTACTGCTGTTGC
TGCTGCTGCCGCCGTCGCCACTACTGGGAGATCAAGTGGGGCCCTGTCGTTCTCTGGGGTCCGG
GGGACGCGGCTCCTCTGGGGCCTGCGCCCCCGTGGGCTGGCTCTGCCCAGCCTCTGCTTCGAAC
CTCTGGCTCTACACCAGCCGCTGCAGAGATTCGGGCATTGAGCTGACCGGCCACCTGGTGCCCC
ATCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGCTCATATCCCTCTTCCGCCATCCTC
TGAAGGCTGCCCCTGGAGCTGTCGACTCCTGGGTATCGGAGGACACCTTTCTCCACAAGGCACG
CTGACCCTGCCTCAAGAACACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGC
TGGCACAGGCCCCAGGGCTCAGGGCTGGGGAAGGATCACGAGAGGAATCTATGGGTGGGCGCAG
GAAAAGGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCCGAG
AACCAGCCTGCTGGTACCTCTGTTGCCTCCTTAAGAGCCATTGATCCCGATGAGGGTGAGGCGG
GTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGA
CCCAATCACTGGTGCTGTCACCACAGCTGAGGAGCTGGATCGGGAGACCAAGAGCACCCATGTC
TTCAGGGTCACCGCACAGGATCATGGTATGCCCCGACGGAGTGCCTTGGCCACACTTACTATCT
TAGTGACTGACACCAATGATCACGACCCTGTTTTTGAGCAGCAAGAATACAAGGAGAGCCTCAG
GGAGAACCTGGAGGTTGGCTATGAGGTGCTTACAGTCAGGGCCACCGATGGCGATGCCCCTCCT
AATGCCAACATTCTGTACCGCCTGCTGGAGGGGCCTGGAGGCAGCCCCTCAGAAGTCTTTGAGA
TCGATCCTCGCTCTGGGGTGATCCGAACCCGCGGCCCCGTAGATCGGGAAGAAGTGGAATCCTA
CAAATTGATAGTGGAGGCGAGTGACCAGGGTCGGGACCCAGGCCCACGGAGCTCCACAGCTGTC
GTCTTCCTGTCTGTGGAAGATGATAATGACAACGCCCCCCAGTTTAGCGAGAAGCGCTACGTGG
TTCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCCGTTCTCCGAGTCACGGCCTCGGACAGAGA
CAAGGGCAGCAACGCCCTGGTGCACTATAGTATCATGAGCGGCAACGCTCGGGGACAGTTCTAT
CTGGATGCTCAGACTGGAGCCCTGGATGTGGTGAGCCCACTCGACTATGAGACAACCAAAGAAT
ATACACTGCGGATCCGGGCCCAGGATGGTGGCCGGCCTCCACTTTCCAACGTCTCCGGTCTAGT
AACCGTGCAGGTCCTAGACATCAATGACAACGCCCCCATCTTTGTCAGCACCCCTTTCCAGGCC
ACGGTCCTAGAGAGTGTACCTTTAGGCTACCTGGTTCTGCATGTCCAAGCGATTGATGCTGATG
CCGGAGAGAACGCCCGCCTCGAATACAGCCTGGCTGGGGTTGGGCACGACTTCCCCTTCACCAT
TAACAACGGCACAGGCTGGATCTCGGTGGCCGCGGAGTTGGACCGGGAAGAGGTTGATTTCTAC
AGCTTCGGAGTAGAAGCCAGGGACCACGGCACCCCAGCACTCACCGCCTCAGCCAGTGTCAGTG
TAACCATCCTGGATGTCAATGACAACAACCCAACCTTTACGCAGCCGGAGTACACGGTGCGGCT
CAACGAGGACGCGGCTGTGGGCACCAGTGTGGTGACGGTGTCAGCCGTGGATCGAGATGCTCAC
AGTGTCATTACCTACCAGATCACCAGCGGCAACACCCGCAACCGCTTCTCTATCACCAGCCAAA
GCGGGGGTGGCCTGGTCTCCCTGGCCTTACCGCTGGACTACAAACTCGAGCGGCAGTATGTGCT
GGCCGTGACTGCCTCGGATGGCACAAGGCAGGACACAGCTCAGATCGTGGTGAATGTCACTGAT
GCCAACACCCATCGTCCCGTCTTCCAGAGCTCCCACTATACGGTGAATGTTAATGAAGACCGGC
CAGCAGGCACCACAGTGGTGCTGATCAGTGCTACAGACGAGGACACAGGGGAGAATGCCCGAAT
CACCTACTTTATGGAGGACAGCATCCCTCAGTTCCGCATCGATGCAGACACTGGGGCCGTCACC
ACCCAGGCTGAGCTGGACTATGAAGATCAGGTGTCTTACACCCTGGCCATCACCGCTCGGGACA
ATGGCATCCCCCAGAAGTCGGACACAACCTACCTGGAGATCCTGGTAAATGACGTGAATGACAA
TGCCCCCCAGTTCCTCAGAGATTCCTACCAGGGGAGTGTCTATGAGGATGTGCCACCCTTCACC
AGCGTCCTGCAGATCTCAGCCACCGATCGCGACTCCGGTCTGAACGGCAGGGTTTTCTACACCT
TCCAAGGAGGGGACGATGGAGATGGTGACTTTATTGTAGAGTCCACATCAGGCATCGTGCGCAC
ACTGCGGAGGCTGGATCGTGAGAATGTGGCCCAGTACATCTTGAGAGCGTACGCGGTGGACAAG
GGGATGCCGCCAGCCCGCACACCCATGGAAGTGACAGTTACTGTACTGGATGTGAATGACAATC
CCCCCGTCTTTGAACAGGATGAGTTTGATGTATTTGTGGAAGAGAACAGCCCCATCGGACTGGC
TGTGGCCCGGGTCACAGCCACCGACCCAGACGAAGGGACCAATGCACAGATCATGTACCAGATA
GTGGAGGGCAATATCCCTGAGGTCTTTCAGCTGGACATCTTCTCGGGCGAGCTAACGGCCCTCG
TAGATTTGGACTACGAGGACCGACCTGAATATATCCTGGTCATCCAGGCTACGTCTGCTCCCTT
GGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTCGACCGCAATGATAACCCGCCAGTGCTGGGC
AACTTTGAGATTCTTTTCAACAACTATGTCACCAACCGCTCGAGCAGCTTCCCTGGGGGTGCTA
TAGGCCGCGTGCCTGCCCATGACCCCGATATCTCAGACAGCCTGACGTACAGCTTTGAGCGAGG
AAATGAACTCAGCCTGGTCCTACTCAATGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACTG
GACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGA
CAGCCCAGTGCTCACTCCGTGTCACCATCATCACAGACGAGATGCTCACACACAGCATCACGCT
GCGCTTGGAAGACATGTCTCCAGAACGCTTTCTGTCCCCACTGCTGGGACTCTTCATTCAGGCT
GTGGCAGCCACATTGGCCACACCCCCAGATCACGTGGTGGTCTTCAATGTGCAGAGGGATACTG
ATGCCCCAGGCGGCCATATCCTCAACGTGAGCCTGTCAGTGGGCCAGCCCCCAGGACCCGGGGG
TGGGCCACCCTTTCTACCTTCAGAGGATCTGCAGGAGCGCCTGTACCTCAACCGCAGCCTGCTC
ACCGCCATCTCAGCTCAGCGCGTGCTCCCCTTCGACGACAACATTTGCCTGCGAGAACCCTGCG
AGAATTACATGCGCTGTGTGTCCGTGCTGCGCTTCGACTCCTCTGCGCCCTTTATCGCTTCCTC
TTCGGTGCTCTTCCGCCCCATCCACCCTGTCGGGGGTCTGCGCTGTCGCTGCCCACCAGGCTTC
ACAGGCGACTACTGCGAGACTGAGGTGGACCTCTGTTACTCAAGACCTTGTGGACCCCATGGGC
ACTGCCGCAGTCGAGAGGGTGGCTATACCTGCCTCTGTCGCGATGGCTACACGGGGGAGCACTG
TGAAGTGAGTGCCCGCTCAGGCCGTTGTACTCCAGGAGTCTGCAAGAATGGGGGTACCTGTGTC
AACCTGTTGGTGGGAGGCTTCAAATGTGACTGCCCATCCGGGGACTTTGAGAAGCCCTTCTGCC
AGGTGACCACACGCAGCTTCCCAGCCCGCTCCTTCATCACCTTCCGGGGCCTTCGCCAGCGCTT
CCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCGTGACGGGCTACTGCTGTACAACGGG
CGCTTCAATGAGAAGCATGACTTCGTAGCTCTCGAGGTGATCCAGGAGCAGGTGCAGCTCACCT
TCTCTGCAGGGGAATCCACCACCACGGTGTCTCCATTCGTGCCTGGAGGGGTCAGTGATGGCCA
GTGGCATACAGTACAGCTGAAGTACTACAATAAGCCGCTGTTGGGTCAGACAGGACTTCCACAA
GGCCCATCTGAGCAGAAGGTGGCTGTGGTGTCCGTGGATGGCTGTGACACAGGGGTGGCTCTGC
GCTTCGGAGCTATGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAA
GTCTCTGGACCTGACAGGGCCCTTGTTGCTGGGTGGGGTGCCAGATCTGCCCGAGAGTTTCCCT
GTCCGAATGCGGCACTTTGTGGGCTGCATGAAGAACCTCCAGGTGGATAGCCGGCACGTCGACA
TGGCCGACTTCATCGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGAACGTGTGTGA
CAGCAACACTTGCCATAATGGTGGCACCTGTGTGAACCAGTGGGACGCATTCAGCTGCGAGTGT
CCCCTAGGCTTCGGGGGCAAGAGCTGTGCCCAGGAAATGGCCAATCCCCAGCGTTTCTTGGGCA
GCAGCCTTGTGGCCTGGCATGGCCTCTCTCTGCCCATCTCTCAGCCCTGGCACCTCAGCCTCAT
GTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGCAGCACCATC
ACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCCTCAT
CCCTGCGTCTGGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCACGCACAGCTGTCACTGGG
AGCTAGCGGGGGCCCTGGCCACGCCATCCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGT
AATCTGGGCCCTCGGCTGCACGGGCTGCACCTGAGCAATATGACAGTCGGGGGAGTTCCCGGGC
CAGCCAGCAGTGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTGAGGGTAAGCGAGACACC
CGAGGGTGTTAGCAGTCTGGATCCCAGCCGTGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGC
TGGCCAGATCCCTGTGACTCGAATCCATGTCCCACCAACAGCTACTGCAGCAACGACTGGGACA
GCTATTCTTGTAGCTGTGATCCAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAA
CCCATGCGAGCACCAGTCTGTGTGTACCCGAAAACCCAGTGCACCCCACGGCTACATCTGCGAG
TGTTTACCAAATTACCTTGGGCCCTATTGTGAGACCAGGATTGACCAACCTTGCCCCCGTGGCT
GGTGGGGACACCCCACATGTGGTCCATGCAACTGCGATGTCAGCAAAGGCTTTGACCCAGACTG
CAACAAGACAAGTGGCGAGTGCCACTGCAAGGAGAATCACTACCGACCCCCCAGCAGCCCCACT
TGCCTCTTGTGTGACTGTTACCCCACTGGCTCTTTGTCCCGAGTCTGTGACCCTGAGGATGGCC
AGTGTCCATGCAAGCCTGGAGTCATTGGGCGTCAGTGTGATCGCTGTGACAACCCTTTTGCTGA
GGTCACCACCAATGGCTGTGAAGTGAATTATGACAGCTGCCCACGGGCCATAGAGGCTGGGATC
TGGTGGCCCCGCACGCGGTTTGGGCTACCTGCTGCTGCCCCCTGCCCCAAGGGCTCCTTTGGGA
CTGCTGTGCGCCACTGTGATGAGCACAGGGGCTGGCTCCCGCCAAACCTCTTCAACTGCACGTC
AGTCACCTTCTCAGAGCTAAAGGGCTTTGCCGAGCGGCTACAGCGAAACGAATCAGGCCTGGAC
TCAGGACGCTCCCAGAGGCTGGCCCTGCTCCTGCGTAATGCCACACAGCACACCTCTGGCTACT
TCGGCAGTGATGTCAAGGTGGCCTACCAGCTGGCCACACGACTGCTGGCTCATGAGAGTGCCCA
GCGGGGCTTTGGGCTGTCCGCCACACAGGATGTGCACTTCACTGAGAATCTGCTGAGGGTGGGC
AGCGCCCTCCTGGATGCGGCCAATAAGAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCA
CTGCCTGGCTGCTCCAGCACTATGAGGCTTATGCCAGTGCCCTGGCCCAGAATATGCGGCATAC
CTACCTGAGCCCCTTCACTATCGTCACACCCAACATTGTCATCTCTGTGGTGCGCCTGGATAAG
GGGAACTTTGCTGGGACCAAGCTGCCCCGTTATGAGGCGTTACGTGGGGAGCGCCCTCCAGATC
TTGAGACCACAGTCATTTTGCCAGAGTCTGTCTTCAGAGAGATGCCTCCCATGGTGAGATCTGC
AGGACCTGGTGAAGCCCAGGAGACTGAGGAGCTGGCCCGGCGGCAGCGGAGGCACCCAGAACTG
AGTCAGGGCGAGGCAGTGGCCAGTGTCATCATTTACCACACGCTGGCTGGACTGCTGCCCCACA
ACTACGACCCAGATAAGCGTAGCCTGAGAGTCCCCAAGCGCCCAGTCATCAACACACCTGTGGT
AAGCATCAGTGTCCACGATGATGAGGAGCTCCTGCCACGGGCACTGGACAAGCCAGTCACAGTG
CAGTTCCGACTGCTGGAGACGGAGGAGCGAACCAAGCCCATCTGTGTCTTCTGGAACCATTCGA
TCCTGGTCAGTGGCACAGGTGGCTGGTCCGCCAGAGGCTGCGAGGTTGTCTTCCGTAACGAGAG
CCATGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTCATGGATGTGTCCCGACGA
GAGAATGGTGAGATTTTGCCACTGAAGACCCTGACGTATGTGGCCCTTGGAGTCACCTTAGCTG
CCCTGATGATCACCTTCCTCTTCCTCACCCTCCTTCGAGCCCTTCGCTCCAACCAGCATGGCAT
CCGACGCAACCTCACAGCTGCCCTGGGCCTGGCCCAGCTGGTCTTTCTCCTGGGGATCAACCAG
GCTGACCTCCCTTTTGCTTGCACAGTCATTGCCATCCTGCTGCACTTCCTGTACCTTTGCACCT
TCTCCTGGGCTCTGCTGGAGGCCTTACACCTGTACCGGGCGCTCACAGAGGTGCGAGACGTCAA
TGCCAGCCCCATGCGTTTCTACTACATGCTGGGCTGGGGCGTTCCTGCTTTCATCACAGGTCTG
GCTGTGGGCTTGGATCCCGAAGGCTATGGAAACCCTGACTTCTGCTGGCTCTCCATCTACGATA
CGCTCATCTGGAGTTTTGCTGGACCAGTGGCCTTTGCTGTTTCGATGAGTGTCTTCCTGTATAT
CCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGTCAGGGCTTCGAGAAGAAAGGCCCTGTCTCA
GGCCTGCGCTCCTCCTTCACTGTCCTCCTGCTGCTGAGTGCCACATGGCTGCTGGCACTGCTGT
CTGTCAACAGCGACACTCTCCTCTTCCACTACCTCTTCGCGGCCTGCAATTGTGTCCAGGGCCC
CTTCATCTTCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGC
AGCCGGAAGCCCAGCCCTGACCCTGCCTTGACCACTAAGTCTACCCTGACCTCGTCCTATAACT
GCCCCAGCCCCTATGCAGATGGGAGGCTGTACCAGCCTTACGGAGATTCGGCCGGCTCCTTGCA
CAGTGCCAGCCGCTCAGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCC
ACGCTGAACCCTGGCCAGGTTCCCCCTGGCCTAGGGGACCCAAGTGGCCTATTCATGGAAGGCC
AAGCCCAGCAACACGATCCCGACACGGACTCTGACAGTGACCTGTCCCTGGAAGATGACCAGAG
TGGTTCCTACGCTTCTACCCACTCATCAGACAGCGAGGAAGAGGAGGAGGAGGCCGCCTTCCCT
GGCGAGCAGGGCTGGGACAGCCTGCTGGGTCCTGGAGCTGAGAGACTGCCCCTTCACAGTACCC
CCAAGGATGGGGGTCCAGGGTCTGGGAAGGTCCCTTGGCCAGGAGACTTTGGGACCACAACAAA
GGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGCCACGGGAGAATGGAGATGCTCTAACTCGG
GAAGGGTCTCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGA
AGTGTCTGCCCACCATCAGCGAAAAGAGTAGCCTCCTAAGGTTGCCCCTGGAGCAGGGCACAGG
GTCTTCCCGGGGCTCCACCGCCAGTGAGGGCAGCAGGAACGGACCTCCTCCACGCCCACCACCG
CGCCAGTCTCTCCAGGAACAGCTGAATGGGGTCATGCCCATCGCCATGAGCATCAAGGCAGGCA
CTGTGGATGAGGACTCTTCTGGCTCCGACAGCGACGGACCGTCCATCTGAGGAGCCTGGGCCTT
GCACCTATAAGGCCATCTAGTGCCAAGTCTCCCCCCACCCCTCAACCTCCCCTTCACTGCACTT
TGGACCCTTGGGGGCCAACATCTCCAAGACAAAGTTTTTCAGAAAAAAAAAAAAAAGGAAAAAA
GAATTTTAAAAAGGATCTCCACTCTTCATGACTTCAGGGATTAATTTTTTTTTATACGCTGGAA
ATGGATTTCCCTTTCCCTTCCCAAAGAGGATAGGACCTCCCAGGATGTGTCCCAGCCTCTCTTC
AGTTTCATCTGCTGTGCCTCTGGGAGGAGAGGGACTCTTAGGGGTCCTGCCCCTCATTTGCCAT
CACCAAAAGGAAAGGACAAAGCCACACCCACCAGGGGTTGGAGCCCCTGCAAGGCTGCACCAGC
AGGCTGCACCGGAAGGACGGACAGGACAGAAAAAAAGGCACTTCCCACCCGCCAGTTCCACCTC
TCCCAGGAACTGAAAAGCCCTGTCTGGCCAGGGGCAGAAGGACTCATGGCCCCTGGATCCCCCA
AATGCTGCATGAACCGTTTTTTAAGGGGAAACCTGTGCCCCCGTGATGGGGAATGACAACCCCA
GCCCCTCTCCTTTTCCTGGACTCTGGCCGAGTGCTACAGTCCAGGTGTTTGCTCAGTTCGCTGA
CCCCAAAGTGCTTCATTTCTCCTGCCCAACCTTGTAGGGAGGGCCAGTCACTGTTAAGTTGCGC
TTCTTTGCTGTGTGGGCGGGCACCAGGAGGAACGAGGAAGCACAGAGCTGGCTTGGTGGCCCTG
AGGGGCCTCGAGCACAGGTTTCAAGTCTGGGTTCTGGTGTCCACTCACCCCCTCCCCGCCAAAT
CAGACAAATGCCACTTTGTCTGACCTGCTGTGGCCTCTGAGACATGTTCTATTTTTAACCCCTT
CCTGGAATTGGCTCTCTTCTTCAAAGAACCAGGTCCCCCGTTCCTCGTTGTCCCCCTACTTGAC
CCCAGTTCCCTGCGAAGAGAGAGTTAATATATTTTTTATTTATTTGGTTTTCTTTTTGTGTGTG
TTGGGATGGGTTTGTGTCTGGTCCCAAGGGGTCTCATGTGGCCACCCCCAGGCTGGGTGCGTAC
CTGGCAGCCCTGGATTTGGGGCCTACCATCCTTCCTCTTGCTCCACTTACTCCCCTCGGTTCTT
ACCAGCCACCGTTCACTCGAGCCACCCTTCCCTCTGAGCATGTATTCCGGACTTGTCACTGACT
TCCCCTTTAGAGCAGGTGGTAGAGTGAAGGCTCTCAGCAGGAAAGGTGTTCCTGCCCCTCACCT
GGAAGGCTGGCCTCTGGCTTGTCTTCCATGGGTTCTCACCTGCCCTCTGCCCTCTCCCCTCAGC
AATTCCTGTAAAGGGTTAAAAATTTAACTGGATTTTTTTTTTAAACTACTGATGACTTGACTTA
AAAAAATACAAAGATACTGGATGCTAACTTGATACTAACCATCAGATTGTACAGTTTGATTGTT
GCTGTAAATATGGTAGAGTTTTGTTTTTGTTTTGTTTTTCGCCCCCATACTACTGAATAAACTA
GTTCTGTGCAGGAA

hide sequence

RefSeq Acc Id:

XM_017591134 ⟹ XP_017446623

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	198,717,333 - 198,741,689 (-)	NCBI
mRatBN7.2	2	196,029,206 - 196,053,846 (-)	NCBI
Rnor_6.0	2	211,183,410 - 211,207,458 (-)	NCBI

Sequence:

show sequence

ATGCGGAGCCGGGCTGCCAGCGCCCCCCTCCCAACGCCACTGCTGCCGCTGCTACTGCTGTTGC
TGCTGCTGCCGCCGTCGCCACTACTGGGAGATCAAGTGGGGCCCTGTCGTTCTCTGGGGTCCGG
GGGACGCGGCTCCTCTGGGGCCTGCGCCCCCGTGGGCTGGCTCTGCCCAGCCTCTGCTTCGAAC
CTCTGGCTCTACACCAGCCGCTGCAGAGATTCGGGCATTGAGCTGACCGGCCACCTGGTGCCCC
ATCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGCTCATATCCCTCTTCCGCCATCCTC
TGAAGGCTGCCCCTGGAGCTGTCGACTCCTGGGTATCGGAGGACACCTTTCTCCACAAGGCACG
CTGACCCTGCCTCAAGAACACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGC
TGGCACAGGCCCCAGGGCTCAGGGCTGGGGAAGGATCACGAGAGGAATCTATGGGTGGGCGCAG
GAAAAGGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCCGAG
AACCAGCCTGCTGGTACCTCTGTTGCCTCCTTAAGAGCCATTGATCCCGATGAGGGTGAGGCGG
GTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGA
CCCAATCACTGGTGCTGTCACCACAGCTGAGGAGCTGGATCGGGAGACCAAGAGCACCCATGTC
TTCAGGGTCACCGCACAGGATCATGGTATGCCCCGACGGAGTGCCTTGGCCACACTTACTATCT
TAGTGACTGACACCAATGATCACGACCCTGTTTTTGAGCAGCAAGAATACAAGGAGAGCCTCAG
GGAGAACCTGGAGGTTGGCTATGAGGTGCTTACAGTCAGGGCCACCGATGGCGATGCCCCTCCT
AATGCCAACATTCTGTACCGCCTGCTGGAGGGGCCTGGAGGCAGCCCCTCAGAAGTCTTTGAGA
TCGATCCTCGCTCTGGGGTGATCCGAACCCGCGGCCCCGTAGATCGGGAAGAAGTGGAATCCTA
CAAATTGATAGTGGAGGCGAGTGACCAGGGTCGGGACCCAGGCCCACGGAGCTCCACAGCTGTC
GTCTTCCTGTCTGTGGAAGATGATAATGACAACGCCCCCCAGTTTAGCGAGAAGCGCTACGTGG
TTCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCCGTTCTCCGAGTCACGGCCTCGGACAGAGA
CAAGGGCAGCAACGCCCTGGTGCACTATAGTATCATGAGCGGCAACGCTCGGGGACAGTTCTAT
CTGGATGCTCAGACTGGAGCCCTGGATGTGGTGAGCCCACTCGACTATGAGACAACCAAAGAAT
ATACACTGCGGATCCGGGCCCAGGATGGTGGCCGGCCTCCACTTTCCAACGTCTCCGGTCTAGT
AACCGTGCAGGTCCTAGACATCAATGACAACGCCCCCATCTTTGTCAGCACCCCTTTCCAGGCC
ACGGTCCTAGAGAGTGTACCTTTAGGCTACCTGGTTCTGCATGTCCAAGCGATTGATGCTGATG
CCGGAGAGAACGCCCGCCTCGAATACAGCCTGGCTGGGGTTGGGCACGACTTCCCCTTCACCAT
TAACAACGGCACAGGCTGGATCTCGGTGGCCGCGGAGTTGGACCGGGAAGAGGTTGATTTCTAC
AGCTTCGGAGTAGAAGCCAGGGACCACGGCACCCCAGCACTCACCGCCTCAGCCAGTGTCAGTG
TAACCATCCTGGATGTCAATGACAACAACCCAACCTTTACGCAGCCGGAGTACACGGTGCGGCT
CAACGAGGACGCGGCTGTGGGCACCAGTGTGGTGACGGTGTCAGCCGTGGATCGAGATGCTCAC
AGTGTCATTACCTACCAGATCACCAGCGGCAACACCCGCAACCGCTTCTCTATCACCAGCCAAA
GCGGGGGTGGCCTGGTCTCCCTGGCCTTACCGCTGGACTACAAACTCGAGCGGCAGTATGTGCT
GGCCGTGACTGCCTCGGATGGCACAAGGCAGGACACAGCTCAGATCGTGGTGAATGTCACTGAT
GCCAACACCCATCGTCCCGTCTTCCAGAGCTCCCACTATACGGTGAATGTTAATGAAGACCGGC
CAGCAGGCACCACAGTGGTGCTGATCAGTGCTACAGACGAGGACACAGGGGAGAATGCCCGAAT
CACCTACTTTATGGAGGACAGCATCCCTCAGTTCCGCATCGATGCAGACACTGGGGCCGTCACC
ACCCAGGCTGAGCTGGACTATGAAGATCAGGTGTCTTACACCCTGGCCATCACCGCTCGGGACA
ATGGCATCCCCCAGAAGTCGGACACAACCTACCTGGAGATCCTGGTAAATGACGTGAATGACAA
TGCCCCCCAGTTCCTCAGAGATTCCTACCAGGGGAGTGTCTATGAGGATGTGCCACCCTTCACC
AGCGTCCTGCAGATCTCAGCCACCGATCGCGACTCCGGTCTGAACGGCAGGGTTTTCTACACCT
TCCAAGGAGGGGACGATGGAGATGGTGACTTTATTGTAGAGTCCACATCAGGCATCGTGCGCAC
ACTGCGGAGGCTGGATCGTGAGAATGTGGCCCAGTACATCTTGAGAGCGTACGCGGTGGACAAG
GGGATGCCGCCAGCCCGCACACCCATGGAAGTGACAGTTACTGTACTGGATGTGAATGACAATC
CCCCCGTCTTTGAACAGGATGAGTTTGATGTATTTGTGGAAGAGAACAGCCCCATCGGACTGGC
TGTGGCCCGGGTCACAGCCACCGACCCAGACGAAGGGACCAATGCACAGATCATGTACCAGATA
GTGGAGGGCAATATCCCTGAGGTCTTTCAGCTGGACATCTTCTCGGGCGAGCTAACGGCCCTCG
TAGATTTGGACTACGAGGACCGACCTGAATATATCCTGGTCATCCAGGCTACGTCTGCTCCCTT
GGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTCGACCGCAATGATAACCCGCCAGTGCTGGGC
AACTTTGAGATTCTTTTCAACAACTATGTCACCAACCGCTCGAGCAGCTTCCCTGGGGGTGCTA
TAGGCCGCGTGCCTGCCCATGACCCCGATATCTCAGACAGCCTGACGTACAGCTTTGAGCGAGG
AAATGAACTCAGCCTGGTCCTACTCAATGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACTG
GACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGA
CAGCCCAGTGCTCACTCCGTGTCACCATCATCACAGACGAGATGCTCACACACAGCATCACGCT
GCGCTTGGAAGACATGTCTCCAGAACGCTTTCTGTCCCCACTGCTGGGACTCTTCATTCAGGCT
GTGGCAGCCACATTGGCCACACCCCCAGATCACGTGGTGGTCTTCAATGTGCAGAGGGATACTG
ATGCCCCAGGCGGCCATATCCTCAACGTGAGCCTGTCAGTGGGCCAGCCCCCAGGACCCGGGGG
TGGGCCACCCTTTCTACCTTCAGAGGATCTGCAGGAGCGCCTGTACCTCAACCGCAGCCTGCTC
ACCGCCATCTCAGCTCAGCGCGTGCTCCCCTTCGACGACAACATTTGCCTGCGAGAACCCTGCG
AGAATTACATGCGCTGTGTGTCCGTGCTGCGCTTCGACTCCTCTGCGCCCTTTATCGCTTCCTC
TTCGGTGCTCTTCCGCCCCATCCACCCTGTCGGGGGTCTGCGCTGTCGCTGCCCACCAGGCTTC
ACAGGCGACTACTGCGAGACTGAGGTGGACCTCTGTTACTCAAGACCTTGTGGACCCCATGGGC
ACTGCCGCAGTCGAGAGGGTGGCTATACCTGCCTCTGTCGCGATGGCTACACGGGGGAGCACTG
TGAAGTGAGTGCCCGCTCAGGCCGTTGTACTCCAGGAGTCTGCAAGAATGGGGGTACCTGTGTC
AACCTGTTGGTGGGAGGCTTCAAATGTGACTGCCCATCCGGGGACTTTGAGAAGCCCTTCTGCC
AGGTGACCACACGCAGCTTCCCAGCCCGCTCCTTCATCACCTTCCGGGGCCTTCGCCAGCGCTT
CCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCGTGACGGGCTACTGCTGTACAACGGG
CGCTTCAATGAGAAGCATGACTTCGTAGCTCTCGAGGTGATCCAGGAGCAGGTGCAGCTCACCT
TCTCTGCAGGGGAATCCACCACCACGGTGTCTCCATTCGTGCCTGGAGGGGTCAGTGATGGCCA
GTGGCATACAGTACAGCTGAAGTACTACAATAAGCCGCTGTTGGGTCAGACAGGACTTCCACAA
GGCCCATCTGAGCAGAAGGTGGCTGTGGTGTCCGTGGATGGCTGTGACACAGGGGTGGCTCTGC
GCTTCGGAGCTATGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAA
GTCTCTGGACCTGACAGGGCCCTTGTTGCTGGGTGGGGTGCCAGATCTGCCCGAGAGTTTCCCT
GTCCGAATGCGGCACTTTGTGGGCTGCATGAAGAACCTCCAGGTGGATAGCCGGCACGTCGACA
TGGCCGACTTCATCGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGAACGTGTGTGA
CAGCAACACTTGCCATAATGGTGGCACCTGTGTGAACCAGTGGGACGCATTCAGCTGCGAGTGT
CCCCTAGGCTTCGGGGGCAAGAGCTGTGCCCAGGAAATGGCCAATCCCCAGCGTTTCTTGGGCA
GCAGCCTTGTGGCCTGGCATGGCCTCTCTCTGCCCATCTCTCAGCCCTGGCACCTCAGCCTCAT
GTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGCAGCACCATC
ACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCCTCAT
CCCTGCGTCTGGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCACGCACAGCTGTCACTGGG
AGCTAGCGGGGGCCCTGGCCACGCCATCCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGT
AATCTGGGCCCTCGGCTGCACGGGCTGCACCTGAGCAATATGACAGTCGGGGGAGTTCCCGGGC
CAGCCAGCAGTGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTGAGGGTAAGCGAGACACC
CGAGGGTGTTAGCAGTCTGGATCCCAGCCGTGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGC
TGGCCAGATCCCTGTGACTCGAATCCATGTCCCACCAACAGCTACTGCAGCAACGACTGGGACA
GCTATTCTTGTAGCTGTGATCCAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAA
CCCATGCGAGCACCAGTCTGTGTGTACCCGAAAACCCAGTGCACCCCACGGCTACATCTGCGAG
TGTTTACCAAATTACCTTGGGCCCTATTGTGAGACCAGGATTGACCAACCTTGCCCCCGTGGCT
GGTGGGGACACCCCACATGTGGTCCATGCAACTGCGATGTCAGCAAAGGCTTTGACCCAGACTG
CAACAAGACAAGTGGCGAGTGCCACTGCAAGGAGAATCACTACCGACCCCCCAGCAGCCCCACT
TGCCTCTTGTGTGACTGTTACCCCACTGGCTCTTTGTCCCGAGTCTGTGACCCTGAGGATGGCC
AGTGTCCATGCAAGCCTGGAGTCATTGGGCGTCAGTGTGATCGCTGTGACAACCCTTTTGCTGA
GGTCACCACCAATGGCTGTGAAGTGAATTATGACAGCTGCCCACGGGCCATAGAGGCTGGGATC
TGGTGGCCCCGCACGCGGTTTGGGCTACCTGCTGCTGCCCCCTGCCCCAAGGGCTCCTTTGGGA
CTGCTGTGCGCCACTGTGATGAGCACAGGGGCTGGCTCCCGCCAAACCTCTTCAACTGCACGTC
AGTCACCTTCTCAGAGCTAAAGGGCTTTGCCGAGCGGCTACAGCGAAACGAATCAGGCCTGGAC
TCAGGACGCTCCCAGAGGCTGGCCCTGCTCCTGCGTAATGCCACACAGCACACCTCTGGCTACT
TCGGCAGTGATGTCAAGGTGGCCTACCAGCTGGCCACACGACTGCTGGCTCATGAGAGTGCCCA
GCGGGGCTTTGGGCTGTCCGCCACACAGGATGTGCACTTCACTGAGAATCTGCTGAGGGTGGGC
AGCGCCCTCCTGGATGCGGCCAATAAGAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCA
CTGCCTGGCTGCTCCAGCACTATGAGGCTTATGCCAGTGCCCTGGCCCAGAATATGCGGCATAC
CTACCTGAGCCCCTTCACTATCGTCACACCCAACATTGTCATCTCTGTGGTGCGCCTGGATAAG
GGGAACTTTGCTGGGACCAAGCTGCCCCGTTATGAGGCGTTACGTGGGGAGCGCCCTCCAGATC
TTGAGACCACAGTCATTTTGCCAGAGTCTGTCTTCAGAGAGATGCCTCCCATGGTGAGATCTGC
AGGACCTGGTGAAGCCCAGGAGACTGAGGAGCTGGCCCGGCGGCAGCGGAGGCACCCAGAACTG
AGTCAGGGCGAGGCAGTGGCCAGTGTCATCATTTACCACACGCTGGCTGGACTGCTGCCCCACA
ACTACGACCCAGATAAGCGTAGCCTGAGAGTCCCCAAGCGCCCAGTCATCAACACACCTGTGGT
AAGCATCAGTGTCCACGATGATGAGGAGCTCCTGCCACGGGCACTGGACAAGCCAGTCACAGTG
CAGTTCCGACTGCTGGAGACGGAGGAGCGAACCAAGCCCATCTGTGTCTTCTGGAACCATTCGA
TCCTGGTCAGTGGCACAGGTGGCTGGTCCGCCAGAGGCTGCGAGGTTGTCTTCCGTAACGAGAG
CCATGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTCATGGATGTGTCCCGACGA
GAGAATGGTGAGATTTTGCCACTGAAGACCCTGACGTATGTGGCCCTTGGAGTCACCTTAGCTG
CCCTGATGATCACCTTCCTCTTCCTCACCCTCCTTCGAGCCCTTCGCTCCAACCAGCATGGCAT
CCGACGCAACCTCACAGCTGCCCTGGGCCTGGCCCAGCTGGTCTTTCTCCTGGGGATCAACCAG
GCTGACCTCCCTTTTGCTTGCACAGTCATTGCCATCCTGCTGCACTTCCTGTACCTTTGCACCT
TCTCCTGGGCTCTGCTGGAGGCCTTACACCTGTACCGGGCGCTCACAGAGGTGCGAGACGTCAA
TGCCAGCCCCATGCGTTTCTACTACATGCTGGGCTGGGGCGTTCCTGCTTTCATCACAGGTCTG
GCTGTGGGCTTGGATCCCGAAGGCTATGGAAACCCTGACTTCTGCTGGCTCTCCATCTACGATA
CGCTCATCTGGAGTTTTGCTGGACCAGTGGCCTTTGCTGTTTCGATGAGTGTCTTCCTGTATAT
CCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGTCAGGGCTTCGAGAAGAAAGGCCCTGTCTCA
GGCCTGCGCTCCTCCTTCACTGTCCTCCTGCTGCTGAGTGCCACATGGCTGCTGGCACTGCTGT
CTGTCAACAGCGACACTCTCCTCTTCCACTACCTCTTCGCGGCCTGCAATTGTGTCCAGGGCCC
CTTCATCTTCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGC
AGCCGGAAGCCCAGCCCTGACCCTGCCTTGACCACTAAGTCTACCCTGACCTCGTCCTATAACT
GCCCCAGCCCCTATGCAGATGGGAGGCTGTACCAGCCTTACGGAGATTCGGCCGGCTCCTTGCA
CAGTGCCAGCCGCTCAGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCC
ACGCTGAACCCTGGCCAGGTTCCCCCTGGCCTAGGGGACCCAAGTGGCCTATTCATGGAAGGCC
AAGCCCAGCAACACGATCCCGACACGGACTCTGACAGTGACCTGTCCCTGGAAGATGACCAGAG
TGGTTCCTACGCTTCTACCCACTCATCAGACAGCGAGGAAGAGGAGGAGGAGGCCGCCTTCCCT
GGCGAGCAGGGCTGGGACAGCCTGCTGGGTCCTGGAGCTGAGAGACTGCCCCTTCACAGTACCC
CCAAGGATGGGGGTCCAGGGTCTGGGAAGGTCCCTTGGCCAGGAGACTTTGGGACCACAACAAA
GGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGCCACGGGAGAATGGAGATGCTCTAACTCGG
GAAGGGTCTCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGA
AGTGTCTGCCCACCATCAGCGAAAAGAGTAGCCTCCTAAGGTTGCCCCTGGAGCAGGGCACAGG
GTCTTCCCGGGGCTCCACCGCCAGTGAGGGCAGCAGGAACGGACCTCCTCCACGCCCACCACCG
CGCCAGTCTCTCCAGGAACAGCTGAATGGGGTCATGCCCATCGCCATGAGCATCAAGGCAGGCA
CTGTGGATGAGGACTCTTCTGGCTCCGACTAACCCTCTGTCTGCCTTCTCTGCCGCTCTCCTCT
CCTGCCTCTCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGCGTTCCTTCGTC
CCCTCCCCACGCTGCGCTCACGCCCCAATCCTGTCTTCTGCTTTATCCTGCCCCTGCTCCCTAC
CTCCTGCCTGCCTGCCTGCCTGCCGGAGCAGCAGCGACGGACCGTCCATCTGAGGAGCCTGGGC
CTTGCACCTATAAGGCCATCTAGTGCCAAGTCTCCCCCCACCCCTCAACCTCCCCTTCACTGCA
CTTTGGACCCTTGGGGGCCAACATCTCCAAGACAAAGTTTTTCAGAAAAAAAAAAAAAAGGAAA
AAAGAATTTTAAAAAGGATCTCCACTCTTCATGACTTCAGGGATTAATTTTTTTTTATACGCTG
GAAATGGATTTCCCTTTCCCTTCCCAAAGAGGATAGGACCTCCCAGGATGTGTCCCAGCCTCTC
TTCAGTTTCATCTGCTGTGCCTCTGGGAGGAGAGGGACTCTTAGGGGTCCTGCCCCTCATTTGC
CATCACCAAAAGGAAAGGACAAAGCCACACCCACCAGGGGTTGGAGCCCCTGCAAGGCTGCACC
AGCAGGCTGCACCGGAAGGACGGACAGGACAGAAAAAAAGGCACTTCCCACCCGCCAGTTCCAC
CTCTCCCAGGAACTGAAAAGCCCTGTCTGGCCAGGGGCAGAAGGACTCATGGCCCCTGGATCCC
CCAAATGCTGCATGAACCGTTTTTTAAGGGGAAACCTGTGCCCCCGTGATGGGGAATGACAACC
CCAGCCCCTCTCCTTTTCCTGGACTCTGGCCGAGTGCTACAGTCCAGGTGTTTGCTCAGTTCGC
TGACCCCAAAGTGCTTCATTTCTCCTGCCCAACCTTGTAGGGAGGGCCAGTCACTGTTAAGTTG
CGCTTCTTTGCTGTGTGGGCGGGCACCAGGAGGAACGAGGAAGCACAGAGCTGGCTTGGTGGCC
CTGAGGGGCCTCGAGCACAGGTTTCAAGTCTGGGTTCTGGTGTCCACTCACCCCCTCCCCGCCA
AATCAGACAAATGCCACTTTGTCTGACCTGCTGTGGCCTCTGAGACATGTTCTATTTTTAACCC
CTTCCTGGAATTGGCTCTCTTCTTCAAAGAACCAGGTCCCCCGTTCCTCGTTGTCCCCCTACTT
GACCCCAGTTCCCTGCGAAGAGAGAGTTAATATATTTTTTATTTATTTGGTTTTCTTTTTGTGT
GTGTTGGGATGGGTTTGTGTCTGGTCCCAAGGGGTCTCATGTGGCCACCCCCAGGCTGGGTGCG
TACCTGGCAGCCCTGGATTTGGGGCCTACCATCCTTCCTCTTGCTCCACTTACTCCCCTCGGTT
CTTACCAGCCACCGTTCACTCGAGCCACCCTTCCCTCTGAGCATGTATTCCGGACTTGTCACTG
ACTTCCCCTTTAGAGCAGGTGGTAGAGTGAAGGCTCTCAGCAGGAAAGGTGTTCCTGCCCCTCA
CCTGGAAGGCTGGCCTCTGGCTTGTCTTCCATGGGTTCTCACCTGCCCTCTGCCCTCTCCCCTC
AGCAATTCCTGTAAAGGGTTAAAAATTTAACTGGATTTTTTTTTTAAACTACTGATGACTTGAC
TTAAAAAAATACAAAGATACTGGATGCTAACTTGATACTAACCATCAGATTGTACAGTTTGATT
GTTGCTGTAAATATGGTAGAGTTTTGTTTTTGTTTTGTTTTTCGCCCCCATACTACTGAATAAA
CTAGTTCTGTGCAGGAA

hide sequence

RefSeq Acc Id:

XM_039103241 ⟹ XP_038959169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	198,717,333 - 198,741,689 (-)	NCBI
mRatBN7.2	2	196,029,206 - 196,053,848 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178039	(Get FASTA)	NCBI Sequence Viewer
	XP_006233254	(Get FASTA)	NCBI Sequence Viewer
	XP_017446623	(Get FASTA)	NCBI Sequence Viewer
	XP_038959169	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF87070	(Get FASTA)	NCBI Sequence Viewer
	AAF87072	(Get FASTA)	NCBI Sequence Viewer
	AAO72332	(Get FASTA)	NCBI Sequence Viewer
	BAA88687	(Get FASTA)	NCBI Sequence Viewer
	EDL81937	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027263
	ENSRNOP00000101341
	ENSRNOP00000106325
GenBank Protein	Q9QYP2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001178039 ⟸ NM_001191110
- Peptide Label:	precursor
- UniProtKB:	G3V8P3 (UniProtKB/TrEMBL), A6HV01 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSRAASAPLPTPLLPLLLLLLLLPPSPLLGDQVGPCRSLGSGGRGSSGACAPVGWLCPASASN LWLYTSRCRDSGIELTGHLVPHHDGLRVWCPESGAHIPLPPSSEGCPWSCRLLGIGGHLSPQGT LTLPQEHPCLKAPRLRCQSCKLAQAPGLRAGEGSREESMGGRRKRNVNTAPQFQPPSYQATVPE NQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHV FRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP NANILYRLLEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAV VFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFY LDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQA TVLESVPLGYLVLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAH SVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTD ANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVT TQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK GMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQI VEGNIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG NFEILFNNYVTNRSSSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRAL DNNRPLEAIMSVLVSDGVHSVTAQCSLRVTIITDEMLTHSITLRLEDMSPERFLSPLLGLFIQA VAATLATPPDHVVVFNVQRDTDAPGGHILNVSLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLL TAISAQRVLPFDDNICLREPCENYMRCVSVLRFDSSAPFIASSSVLFRPIHPVGGLRCRCPPGF TGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCV NLLVGGFKCDCPSGDFEKPFCQVTTRSFPARSFITFRGLRQRFHFTLALSFATKERDGLLLYNG RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFVPGGVSDGQWHTVQLKYYNKPLLGQTGLPQ GPSEQKVAVVSVDGCDTGVALRFGAMLGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFP VRMRHFVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTCHNGGTCVNQWDAFSCEC PLGFGGKSCAQEMANPQRFLGSSLVAWHGLSLPISQPWHLSLMFRTRQADGVLLQAVTRGRSTI TLQLRAGHVVLSVEGTGLQASSLRLEPGRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEG NLGPRLHGLHLSNMTVGGVPGPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCS WPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSVCTRKPSAPHGYICE CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPT CLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGCEVNYDSCPRAIEAGI WWPRTRFGLPAAAPCPKGSFGTAVRHCDEHRGWLPPNLFNCTSVTFSELKGFAERLQRNESGLD SGRSQRLALLLRNATQHTSGYFGSDVKVAYQLATRLLAHESAQRGFGLSATQDVHFTENLLRVG SALLDAANKRHWELIQQTEGGTAWLLQHYEAYASALAQNMRHTYLSPFTIVTPNIVISVVRLDK GNFAGTKLPRYEALRGERPPDLETTVILPESVFREMPPMVRSAGPGEAQETEELARRQRRHPEL SQGEAVASVIIYHTLAGLLPHNYDPDKRSLRVPKRPVINTPVVSISVHDDEELLPRALDKPVTV QFRLLETEERTKPICVFWNHSILVSGTGGWSARGCEVVFRNESHVSCQCNHMTSFAVLMDVSRR ENGEILPLKTLTYVALGVTLAALMITFLFLTLLRALRSNQHGIRRNLTAALGLAQLVFLLGINQ ADLPFACTVIAILLHFLYLCTFSWALLEALHLYRALTEVRDVNASPMRFYYMLGWGVPAFITGL AVGLDPEGYGNPDFCWLSIYDTLIWSFAGPVAFAVSMSVFLYILSARASCAAQRQGFEKKGPVS GLRSSFTVLLLLSATWLLALLSVNSDTLLFHYLFAACNCVQGPFIFLSYVVLSKEVRKALKFAC SRKPSPDPALTTKSTLTSSYNCPSPYADGRLYQPYGDSAGSLHSASRSGKSQPSYIPFLLREES TLNPGQVPPGLGDPSGLFMEGQAQQHDPDTDSDSDLSLEDDQSGSYASTHSSDSEEEEEEAAFP GEQGWDSLLGPGAERLPLHSTPKDGGPGSGKVPWPGDFGTTTKENSGSGPLEERPRENGDALTR EGSLGPLPGPSTQPHKGILKKKCLPTISEKSSLLRLPLEQGTGSSRGSTASEGSRNGPPPRPPP RQSLQEQLNGVMPIAMSIKAGTVDEDSSGSEFLFFNFLH hide sequence

RefSeq Acc Id:	XP_006233254 ⟸ XM_006233192
- Peptide Label:	isoform X1
- UniProtKB:	G3V8P3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSRAASAPLPTPLLPLLLLLLLLPPSPLLGDQVGPCRSLGSGGRGSSGACAPVGWLCPASASN LWLYTSRCRDSGIELTGHLVPHHDGLRVWCPESGAHIPLPPSSEGCPWSCRLLGIGGHLSPQGT LTLPQEHPCLKAPRLRCQSCKLAQAPGLRAGEGSREESMGGRRKRNVNTAPQFQPPSYQATVPE NQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHV FRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP NANILYRLLEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAV VFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFY LDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQA TVLESVPLGYLVLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAH SVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTD ANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVT TQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK GMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQI VEGNIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG NFEILFNNYVTNRSSSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRAL DNNRPLEAIMSVLVSDGVHSVTAQCSLRVTIITDEMLTHSITLRLEDMSPERFLSPLLGLFIQA VAATLATPPDHVVVFNVQRDTDAPGGHILNVSLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLL TAISAQRVLPFDDNICLREPCENYMRCVSVLRFDSSAPFIASSSVLFRPIHPVGGLRCRCPPGF TGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCV NLLVGGFKCDCPSGDFEKPFCQVTTRSFPARSFITFRGLRQRFHFTLALSFATKERDGLLLYNG RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFVPGGVSDGQWHTVQLKYYNKPLLGQTGLPQ GPSEQKVAVVSVDGCDTGVALRFGAMLGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFP VRMRHFVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTCHNGGTCVNQWDAFSCEC PLGFGGKSCAQEMANPQRFLGSSLVAWHGLSLPISQPWHLSLMFRTRQADGVLLQAVTRGRSTI TLQLRAGHVVLSVEGTGLQASSLRLEPGRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEG NLGPRLHGLHLSNMTVGGVPGPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCS WPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSVCTRKPSAPHGYICE CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPT CLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGCEVNYDSCPRAIEAGI WWPRTRFGLPAAAPCPKGSFGTAVRHCDEHRGWLPPNLFNCTSVTFSELKGFAERLQRNESGLD SGRSQRLALLLRNATQHTSGYFGSDVKVAYQLATRLLAHESAQRGFGLSATQDVHFTENLLRVG SALLDAANKRHWELIQQTEGGTAWLLQHYEAYASALAQNMRHTYLSPFTIVTPNIVISVVRLDK GNFAGTKLPRYEALRGERPPDLETTVILPESVFREMPPMVRSAGPGEAQETEELARRQRRHPEL SQGEAVASVIIYHTLAGLLPHNYDPDKRSLRVPKRPVINTPVVSISVHDDEELLPRALDKPVTV QFRLLETEERTKPICVFWNHSILVSGTGGWSARGCEVVFRNESHVSCQCNHMTSFAVLMDVSRR ENGEILPLKTLTYVALGVTLAALMITFLFLTLLRALRSNQHGIRRNLTAALGLAQLVFLLGINQ ADLPFACTVIAILLHFLYLCTFSWALLEALHLYRALTEVRDVNASPMRFYYMLGWGVPAFITGL AVGLDPEGYGNPDFCWLSIYDTLIWSFAGPVAFAVSMSVFLYILSARASCAAQRQGFEKKGPVS GLRSSFTVLLLLSATWLLALLSVNSDTLLFHYLFAACNCVQGPFIFLSYVVLSKEVRKALKFAC SRKPSPDPALTTKSTLTSSYNCPSPYADGRLYQPYGDSAGSLHSASRSGKSQPSYIPFLLREES TLNPGQVPPGLGDPSGLFMEGQAQQHDPDTDSDSDLSLEDDQSGSYASTHSSDSEEEEEEAAFP GEQGWDSLLGPGAERLPLHSTPKDGGPGSGKVPWPGDFGTTTKENSGSGPLEERPRENGDALTR EGSLGPLPGPSTQPHKGILKKKCLPTISEKSSLLRLPLEQGTGSSRGSTASEGSRNGPPPRPPP RQSLQEQLNGVMPIAMSIKAGTVDEDSSGSDSDGPSI hide sequence

RefSeq Acc Id:	XP_017446623 ⟸ XM_017591134
- Peptide Label:	isoform X2
- UniProtKB:	G3V8P3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSRAASAPLPTPLLPLLLLLLLLPPSPLLGDQVGPCRSLGSGGRGSSGACAPVGWLCPASASN LWLYTSRCRDSGIELTGHLVPHHDGLRVWCPESGAHIPLPPSSEGCPWSCRLLGIGGHLSPQGT LTLPQEHPCLKAPRLRCQSCKLAQAPGLRAGEGSREESMGGRRKRNVNTAPQFQPPSYQATVPE NQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHV FRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP NANILYRLLEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAV VFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFY LDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQA TVLESVPLGYLVLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAH SVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTD ANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVT TQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK GMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQI VEGNIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG NFEILFNNYVTNRSSSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRAL DNNRPLEAIMSVLVSDGVHSVTAQCSLRVTIITDEMLTHSITLRLEDMSPERFLSPLLGLFIQA VAATLATPPDHVVVFNVQRDTDAPGGHILNVSLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLL TAISAQRVLPFDDNICLREPCENYMRCVSVLRFDSSAPFIASSSVLFRPIHPVGGLRCRCPPGF TGDYCETEVDLCYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCV NLLVGGFKCDCPSGDFEKPFCQVTTRSFPARSFITFRGLRQRFHFTLALSFATKERDGLLLYNG RFNEKHDFVALEVIQEQVQLTFSAGESTTTVSPFVPGGVSDGQWHTVQLKYYNKPLLGQTGLPQ GPSEQKVAVVSVDGCDTGVALRFGAMLGNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFP VRMRHFVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTCHNGGTCVNQWDAFSCEC PLGFGGKSCAQEMANPQRFLGSSLVAWHGLSLPISQPWHLSLMFRTRQADGVLLQAVTRGRSTI TLQLRAGHVVLSVEGTGLQASSLRLEPGRANDGDWHHAQLSLGASGGPGHAILSFDYGQQKAEG NLGPRLHGLHLSNMTVGGVPGPASSVARGFRGCLQGVRVSETPEGVSSLDPSRGESINVEPGCS WPDPCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSVCTRKPSAPHGYICE CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKENHYRPPSSPT CLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGCEVNYDSCPRAIEAGI WWPRTRFGLPAAAPCPKGSFGTAVRHCDEHRGWLPPNLFNCTSVTFSELKGFAERLQRNESGLD SGRSQRLALLLRNATQHTSGYFGSDVKVAYQLATRLLAHESAQRGFGLSATQDVHFTENLLRVG SALLDAANKRHWELIQQTEGGTAWLLQHYEAYASALAQNMRHTYLSPFTIVTPNIVISVVRLDK GNFAGTKLPRYEALRGERPPDLETTVILPESVFREMPPMVRSAGPGEAQETEELARRQRRHPEL SQGEAVASVIIYHTLAGLLPHNYDPDKRSLRVPKRPVINTPVVSISVHDDEELLPRALDKPVTV QFRLLETEERTKPICVFWNHSILVSGTGGWSARGCEVVFRNESHVSCQCNHMTSFAVLMDVSRR ENGEILPLKTLTYVALGVTLAALMITFLFLTLLRALRSNQHGIRRNLTAALGLAQLVFLLGINQ ADLPFACTVIAILLHFLYLCTFSWALLEALHLYRALTEVRDVNASPMRFYYMLGWGVPAFITGL AVGLDPEGYGNPDFCWLSIYDTLIWSFAGPVAFAVSMSVFLYILSARASCAAQRQGFEKKGPVS GLRSSFTVLLLLSATWLLALLSVNSDTLLFHYLFAACNCVQGPFIFLSYVVLSKEVRKALKFAC SRKPSPDPALTTKSTLTSSYNCPSPYADGRLYQPYGDSAGSLHSASRSGKSQPSYIPFLLREES TLNPGQVPPGLGDPSGLFMEGQAQQHDPDTDSDSDLSLEDDQSGSYASTHSSDSEEEEEEAAFP GEQGWDSLLGPGAERLPLHSTPKDGGPGSGKVPWPGDFGTTTKENSGSGPLEERPRENGDALTR EGSLGPLPGPSTQPHKGILKKKCLPTISEKSSLLRLPLEQGTGSSRGSTASEGSRNGPPPRPPP RQSLQEQLNGVMPIAMSIKAGTVDEDSSGSD hide sequence

Ensembl Acc Id:

ENSRNOP00000027263 ⟸ ENSRNOT00000027263

RefSeq Acc Id:	XP_038959169 ⟸ XM_039103241
- Peptide Label:	isoform X3
- UniProtKB:	G3V8P3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000101341 ⟸ ENSRNOT00000168722

Ensembl Acc Id:

ENSRNOP00000106325 ⟸ ENSRNOT00000132314

Protein Domains

Cadherin EGF-like G-protein coupled receptors family 2 profile GAIN-B Laminin EGF-like Laminin G Laminin G-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9QYP2-F1-model_v2	AlphaFold	Q9QYP2	1-2144	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:69237	AgrOrtholog
BioCyc Gene	G2FUF-51619	BioCyc
Ensembl Genes	ENSRNOG00000020058	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000027263	ENTREZGENE
	ENSRNOT00000132314	ENTREZGENE
	ENSRNOT00000168722	ENTREZGENE
Gene3D-CATH	1.25.40.610	UniProtKB/Swiss-Prot
	2.60.120.200	UniProtKB/Swiss-Prot
	2.60.220.50	UniProtKB/Swiss-Prot
	4.10.1240.10	UniProtKB/Swiss-Prot
	Cadherins	UniProtKB/Swiss-Prot
	Laminin	UniProtKB/Swiss-Prot
	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot
InterPro	Cadherin-like_dom	UniProtKB/Swiss-Prot
	Cadherin-like_sf	UniProtKB/Swiss-Prot
	Cadherin_CELSR1-3_9th	UniProtKB/Swiss-Prot
	Cadherin_CS	UniProtKB/Swiss-Prot
	ConA-like_dom_sf	UniProtKB/Swiss-Prot
	EGF-like_Ca-bd_dom	UniProtKB/Swiss-Prot
	EGF-like_dom	UniProtKB/Swiss-Prot
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/Swiss-Prot
	GAIN_B	UniProtKB/Swiss-Prot
	GAIN_dom_N	UniProtKB/Swiss-Prot
	GAIN_dom_sf	UniProtKB/Swiss-Prot
	GPCR_2-like	UniProtKB/Swiss-Prot
	GPCR_2_extracell_dom_sf	UniProtKB/Swiss-Prot
	GPCR_2_extracellular_dom	UniProtKB/Swiss-Prot
	GPCR_2_secretin-like	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	Laminin_EGF	UniProtKB/Swiss-Prot
	Laminin_G	UniProtKB/Swiss-Prot
NCBI Gene	83465	ENTREZGENE
PANTHER	CADHERIN EGF LAG SEVEN-PASS G-TYPE RECEPTOR 2	UniProtKB/Swiss-Prot
	FAT ATYPICAL CADHERIN-RELATED	UniProtKB/Swiss-Prot
Pfam	7tm_2	UniProtKB/Swiss-Prot
	Cadherin	UniProtKB/Swiss-Prot
	Cadherin_CELSR2_9th	UniProtKB/Swiss-Prot
	EGF	UniProtKB/Swiss-Prot
	GAIN	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	Laminin_EGF	UniProtKB/Swiss-Prot
	Laminin_G_2	UniProtKB/Swiss-Prot
PhenoGen	Celsr2	PhenoGen
PRINTS	CADHERIN	UniProtKB/Swiss-Prot
	GPCRSECRETIN	UniProtKB/Swiss-Prot
PROSITE	ASX_HYDROXYL	UniProtKB/Swiss-Prot
	CADHERIN_1	UniProtKB/Swiss-Prot
	CADHERIN_2	UniProtKB/Swiss-Prot
	EGF_1	UniProtKB/Swiss-Prot
	EGF_2	UniProtKB/Swiss-Prot
	EGF_3	UniProtKB/Swiss-Prot
	EGF_LAM_1	UniProtKB/Swiss-Prot
	EGF_LAM_2	UniProtKB/Swiss-Prot
	G_PROTEIN_RECEP_F2_3	UniProtKB/Swiss-Prot
	G_PROTEIN_RECEP_F2_4	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	LAM_G_DOMAIN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000020058	RatGTEx
SMART	EGF	UniProtKB/Swiss-Prot
	EGF_CA	UniProtKB/Swiss-Prot
	EGF_Lam	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	HormR	UniProtKB/Swiss-Prot
	LamG	UniProtKB/Swiss-Prot
	SM00112	UniProtKB/Swiss-Prot
Superfamily-SCOP	EGF/Laminin	UniProtKB/Swiss-Prot
	SSF49313	UniProtKB/Swiss-Prot
	SSF49899	UniProtKB/Swiss-Prot
TIGR	TC232810
UniProt	A0ABK0L7Y5_RAT	UniProtKB/TrEMBL
	A0ABK0LIM0_RAT	UniProtKB/TrEMBL
	A6HV01	ENTREZGENE, UniProtKB/TrEMBL
	CELR2_RAT	UniProtKB/Swiss-Prot
	G3V8P3	ENTREZGENE, UniProtKB/TrEMBL
	Q9QYP2	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-02-27	Celsr2	cadherin, EGF LAG seven-pass G-type receptor 2	Celsr2	cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-25	Celsr2	cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	Celsr2	cadherin EGF LAG seven-pass G-type receptor 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Celsr2	cadherin EGF LAG seven-pass G-type receptor 2			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains seven transmembrane-spanning segments	68759
gene_process	promotes homophilic cell aggregation	68759

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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