Advanced Search (OLGA)

Gene: Gpld1 (glycosylphosphatidylinositol specific phospholipase D1) Rattus norvegicus

Analyze

Symbol:

Gpld1

Name:

glycosylphosphatidylinositol specific phospholipase D1

RGD ID:

631371

Description:

Enables glycosylphosphatidylinositol phospholipase D activity. Predicted to be involved in several processes, including cell migration involved in sprouting angiogenesis; cell surface receptor signaling pathway; and positive regulation of metabolic process. Located in extracellular space. Orthologous to human GPLD1 (glycosylphosphatidylinositol specific phospholipase D1); PARTICIPATES IN glycosylphosphatidylinositol anchor biosynthetic pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

glycoprotein phospholipase D; glycosyl-phosphatidylinositol-specific phospholipase D; glycosylphosphatidylinositol phospholipase D; GPI-PLD; GPI-specific phospholipase D; phosphatidylinositol-glycan-specific phospholipase D; PI-G PLD

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	40,512,659 - 40,560,483 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	40,512,660 - 40,554,975 (-)	Ensembl				GRCr8
mRatBN7.2	17	40,084,427 - 40,132,035 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	40,084,617 - 40,126,939 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	40,152,671 - 40,195,030 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	41,756,723 - 41,799,087 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	40,038,148 - 40,082,405 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	42,085,027 - 42,131,344 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	42,085,028 - 42,127,678 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	43,952,824 - 44,000,859 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	47,145,567 - 47,188,345 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	39,722,211 - 39,764,466 (-)	NCBI		Celera
RGSC_v3.1	17	47,148,408 - 47,191,186 (-)	NCBI
Cytogenetic Map	17	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2,4-dinitrotoluene (EXP)

2,6-di-tert-butyl-4-methylphenol (EXP)

2,6-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (EXP,ISO)

amiodarone (EXP)

ammonium chloride (EXP)

benzbromarone (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

calcitriol (ISO)

carbamazepine (ISO)

CGP 52608 (ISO)

chenodeoxycholic acid (ISO)

ciguatoxin CTX1B (ISO)

cisplatin (ISO)

clofibrate (EXP,ISO)

Cuprizon (EXP)

decabromodiphenyl ether (ISO)

deoxycholic acid (ISO)

diclofenac (ISO)

dorsomorphin (ISO)

ellagic acid (ISO)

endosulfan (EXP)

ethanol (ISO)

fipronil (EXP)

flutamide (EXP)

folic acid (ISO)

fructose (ISO)

furan (EXP)

glafenine (EXP)

glycochenodeoxycholic acid (ISO)

glycocholic acid (ISO)

glycodeoxycholic acid (ISO)

L-ethionine (EXP)

leflunomide (ISO)

methapyrilene (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-4-phenylpyridinium (EXP)

N-nitrosodiethylamine (EXP)

nefazodone (EXP)

nickel atom (ISO)

nimesulide (EXP)

omeprazole (EXP)

paracetamol (EXP,ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (EXP)

pirinixic acid (EXP,ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rimonabant (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

Soman (EXP)

sulforaphane (ISO)

tamoxifen (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

triphenyl phosphate (ISO)

tris(2-butoxyethyl) phosphate (ISO)

trovafloxacin (EXP)

valdecoxib (EXP)

valproic acid (ISO)

zinc atom (EXP)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration involved in sprouting angiogenesis (IEA,ISO,ISS)

cellular response to cholesterol (IEA,ISO,ISS)

cellular response to insulin stimulus (IEA,ISO,ISS)

cellular response to pH (IEA,ISO,ISS)

cellular response to triglyceride (IEA,ISO,ISS)

cellular response to xenobiotic stimulus (IEA,ISO,ISS)

chondrocyte differentiation (ISO,ISS)

complement receptor mediated signaling pathway (IEA,ISO,ISS)

insulin receptor signaling pathway (IEA,ISO,ISS)

lipid metabolic process (IEA)

negative regulation of cell population proliferation (IEA,ISO,ISS)

negative regulation of triglyceride catabolic process (ISO,ISS)

ossification (ISO,ISS)

positive regulation of apoptotic process (IEA,ISO,ISS)

positive regulation of endothelial cell migration (IEA,ISO,ISS)

positive regulation of glucose metabolic process (ISO,ISS)

positive regulation of high-density lipoprotein particle clearance (ISO,ISS)

positive regulation of insulin secretion involved in cellular response to glucose stimulus (ISO,ISS)

positive regulation of triglyceride biosynthetic process (ISO,ISS)

protein secretion (IEA,ISO,ISS)

regulation of cellular response to insulin stimulus (IEA,ISO,ISS)

response to glucose (IEA,ISO,ISS)

transepithelial transport (ISO,ISS)

Cellular Component

cytoplasm (IEA,ISO,ISS)

extracellular matrix (IBA,ISO,ISS)

extracellular region (IEA)

extracellular space (IBA,IDA,IEA,ISO)

high-density lipoprotein particle (IEA)

Molecular Function

D-type glycerophospholipase activity (IEA,ISO)

GPI anchor phospholipase D activity (IBA,IDA,IEA,ISO,TAS)

hydrolase activity (IEA)

protein binding (ISO)

sodium channel regulator activity (ISO,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

glycosylphosphatidylinositol anchor biosynthetic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Insulin reduces serum glycosylphosphatidylinositol phospholipase D levels in human type I diabetic patients and streptozotocin diabetic rats.	Schofield JN, etal., Mol Genet Metab 2002 Feb;75(2):154-61.
7.	Enzymatic properties of phosphatidylinositol-glycan-specific phospholipase C from rat liver and phosphatidylinositol-glycan-specific phospholipase D from rat serum.	Stieger S, etal., Eur J Biochem. 1991 Apr 10;197(1):67-73.

Additional References at PubMed

PMID:1833386	PMID:2760042	PMID:9716655	PMID:15907827	PMID:15946906	PMID:16219662	PMID:16822939	PMID:17720976	PMID:17761367	PMID:17897319	PMID:18328347	PMID:19135435
PMID:20153004	PMID:23533145	PMID:30457913

Genomics

Comparative Map Data

Gpld1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	40,512,659 - 40,560,483 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	40,512,660 - 40,554,975 (-)	Ensembl				GRCr8
mRatBN7.2	17	40,084,427 - 40,132,035 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	40,084,617 - 40,126,939 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	40,152,671 - 40,195,030 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	41,756,723 - 41,799,087 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	40,038,148 - 40,082,405 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	42,085,027 - 42,131,344 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	42,085,028 - 42,127,678 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	43,952,824 - 44,000,859 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	47,145,567 - 47,188,345 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	39,722,211 - 39,764,466 (-)	NCBI		Celera
RGSC_v3.1	17	47,148,408 - 47,191,186 (-)	NCBI
Cytogenetic Map	17	p11	NCBI

GPLD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	24,423,969 - 24,495,287 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	24,424,565 - 24,495,205 (-)	Ensembl			hg38	GRCh38
GRCh37	6	24,426,060 - 24,489,806 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	24,536,384 - 24,597,829 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	25,661,841 - 25,723,263 (-)	NCBI		Celera
Cytogenetic Map	6	p22.3	NCBI
HuRef	6	24,375,283 - 24,439,304 (-)	NCBI		HuRef
CHM1_1	6	24,430,295 - 24,494,056 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	24,295,865 - 24,365,025 (-)	NCBI		T2T-CHM13v2.0

Gpld1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	25,127,135 - 25,175,919 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	25,127,135 - 25,176,484 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	24,937,785 - 24,991,936 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	24,943,152 - 24,992,501 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	25,035,021 - 25,083,805 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	24,950,680 - 24,998,220 (+)	NCBI		MGSCv36	mm8
Celera	13	25,173,821 - 25,222,605 (+)	NCBI		Celera
Cytogenetic Map	13	A3.1	NCBI
cM Map	13	10.79	NCBI

Gpld1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955483	2,502,345 - 2,552,689 (+)	Ensembl
ChiLan1.0	NW_004955483	2,501,751 - 2,552,855 (+)	NCBI	ChiLan1.0	ChiLan1.0

GPLD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	39,067,118 - 39,140,001 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	35,068,472 - 35,139,477 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	24,257,923 - 24,332,171 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	24,588,663 - 24,665,229 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	24,588,672 - 24,665,229 (-)	Ensembl			panPan2	panpan1.1

GPLD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	22,495,001 - 22,556,264 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	22,495,073 - 22,554,105 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	22,463,025 - 22,523,987 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	22,617,050 - 22,678,177 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	22,615,700 - 22,678,274 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	22,422,523 - 22,483,672 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	22,470,837 - 22,531,848 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	23,906,713 - 23,968,034 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gpld1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	2,793,902 - 2,841,294 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936671	782,135 - 827,771 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936671	780,173 - 827,628 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPLD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	19,291,174 - 19,346,619 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	19,289,385 - 19,355,606 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	20,441,759 - 20,496,224 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPLD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	47,748,183 - 47,809,459 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	47,765,699 - 47,804,378 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	24,360,187 - 24,428,174 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gpld1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	2,505,945 - 2,569,464 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624756	2,505,937 - 2,569,618 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gpld1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	43,986,187 - 44,037,832 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gpld1
167 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	216
Count of miRNA genes:	151
Interacting mature miRNAs:	168
Transcripts:	ENSRNOT00000024196
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
1354654	Spl7	Serum phospholipid level QTL 7	5.5		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	17	38031354	83031354	Rat
70157	Niddm32	Non-insulin dependent diabetes mellitus QTL 32	4.34		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	22660799	55604694	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
1354628	Stl13	Serum triglyceride level QTL 13	3.8		blood triglyceride amount (VT:0002644)	blood triglyceride level (CMO:0000118)	17	21498994	50592236	Rat
1354629	Scl31	Serum cholesterol level QTL 31	4.1		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	17	38031354	83031354	Rat
1600398	Edcs5	Endometrial carcinoma susceptibility QTL 5	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	17	35446949	75762341	Rat
1559055	Bp278	Blood pressure QTL 278		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
152025238	Slep14	Serum leptin concentration QTL 14	4.62		blood leptin amount (VT:0005667)		17	24390595	84432719	Rat
1354638	Insul1	Insulin level QTL 1	4.8		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	38031354	83031354	Rat
1354635	Bp245	Blood pressure QTL 245	6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	38031354	83031354	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
4889955	Bss93	Bone structure and strength QTL 93	4.4		tibia size trait (VT:0100001)	tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)	17	27233445	65155015	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
1354663	Bvd5	Brain ventricular dilatation QTL 5	3.51	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	17	32199534	86201342	Rat
152023740	Bp406	Blood pressure QTL 406	6.06		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
7488966	Bp370	Blood pressure QTL 370		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	23858926	68858926	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
152023737	Bp405	Blood pressure QTL 405	5.06		arterial blood pressure trait (VT:2000000)			24136127	84432719	Rat
152023736	Bp404	Blood pressure QTL 404	3.78		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
724528	Uae4	Urinary albumin excretion QTL 4	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	17	36045537	81045537	Rat
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
70210	Cm15	Cardiac mass QTL 15	6.5		heart right ventricle mass (VT:0007033)	heart right ventricle wet weight (CMO:0000072)	17	30066472	75066472	Rat
152023626	Bp403	Blood pressure QTL 403	3.86		arterial blood pressure trait (VT:2000000)		17	24136127	84432719	Rat
9590107	Sffal7	Serum free fatty acids level QTL 7	4.81	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	17	33104645	78104645	Rat
724549	Niddm56	Non-insulin dependent diabetes mellitus QTL 56		0.03	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	17	32199534	49497050	Rat
1581512	Cm55	Cardiac mass QTL 55	2.8	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	27233445	83975845	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
61394	Bp8	Blood pressure QTL 8	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	23286322	64246472	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	26522051	71522051	Rat
10450503	Bp386	Blood pressure QTL 386		0.28	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	22019705	67019705	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
2313854	Bp343	Blood pressure QTL 343	3.9		life span trait (VT:0005372)	age at time of death (CMO:0001193)	17	32199534	55604694	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
8552928	Pigfal9	Plasma insulin-like growth factor 1 level QTL 9	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	33104645	78104645	Rat
12903980	Cm120	Cardiac mass QTL 120		0.002	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	17	23858926	68858926	Rat
4889891	Eae32	Experimental allergic encephalomyelitis QTL 32	4.8	0.0002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	27233445	72233445	Rat
12903981	Am17	Aortic mass QTL 17		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	17	23858926	68858926	Rat
12903982	Kidm70	Kidney mass QTL 70		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	17	23858926	68858926	Rat
12903978	Cm118	Cardiac mass QTL 118		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	17	23858926	68858926	Rat
1354619	Bp242	Blood pressure QTL 242	6.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	37687877	82687877	Rat
12903979	Cm119	Cardiac mass QTL 119		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	17	23858926	68858926	Rat

Markers in Region

RH131036

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	40,084,725 - 40,084,911 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	42,085,137 - 42,085,322	NCBI	Rnor6.0
Rnor_5.0	17	43,952,934 - 43,953,119	UniSTS	Rnor5.0
RGSC_v3.4	17	47,145,677 - 47,145,862	UniSTS	RGSC3.4
Celera	17	39,722,321 - 39,722,506	UniSTS
Cytogenetic Map	17	p11	UniSTS

BI275110

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	40,086,726 - 40,086,918 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	42,087,138 - 42,087,329	NCBI	Rnor6.0
Rnor_5.0	17	43,954,935 - 43,955,126	UniSTS	Rnor5.0
RGSC_v3.4	17	47,147,678 - 47,147,869	UniSTS	RGSC3.4
Celera	17	39,724,322 - 39,724,513	UniSTS
Cytogenetic Map	17	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	67	159	91	90	59	83	59	6	345	182	9	138	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005495254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ308109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO393645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO571457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO571976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024196 ⟹ ENSRNOP00000024196

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	40,512,660 - 40,554,975 (-)	Ensembl
mRatBN7.2 Ensembl	17	40,084,617 - 40,126,939 (-)	Ensembl
Rnor_6.0 Ensembl	17	42,085,028 - 42,127,678 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112554 ⟹ ENSRNOP00000079067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	40,513,304 - 40,554,975 (-)	Ensembl
mRatBN7.2 Ensembl	17	40,085,261 - 40,126,939 (-)	Ensembl

RefSeq Acc Id:

NM_001100512 ⟹ NP_001093982

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,554,975 (-)	NCBI
mRatBN7.2	17	40,084,616 - 40,126,939 (-)	NCBI
Rnor_6.0	17	42,085,027 - 42,127,678 (-)	NCBI
Rnor_5.0	17	43,952,824 - 44,000,859 (-)	NCBI
RGSC_v3.4	17	47,145,567 - 47,188,345 (-)	RGD
Celera	17	39,722,211 - 39,764,466 (-)	RGD

Sequence:

show sequence

GGAATGACAACATGTCTGTAGGCAGGCTGTGGTCTGGCCTGCTGCTCCTGCTGCTTTTTTTCTG
CTCTAGAAGTTCATCTTGTGGTCTCTCAACACATGTAGAAATAGGACACAGGGCTCTGCAGTTC
CTTCAGCTTCAAGATGGACGCATTAACTACAAAGAGCTGCTCTTAGAACACCAGGATGCATATC
AGGCAGGGACGGTGTTTCCTGATGCCTTTTACCCTAGCATCTGCAAACAAGGAAAATTCCATGA
AGTGTCTGAGAGTACTCACTGGACTCCATTTCTTAATGCCAGCATTCATTATATTCGGGAGAAC
TACCCTCTGCCCTGGGAGAAGGACACAGAGAAGTTGGTGGCTTTCTTGTTTGGAGTCACCTCCC
ACATGGTCGCTGATGTCAGCTGGCACAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGG
AGCTATTGATTTTTACGACTCTTATTCTGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTG
TTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCTGGTACGTGCCCATCCAAGATC
TTCTGAGAATTTATGATAATCTCTACGGTCGGAAAGTCATCACCAAGAATGTCATTGTTGATTG
CACATACCTTCAGTTCCTGGAAATGCACGGGGAGATGCTAGCTGTTTCCAAGCTCTATTCCACA
TACTCTACGAAGTCCCCATTTCTGGTGGAACAGTTCCAAGACTATTTCCTCGGAGGTCTAGATG
ACATGGCCTTCTGGTCCACGAACATTTACCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAG
TGACTGCAACCTGCCTGAGAACCCTCTGTTCATCTCCTGTGATGGTAGGAAGAACCACACCCTC
AGCAGCTCAAAAGTGCAGAAAAATGATTTTCACAGGAATTTGACCATGTTTATAAGTAAAGACA
TCAGGAAAAACCTCAACTACACAGAAAGAGGCGTGTTCTACAGCACAGGCTCCTGGGCCCCGGA
ATCCGTAACCTTTATGTACCAGACTCTGGAGAGGAACCTGAGGATGATGTTTACTGGCAACTCT
CAGACAGCTCTGAAGCATGTCTCCAGTCCCTCTGCCTCCTACACCCTGTCTGTCCCCTATGCCA
GGCTCGGCTGGGTCATGGCCTCAGCTGACCTCAACCAGGATGGGCACGGCGACCTCGTGGTGGG
TGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATCGGGCGGGTGTACATCATCTATGGCAAT
GATTTGGGCCTGCCCCCCATCGACCTGGACTTAGACAAGGAGGCTCATGGGGTCCTGGAGGGCT
TCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCAGTGCTGGACTTCAACAAGGATGGGCTGCC
TGATCTGGCTGTGGGTGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCTGTGTAT
GTCTACTATGGTTCCCAGCAAGGGAGGTTGTCTTCTTCCCCTAACATCACCATCTCCTGCAAGG
ACACCTACTGTAATTTGGGCTGGGCTCTCTTGGCAGCAGACGCAGATGGAGATGGCCAGCATGA
TCTGGTGATCAGTTCACCTTTTGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCTGCCTTT
TATTCACACCCCAGACGGAACGACAAAGAGTCACTGACTTTGGACGAAGCTGACTGGAAGGTGA
ACGGGGAGGAGGACTTCTCATGGTTTGGATACTCCCTTCATGGGGTCACAGTGGCAAACAGAAG
CCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATATCAGCAGGATGGCACGCTCAAGCCACCAA
AAGAACCAAGAGAAAAAGAGCCTGGGAAGGGTGTATGGCTACTTCCCCCCAAACCGGCAGAGGG
AAATCACTATCTCGGGAGATAAGGCAATGGGAAAGCTGGGTACATCCCTGTCCAGTGGTTATGT
GAGGGTGAATGGCACCCTAACCCAAGTCCTGCTGGTTGGAGCCCCTACTCATGATGACGTGTCT
AAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAGCTAGCCC
CTGAGAAGACACAGCCTGCTCTGCTCAGCACCTTCAGCGGAGACCGACGTTTTTCTCGATTTGG
TAGTGTTCTACACCTGACAGACCTGGATGACGATGGCTTAGATGAAATCATCATGGCTGCCCCA
CTGAGGATAACAGATGTCACTTCTGGACTGCTTGGGGGAGAAGATGGGCGAGTGTACATTTATA
ATGGCATGCATACCACCTTAGGTGATGTGACAGGCAAATGCAAGTCCTGGATGACTCCATGTCC
AGAGGAGAAGGCCCAGTATGTGCTAATTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCACTG
GTGTCTGTGCGGTCTAAGGAAAGGAACCAAGTGGTCGTTGCTGCTGGAAGGAGTTCTTGGGGAG
CCCGGCTCTCTGGGGCACTTCACGTCTACAGCTTCAGCTCAGATTGAAGATGTCATCTCCTAAT
CAGCCCGTCTCTTCAGCAAGTCATCTCCATGATGGCCAAAGTAGTTCTCCAGAGGAGCTCTGGT
GAAACCTGACAGAGGTGGGGCTCCTGGACAGCCAGGCTACCCGGAAATGCGGTCAGCTCTGTGT
GGACACTGGATGAGAGGGAGCAGCAGGCTTTGAGGGCAAGTCCCTCTAAAGTGCTTTTGAATCC
TCTGAGCTTGCTGCCTGTGCGTGGGACTTTATCAACCCACCCCCTTTTCTGCGGCATTACCTGC
CTCTCTAGTGTAGAAAGGGTGTAGTTAGCTCTTAACATTCTCCATATAATTGCTCCTATAAAAT
CCTTCTTCGTGGTGGCTGGTCCTATTTGGATCTTAAATGTACCCCAAATCTATGTTGAAGGCTT
GGCCCTTAGCTTAAAGAAGGTAGGAACTGAAGTGGGTCTTTGTCGGAGGAAGTTATGTTACTGG
GGTGTATCAGGACCCCAGGTCCTTCCTTGCCTCTCCACTGCCAGTTGCTGTGAAATGAGCAGCT
CTCCTCCGCCATGACATAGTGCTTCTTTCCCAGCCCCAAAGCAAAGGGCCAAGCACCCTGGAGC
TGACTTGGCTGAAACTGAGCCAAAATAAACATTTCCTCTTTTTAGGCTGTTAAAAAAAAAAAAA
AAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006253926 ⟹ XP_006253988

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,554,952 (-)	NCBI
mRatBN7.2	17	40,085,209 - 40,126,918 (-)	NCBI
Rnor_6.0	17	42,085,299 - 42,127,593 (-)	NCBI
Rnor_5.0	17	43,952,824 - 44,000,859 (-)	NCBI

Sequence:

show sequence

TCTCTCAACACATGTAGAAATAGGACACAGGGCTCTGCAGTTCCTTCAGCTTCAAGATGGACGC
ATTAACTACAAAGAGCTGCTCTTAGAACACCAGGATGCATATCAGGCAGGGACGGTGTTTCCTG
ATGCCTTTTACCCTAGCATCTGCAAACAAGGAAAATTCCATGAAGTGTCTGAGAGTACTCACTG
GACTCCATTTCTTAATGCCAGCATTCATTATATTCGGGAGAACTACCCTCTGCCCTGGGAGAAG
GACACAGAGAAGTTGGTGGCTTTCTTGTTTGGAGTCACCTCCCACATGGTCGCTGATGTCAGCT
GGCACAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTGTACGTGCCCATCCAAG
ATCTTCTGAGAATTTATGATAATCTCTACGGTCGGAAAGTCATCACCAAGAATGTCATTGTTGA
TTGCACATACCTTCAGTTCCTGGAAATGCACGGGGAGATGCTAGCTGTTTCCAAGCTCTATTCC
ACATACTCTACGAAGTCCCCATTTCTGGTGGAACAGTTCCAAGACTATTTCCTCGGAGGTCTAG
ATGACATGGCCTTCTGGTCCACGAACATTTACCGTTTGACCAGCTTTATGCTGGAGAACGGGAC
CAGTGACTGCAACCTGCCTGAGAACCCTCTGTTCATCTCCTGTGATGGTAGGAAGAACCACACC
CTCAGCAGCTCAAAAGTGCAGAAAAATGATTTTCACAGGAATTTGACCATGTTTATAAGTAAAG
ACATCAGGAAAAACCTCAACTACACAGAAAGAGGCGTGTTCTACAGCACAGGCTCCTGGGCCCC
GGAATCCGTAACCTTTATGTACCAGACTCTGGAGAGGAACCTGAGGATGATGTTTACTGGCAAC
TCTCAGACAGCTCTGAAGCATGTCTCCAGTCCCTCTGCCTCCTACACCCTGTCTGTCCCCTATG
CCAGGCTCGGCTGGGTCATGGCCTCAGCTGACCTCAACCAGGATGGGCACGGCGACCTCGTGGT
GGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATCGGGCGGGTGTACATCATCTATGGC
AATGATTTGGGCCTGCCCCCCATCGACCTGGACTTAGACAAGGAGGCTCATGGGGTCCTGGAGG
GCTTCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCAGTGCTGGACTTCAACAAGGATGGGCT
GCCTGATCTGGCTGTGGGTGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCTGTG
TATGTCTACTATGGTTCCCAGCAAGGGAGGTTGTCTTCTTCCCCTAACATCACCATCTCCTGCA
AGGACACCTACTGTAATTTGGGCTGGGCTCTCTTGGCAGCAGACGCAGATGGAGATGGCCAGCA
TGATCTGGTGATCAGTTCACCTTTTGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCTGCC
TTTTATTCACACCCCAGACGGAACGACAAAGAGTCACTGACTTTGGACGAAGCTGACTGGAAGG
TGAACGGGGAGGAGGACTTCTCATGGTTTGGATACTCCCTTCATGGGGTCACAGTGGCAAACAG
AAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATATCAGCAGGATGGCACGCTCAAGCCAC
CAAAAGAACCAAGAGAAAAAGAGCCTGGGAAGGGTGTATGGCTACTTCCCCCCAAACCGGCAGA
GGGAAATCACTATCTCGGGAGATAAGGCAATGGGAAAGCTGGGTACATCCCTGTCCAGTGGTTA
TGTGAGGGTGAATGGCACCCTAACCCAAGTCCTGCTGGTTGGAGCCCCTACTCATGATGACGTG
TCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAGCTAG
CCCCTGAGAAGACACAGCCTGCTCTGCTCAGCACCTTCAGCGGAGACCGACGTTTTTCTCGATT
TGGTAGTGTTCTACACCTGACAGACCTGGATGACGATGGCTTAGATGAAATCATCATGGCTGCC
CCACTGAGGATAACAGATGTCACTTCTGGACTGCTTGGGGGAGAAGATGGGCGAGTGTACATTT
ATAATGGCATGCATACCACCTTAGGTGATGTGACAGGCAAATGCAAGTCCTGGATGACTCCATG
TCCAGAGGAGAAGGCCCAGTATGTGCTAATTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCA
CTGGTGTCTGTGCGGTCTAAGGAAAGGAACCAAGTGGTCGTTGCTGCTGGAAGGAGTTCTTGGG
GAGCCCGGCTCTCTGGGGCACTTCACGTCTACAGCTTCAGCTCAGATTGAAGATGTCATCTCCT
AATCAGCCCGTCTCTTCAGCAAGTCATCTCCATGATGGCCAAAGTAGTTCTCCAGAGGAGCTCT
GGTGAAACCTGACAGAGGTGGGGCTCCTGGACAGCCAGGCTACCCGGAAATGCGGTCAGCTCTG
TGTGGACACTGGATGAGAGGGAGCAGCAGGCTTTGAGGGCAAGTCCCTCTAAAGTGCTTTTGAA
TCCTCTGAGCTTGCTGCCTGTGCGTGGGACTTTATCAACCCACCCCCTTTTCTGCGGCATTACC
TGCCTCTCTAGTGTAGAAAGGGTGTAGTTAGCTCTTAACATTCTCCATATAATTGCTCCTATAA
AATCCTTCTTCGTGGTGGCTGGTCCTATTTGGATCTTAA

hide sequence

RefSeq Acc Id:

XM_008771631 ⟹ XP_008769853

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,132,034 (-)	NCBI
Rnor_6.0	17	42,085,031 - 42,130,644 (-)	NCBI

Sequence:

show sequence

AACCCATGTAAAAAGGTGGATGCAGTGGCCATACCTATAATTCTGCCACTCCTATGGCAAGGTA
GGAGGTGAAGATGGACGGATCGCCCCGAAGCACCAGTTAACCTGGAGTACTCTGAGGAGCAGAA
ACATGAGGAGAGACCCTGCCCTCAAGAAGCCCAAGGATGAATACTGTTTCTTCACAGTCTTGTG
GGAGCACCCTGCTGCTTTGAGCACTGACAGTGCATCATTTGGGTGTTAAGATCACCGTCATTTA
TGTCCACGAATGACCTGGATTGTCTTCCTTGGACTGCCTGTTTCTGATTGGCTACCTCATGATG
AGTCTATTCTGAGCCCGGGTATTTTCCAGACCCTTGTCTCTTCGCCTTAAATCTGCTTCCTGCC
TCCACCTTTCAGGTGCAGTCTGTATCTTTGGGCTGCAGGAATCCTTCCTTGCAACACATCTCGG
GAAAACAGCATTATTTTGAAACGAGACTGGGCTTGGTTTCCTGTGTCAGTGACCTGTGTAGAGG
GAACACACCGAGTCTCTGCCTGGATTTTGGAGTCATAGTCTGGCTACAGCTTACGCTGACCCCA
CATTAGCAGAGCAGCTGAGGAGGAATGACAACATGTCTGTAGGCAGGCTGTGGTCTGGCCTGCT
GCTCCTGCTGCTTTTTTTCTGCTCTAGAAGTTCATCTTGTGGTCTCTCAACACATGTAGAAATA
GGACACAGGGCTCTGCAGTTCCTTCAGCTTCAAGATGGACGCATTAACTACAAAGAGCTGCTCT
TAGAACACCAGGATGCATATCAGGCAGGGACGGTGTTTCCTGATGCCTTTTACCCTAGCATCTG
CAAACAAGGAAAATTCCATGAAGTGTCTGAGAGTACTCACTGGACTCCATTTCTTAATGCCAGC
ATTCATTATATTCGGGAGAACTACCCTCTGCCCTGGGAGAAGGACACAGAGAAGTTGGTGGCTT
TCTTGTTTGGAGTCACCTCCCACATGGTCGCTGATGTCAGCTGGCACAGCCTGGGTATTGAACA
AGGGTTCCTCAGGACAATGGGAGCTATTGATTTTTACGACTCTTATTCTGAGGCTCATTCGGCT
GGTGATTTTGGAGGAGATGTGTTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCT
GGTACGTGCCCATCCAAGATCTTCTGAGAATTTATGATAATCTCTACGGTCGGAAAGTCATCAC
CAAGAATGTCATTGTTGATTGCACATACCTTCAGTTCCTGGAAATGCACGGGGAGATGCTAGCT
GTTTCCAAGCTCTATTCCACATACTCTACGAAGTCCCCATTTCTGGTGGAACAGTTCCAAGACT
ATTTCCTCGGAGGTCTAGATGACATGGCCTTCTGGTCCACGAACATTTACCGTTTGACCAGCTT
TATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCCTCTGTTCATCTCCTGTGAT
GGTAGGAAGAACCACACCCTCAGCAGCTCAAAAGTGCAGAAAAATGATTTTCACAGGAATTTGA
CCATGTTTATAAGTAAAGACATCAGGAAAAACCTCAACTACACAGAAAGAGGCGTGTTCTACAG
CACAGGCTCCTGGGCCCCGGAATCCGTAACCTTTATGTACCAGACTCTGGAGAGGAACCTGAGG
ATGATGTTTACTGGCAACTCTCAGACAGCTCTGAAGCATGTCTCCAGTCCCTCTGCCTCCTACA
CCCTGTCTGTCCCCTATGCCAGGCTCGGCTGGGTCATGGCCTCAGCTGACCTCAACCAGGATGG
GCACGGCGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATCGGGCGG
GTGTACATCATCTATGGCAATGATTTGGGCCTGCCCCCCATCGACCTGGACTTAGACAAGGAGG
CTCATGGGGTCCTGGAGGGCTTCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCAGTGCTGGA
CTTCAACAAGGATGGGCTGCCTGATCTGGCTGTGGGTGCTCCCTCCGTGGGCTCAGGGCAGCTC
ACCTACAATGGCTCTGTGTATGTCTACTATGGTTCCCAGCAAGGGAGGTTGTCTTCTTCCCCTA
ACATCACCATCTCCTGCAAGGACACCTACTGTAATTTGGGCTGGGCTCTCTTGGCAGCAGACGC
AGATGGAGATGGCCAGCATGATCTGGTGATCAGTTCACCTTTTGCACCAGGTGGAGGGAAGCAG
AGAGGAATTGTGGCTGCCTTTTATTCACACCCCAGACGGAACGACAAAGAGTCACTGACTTTGG
ACGAAGCTGACTGGAAGGTGAACGGGGAGGAGGACTTCTCATGGTTTGGATACTCCCTTCATGG
GGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATATCAGCAGG
ATGGCACGCTCAAGCCACCAAAAGAACCAAGAGAAAAAGAGCCTGGGAAGGGTGTATGGCTACT
TCCCCCCAAACCGGCAGAGGGAAATCACTATCTCGGGAGATAAGGCAATGGGAAAGCTGGGTAC
ATCCCTGTCCAGTGGTTATGTGAGGGTGAATGGCACCCTAACCCAAGTCCTGCTGGTTGGAGCC
CCTACTCATGATGACGTGTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCA
CTCGGATGTACGAGCTAGCCCCTGAGAAGACACAGCCTGCTCTGCTCAGCACCTTCAGCGGAGA
CCGACGTTTTTCTCGATTTGGTAGTGTTCTACACCTGACAGACCTGGATGACGATGGCTTAGAT
GAAATCATCATGGCTGCCCCACTGAGGATAACAGATGTCACTTCTGGACTGCTTGGGGGAGAAG
ATGGGCGAGTGTACATTTATAATGGCATGCATACCACCTTAGGTGATGTGACAGGCAAATGCAA
GTCCTGGATGACTCCATGTCCAGAGGAGAAGGCCCAGTATGTGCTAATTTCTCCAGAGGCAAGT
TCAAGGTTTGGGAGCTCACTGGTGTCTGTGCGGTCTAAGGAAAGGAACCAAGTGGTCGTTGCTG
CTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCACGTCTACAGCTTCAGCTCAGA
TTGAAGATGTCATCTCCTAATCAGCCCGTCTCTTCAGCAAGTCATCTCCATGATGGCCAAAGTA
GTTCTCCAGAGGAGCTCTGGTGAAACCTGACAGAGGTGGGGCTCCTGGACAGCCAGGCTACCCG
GAAATGCGGTCAGCTCTGTGTGGACACTGGATGAGAGGGAGCAGCAGGCTTTGAGGGCAAGTCC
CTCTAAAGTGCTTTTGAATCCTCTGAGCTTGCTGCCTGTGCGTGGGACTTTATCAACCCACCCC
CTTTTCTGCGGCATTACCTGCCTCTCTAGTGTAGAAAGGGTGTAGTTAGCTCTTAACATTCTCC
ATATAATTGCTCCTATAAAATCCTTCTTCGTGGTGGCTGGTCCTATTTGGATCTTAAATGTACC
CCAAATCTATGTTGAAGGCTTGGCCCTTAGCTTAAAGAAGGTAGGAACTGAAGTGGGTCTTTGT
CGGAGGAAGTTATGTTACTGGGGTGTATCAGGACCCCAGGTCCTTCCTTGCCTCTCCACTGCCA
GTTGCTGTGAAATGAGCAGCTCTCCTCCGCCATGACATAGTGCTTCTTTCCCAGCCCCAAAGCA
AAGGGCCAAGCACCCTGGAGCTGACTTGGCTGAAACTGAGCCAAAATAAACATTTCCTCTTTTT
AGGCT

hide sequence

RefSeq Acc Id:

XM_008771635 ⟹ XP_008769857

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,085,209 - 40,132,034 (-)	NCBI
Rnor_6.0	17	42,085,299 - 42,130,644 (-)	NCBI

Sequence:

show sequence

AACCCATGTAAAAAGGTGGATGCAGTGGCCATACCTATAATTCTGCCACTCCTATGGCAAGGTA
GGAGGTGAAGATGGACGGATCGCCCCGAAGCACCAGTTAACCTGGAGTACTCTGAGGAGCAGAA
ACATGAGGAGAGACCCTGCCCTCAAGAAGCCCAAGGATGAATACTGTTTCTTCACAGTCTTGTG
GGAGCACCCTGCTGCTTTGAGCACTGACAGTGCATCATTTGGGTGTTAAGATCACCGTCATTTA
TGTCCACGAATGACCTGGATTGTCTTCCTTGGACTGCCTGTTTCTGATTGGCTACCTCATGATG
AGTCTATTCTGAGCCCGGGTATTTTCCAGACCCTTGTCTCTTCGCCTTAAATCTGCTTCCTGCC
TCCACCTTTCAGGTGCAGTCTGTATCTTTGGGCTGCAGGAATCCTTCCTTGCAACACATCTCGG
GTGGACAGTTTGTTTGCTGTTCTGGAAAAGCTAAACAGTGGGTGATCCGTTGACTTCATTGACT
TCATAGGAAAACAGCATTATTTTGAAACGAGACTGGGCTTGGTTTCCTGTGTCAGTGACCTGTG
TAGAGGGAACACACCGAGTCTCTGCCTGGATTTTGGAGTCATAGTCTGGCTACAGCTTACGCTG
ACCCCACATTAGCAGAGCAGCTGAGGAGGAATGACAACATGTCTGTAGGCAGGCTGTGGTCTGG
CCTGCTGCTCCTGCTGCTTTTTTTCTGCTCTAGAAGTTCATCTTGTGGTCTCTCAACACATGTA
GAAATAGGACACAGGGCTCTGCAGTTCCTTCAGCTTCAAGATGGACGCATTAACTACAAAGAGC
TGCTCTTAGAACACCAGGATGCATATCAGGCAGGGACGGTGTTTCCTGATGCCTTTTACCCTAG
CATCTGCAAACAAGGAAAATTCCATGAAGTGTCTGAGAGTACTCACTGGACTCCATTTCTTAAT
GCCAGCATTCATTATATTCGGGAGAACTACCCTCTGCCCTGGGAGAAGGACACAGAGAAGTTGG
TGGCTTTCTTGTTTGGAGTCACCTCCCACATGGTCGCTGATGTCAGCTGGCACAGCCTGGGTAT
TGAACAAGGGTTCCTCAGGACAATGGGAGCTATTGATTTTTACGACTCTTATTCTGAGGCTCAT
TCGGCTGGTGATTTTGGAGGAGATGTGTTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCAC
GGCGCTGGTACGTGCCCATCCAAGATCTTCTGAGAATTTATGATAATCTCTACGGTCGGAAAGT
CATCACCAAGAATGTCATTGTTGATTGCACATACCTTCAGTTCCTGGAAATGCACGGGGAGATG
CTAGCTGTTTCCAAGCTCTATTCCACATACTCTACGAAGTCCCCATTTCTGGTGGAACAGTTCC
AAGACTATTTCCTCGGAGGTCTAGATGACATGGCCTTCTGGTCCACGAACATTTACCGTTTGAC
CAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCCTCTGTTCATCTCC
TGTGATGGTAGGAAGAACCACACCCTCAGCTCAAAAGTGCAGAAAAATGATTTTCACAGGAATT
TGACCATGTTTATAAGTAAAGACATCAGGAAAAACCTCAACTACACAGAAAGAGGCGTGTTCTA
CAGCACAGGCTCCTGGGCCCCGGAATCCGTAACCTTTATGTACCAGACTCTGGAGAGGAACCTG
AGGATGATGTTTACTGGCAACTCTCAGACAGCTCTGAAGCATGTCTCCAGTCCCTCTGCCTCCT
ACACCCTGTCTGTCCCCTATGCCAGGCTCGGCTGGGTCATGGCCTCAGCTGACCTCAACCAGGA
TGGGCACGGCGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATCGGG
CGGGTGTACATCATCTATGGCAATGATTTGGGCCTGCCCCCCATCGACCTGGACTTAGACAAGG
AGGCTCATGGGGTCCTGGAGGGCTTCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCAGTGCT
GGACTTCAACAAGGATGGGCTGCCTGATCTGGCTGTGGGTGCTCCCTCCGTGGGCTCAGGGCAG
CTCACCTACAATGGCTCTGTGTATGTCTACTATGGTTCCCAGCAAGGGAGGTTGTCTTCTTCCC
CTAACATCACCATCTCCTGCAAGGACACCTACTGTAATTTGGGCTGGGCTCTCTTGGCAGCAGA
CGCAGATGGAGATGGCCAGCATGATCTGGTGATCAGTTCACCTTTTGCACCAGGTGGAGGGAAG
CAGAGAGGAATTGTGGCTGCCTTTTATTCACACCCCAGACGGAACGACAAAGAGTCACTGACTT
TGGACGAAGCTGACTGGAAGGTGAACGGGGAGGAGGACTTCTCATGGTTTGGATACTCCCTTCA
TGGGGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATATCAGC
AGGATGGCACGCTCAAGCCACCAAAAGAACCAAGAGAAAAAGAGCCTGGGAAGGGTGTATGGCT
ACTTCCCCCCAAACCGGCAGAGGGAAATCACTATCTCGGGAGATAAGGCAATGGGAAAGCTGGG
TACATCCCTGTCCAGTGGTTATGTGAGGGTGAATGGCACCCTAACCCAAGTCCTGCTGGTTGGA
GCCCCTACTCATGATGACGTGTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAG
CCACTCGGATGTACGAGCTAGCCCCTGAGAAGACACAGCCTGCTCTGCTCAGCACCTTCAGCGG
AGACCGACGTTTTTCTCGATTTGGTAGTGTTCTACACCTGACAGACCTGGATGACGATGGCTTA
GATGAAATCATCATGGCTGCCCCACTGAGGATAACAGATGTCACTTCTGGACTGCTTGGGGGAG
AAGATGGGCGAGTGTACATTTATAATGGCATGCATACCACCTTAGGTGATGTGACAGGCAAATG
CAAGTCCTGGATGACTCCATGTCCAGAGGAGAAGGCCCAGTATGTGCTAATTTCTCCAGAGGCA
AGTTCAAGGTTTGGGAGCTCACTGGTGTCTGTGCGGTCTAAGGAAAGGAACCAAGTGGTCGTTG
CTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCACGTCTACAGCTTCAGCTC
AGATTGAAGATGTCATCTCCTAATCAGCCCGTCTCTTCAGCAAGTCATCTCCATGATGGCCAAA
GTAGTTCTCCAGAGGAGCTCTGGTGAAACCTGACAGAGGTGGGGCTCCTGGACAGCCAGGCTAC
CCGGAAATGCGGTCAGCTCTGTGTGGACACTGGATGAGAGGGAGCAGCAGGCTTTGAGGGCAAG
TCCCTCTAAAGTGCTTTTGAATCCTCTGAGCTTGCTGCCTGTGCGTGGGACTTTATCAACCCAC
CCCCTTTTCTGCGGCATTACCTGCCTCTCTAGTGTAGAAAGGGTGTAGTTAGCTCTTAACATTC
TCCATATAATTGCTCCTATAAAATCCTTCTTCGTGGTGGCTGGTCCTATTTGGATCTTAA

hide sequence

RefSeq Acc Id:

XM_017600481 ⟹ XP_017455970

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,132,034 (-)	NCBI
Rnor_6.0	17	42,085,031 - 42,130,644 (-)	NCBI

Sequence:

show sequence

AACCCATGTAAAAAGGTGGATGCAGTGGCCATACCTATAATTCTGCCACTCCTATGGCAAGGTA
GGAGGTGAAGATGGACGGATCGCCCCGAAGCACCAGTTAACCTGGAGTACTCTGAGGAGCAGAA
ACATGAGGAGAGACCCTGCCCTCAAGAAGTCTTGTGGGAGCACCCTGCTGCTTTGAGCACTGAC
AGTGCATCATTTGGGTGTTAAGATCACCGTCATTTATGTCCACGAATGACCTGGATTGTCTTCC
TTGGACTGCCTGTTTCTGATTGGCTACCTCATGATGAGTCTATTCTGAGCCCGGGTATTTTCCA
GACCCTTGTCTCTTCGCCTTAAATCTGCTTCCTGCCTCCACCTTTCAGGTGCAGTCTGTATCTT
TGGGCTGCAGGAATCCTTCCTTGCAACACATCTCGGGTGGACAGTTTGTTTGCTGTTCTGGAAA
AGCTAAACAGTGGGTGATCCGTTGACTTCATTGACTTCATAGGAAAACAGCATTATTTTGAAAC
GAGACTGGGCTTGGTTTCCTGTGTCAGTGACCTGTGTAGAGGGAACACACCGAGTCTCTGCCTG
GATTTTGGAGTCATAGTCTGGCTACAGCTTACGCTGACCCCACATTAGCAGAGCAGCTGAGGAG
GAATGACAACATGTCTGTAGGCAGGCTGTGGTCTGGCCTGCTGCTCCTGCTGCTTTTTTTCTGC
TCTAGAAGTTCATCTTGTGGTCTCTCAACACATGTAGAAATAGGACACAGGGCTCTGCAGTTCC
TTCAGCTTCAAGATGGACGCATTAACTACAAAGAGCTGCTCTTAGAACACCAGGATGCATATCA
GGCAGGGACGGTGTTTCCTGATGCCTTTTACCCTAGCATCTGCAAACAAGGAAAATTCCATGAA
GTGTCTGAGAGTACTCACTGGACTCCATTTCTTAATGCCAGCATTCATTATATTCGGGAGAACT
ACCCTCTGCCCTGGGAGAAGGACACAGAGAAGTTGGTGGCTTTCTTGTTTGGAGTCACCTCCCA
CATGGTCGCTGATGTCAGCTGGCACAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGA
GCTATTGATTTTTACGACTCTTATTCTGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTGT
TGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCTGGTACGTGCCCATCCAAGATCT
TCTGAGAATTTATGATAATCTCTACGGTCGGAAAGTCATCACCAAGAATGTCATTGTTGATTGC
ACATACCTTCAGTTCCTGGAAATGCACGGGGAGATGCTAGCTGTTTCCAAGCTCTATTCCACAT
ACTCTACGAAGTCCCCATTTCTGGTGGAACAGTTCCAAGACTATTTCCTCGGAGGTCTAGATGA
CATGGCCTTCTGGTCCACGAACATTTACCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAGT
GACTGCAACCTGCCTGAGAACCCTCTGTTCATCTCCTGTGATGGTAGGAAGAACCACACCCTCA
GCAGCTCAAAAGTGCAGAAAAATGATTTTCACAGGAATTTGACCATGTTTATAAGTAAAGACAT
CAGGAAAAACCTCAACTACACAGAAAGAGGCGTGTTCTACAGCACAGGCTCCTGGGCCCCGGAA
TCCGTAACCTTTATGTACCAGACTCTGGAGAGGAACCTGAGGATGATGTTTACTGGCAACTCTC
AGACAGCTCTGAAGCATGTCTCCAGTCCCTCTGCCTCCTACACCCTGTCTGTCCCCTATGCCAG
GCTCGGCTGGGTCATGGCCTCAGCTGACCTCAACCAGGATGGGCACGGCGACCTCGTGGTGGGT
GCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATCGGGCGGGTGTACATCATCTATGGCAATG
ATTTGGGCCTGCCCCCCATCGACCTGGACTTAGACAAGGAGGCTCATGGGGTCCTGGAGGGCTT
CCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCAGTGCTGGACTTCAACAAGGATGGGCTGCCT
GATCTGGCTGTGGGTGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCTGTGTATG
TCTACTATGGTTCCCAGCAAGGGAGGTTGTCTTCTTCCCCTAACATCACCATCTCCTGCAAGGA
CACCTACTGTAATTTGGGCTGGGCTCTCTTGGCAGCAGACGCAGATGGAGATGGCCAGCATGAT
CTGGTGATCAGTTCACCTTTTGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCTGCCTTTT
ATTCACACCCCAGACGGAACGACAAAGAGTCACTGACTTTGGACGAAGCTGACTGGAAGGTGAA
CGGGGAGGAGGACTTCTCATGGTTTGGATACTCCCTTCATGGGGTCACAGTGGCAAACAGAAGC
CTGCTGCTGATTGGGAGCCCGACCTGGAAGAATATCAGCAGGATGGCACGCTCAAGCCACCAAA
AGAACCAAGAGAAAAAGAGCCTGGGAAGGGTGTATGGCTACTTCCCCCCAAACCGGCAGAGGGA
AATCACTATCTCGGGAGATAAGGCAATGGGAAAGCTGGGTACATCCCTGTCCAGTGGTTATGTG
AGGGTGAATGGCACCCTAACCCAAGTCCTGCTGGTTGGAGCCCCTACTCATGATGACGTGTCTA
AAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAGCTAGCCCC
TGAGAAGACACAGCCTGCTCTGCTCAGCACCTTCAGCGGAGACCGACGTTTTTCTCGATTTGGT
AGTGTTCTACACCTGACAGACCTGGATGACGATGGCTTAGATGAAATCATCATGGCTGCCCCAC
TGAGGATAACAGATGTCACTTCTGGACTGCTTGGGGGAGAAGATGGGCGAGTGTACATTTATAA
TGGCATGCATACCACCTTAGGTGATGTGACAGGCAAATGCAAGTCCTGGATGACTCCATGTCCA
GAGGAGAAGGCCCAGTATGTGCTAATTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCACTGG
TGTCTGTGCGGTCTAAGGAAAGGAACCAAGTGGTCGTTGCTGCTGGAAGGAGTTCTTGGGGAGC
CCGGCTCTCTGGGGCACTTCACGTCTACAGCTTCAGCTCAGATTGAAGATGTCATCTCCTAATC
AGCCCGTCTCTTCAGCAAGTCATCTCCATGATGGCCAAAGTAGTTCTCCAGAGGAGCTCTGGTG
AAACCTGACAGAGGTGGGGCTCCTGGACAGCCAGGCTACCCGGAAATGCGGTCAGCTCTGTGTG
GACACTGGATGAGAGGGAGCAGCAGGCTTTGAGGGCAAGTCCCTCTAAAGTGCTTTTGAATCCT
CTGAGCTTGCTGCCTGTGCGTGGGACTTTATCAACCCACCCCCTTTTCTGCGGCATTACCTGCC
TCTCTAGTGTAGAAAGGGTGTAGTTAGCTCTTAACATTCTCCATATAATTGCTCCTATAAAATC
CTTCTTCGTGGTGGCTGGTCCTATTTGGATCTTAAATGTACCCCAAATCTATGTTGAAGGCTTG
GCCCTTAGCTTAAAGAAGGTAGGAACTGAAGTGGGTCTTTGTCGGAGGAAGTTATGTTACTGGG
GTGTATCAGGACCCCAGGTCCTTCCTTGCCTCTCCACTGCCAGTTGCTGTGAAATGAGCAGCTC
TCCTCCGCCATGACATAGTGCTTCTTTCCCAGCCCCAAAGCAAAGGGCCAAGCACCCTGGAGCT
GACTTGGCTGAAACTGAGCCAAAATAAACATTTCCTCTTTTTAGGCT

hide sequence

RefSeq Acc Id:

XM_017600483 ⟹ XP_017455972

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,127,544 (-)	NCBI
Rnor_6.0	17	42,085,031 - 42,130,644 (-)	NCBI

Sequence:

show sequence

AACCCATGTAAAAAGGTGGATGCAGTGGCCATACCTATAATTCTGCCACTCCTATGGCAAGGTA
GGAGGTGAAGATGGACGGATCGCCCCGAAGCACCAGTTAACCTGGAGTACTCTGAGGAGCAGAA
ACATGAGGAGAGACCCTGCCCTCAAGAAGGTGCAGTCTGTATCTTTGGGCTGCAGGAATCCTTC
CTTGCAACACATCTCGGGTAAGTCCTGTTGGAAGAGCCGGAGTAGAAGACCAGGAGTGGCTGGG
CTTGTGTAACATGCTGACCTGTCAGTATCTGTTGCCAAATAACGAAAAGAGAAGCCGGTTCTAG
GTGATCACCATAAAGGCTTTCCCAGCATGCACTTGGGGCTTGGGAGGATGAGGAAACTCTGATA
AAAGTGTGAGGAAAGTATATCGGAGATGCTGCTCGTGGACAGGGAGGTAGAATCAGAGTGACTG
TCAGCTGGCACAGGTGGACAGTTTGTTTGCTGTTCTGGAAAAGCTAAACAGTGGGTGATCCGTT
GACTTCATTGACTTCATAGGAAAACAGCATTATTTTGAAACGAGACTGGGCTTGGTTTCCTGTG
TCAGTGACCTGTGTAGAGGGAACACACCGAGTCTCTGCCTGGATTTTGGAGTCATAGTCTGGCT
ACAGCTTACGCTGACCCCACATTAGCAGAGCAGCTGAGGAGGAATGACAACATGTCTGTAGGCA
GGCTGTGGTCTGGCCTGCTGCTCCTGCTGCTTTTTTTCTGCTCTAGAAGTTCATCTTGTGGTCT
CTCAACACATGTAGAAATAGGACACAGGGCTCTGCAGTTCCTTCAGCTTCAAGATGGACGCATT
AACTACAAAGAGCTGCTCTTAGAACACCAGGATGCATATCAGGCAGGGACGGTGTTTCCTGATG
CCTTTTACCCTAGCATCTGCAAACAAGGAAAATTCCATGAAGTGTCTGAGAGTACTCACTGGAC
TCCATTTCTTAATGCCAGCATTCATTATATTCGGGAGAACTACCCTCTGCCCTGGGAGAAGGAC
ACAGAGAAGTTGGTGGCTTTCTTGTTTGGAGTCACCTCCCACATGGTCGCTGATGTCAGCTGGC
ACAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTATTGATTTTTACGACTCTTA
TTCTGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTGTTGAGCCAGTTTGAATTTAATTTT
AATTACCTCTCACGGCGCTGGTACGTGCCCATCCAAGATCTTCTGAGAATTTATGATAATCTCT
ACGGTCGGAAAGTCATCACCAAGAATGTCATTGTTGATTGCACATACCTTCAGTTCCTGGAAAT
GCACGGGGAGATGCTAGCTGTTTCCAAGCTCTATTCCACATACTCTACGAAGTCCCCATTTCTG
GTGGAACAGTTCCAAGACTATTTCCTCGGAGGTCTAGATGACATGGCCTTCTGGTCCACGAACA
TTTACCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCC
TCTGTTCATCTCCTGTGATGGTAGGAAGAACCACACCCTCAGCAGCTCAAAAGTGCAGAAAAAT
GATTTTCACAGGAATTTGACCATGTTTATAAGTAAAGACATCAGGAAAAACCTCAACTACACAG
AAAGAGGCGTGTTCTACAGCACAGGCTCCTGGGCCCCGGAATCCGTAACCTTTATGTACCAGAC
TCTGGAGAGGAACCTGAGGATGATGTTTACTGGCAACTCTCAGACAGCTCTGAAGCATGTCTCC
AGTCCCTCTGCCTCCTACACCCTGTCTGTCCCCTATGCCAGGCTCGGCTGGGTCATGGCCTCAG
CTGACCTCAACCAGGATGGGCACGGCGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGG
CCGCTTCCAGATCGGGCGGGTGTACATCATCTATGGCAATGATTTGGGCCTGCCCCCCATCGAC
CTGGACTTAGACAAGGAGGCTCATGGGGTCCTGGAGGGCTTCCAGCCTTCAGGTCGCTTTGGCT
CAGCTTTGGCAGTGCTGGACTTCAACAAGGATGGGCTGCCTGATCTGGCTGTGGGTGCTCCCTC
CGTGGGCTCAGGGCAGCTCACCTACAATGGCTCTGTGTATGTCTACTATGGTTCCCAGCAAGGG
AGGTTGTCTTCTTCCCCTAACATCACCATCTCCTGCAAGGACACCTACTGTAATTTGGGCTGGG
CTCTCTTGGCAGCAGACGCAGATGGAGATGGCCAGCATGATCTGGTGATCAGTTCACCTTTTGC
ACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCTGCCTTTTATTCACACCCCAGACGGAACGAC
AAAGAGTCACTGACTTTGGACGAAGCTGACTGGAAGGTGAACGGGGAGGAGGACTTCTCATGGT
TTGGATACTCCCTTCATGGGGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGAC
CTGGAAGAATATCAGCAGGATGGCACGCTCAAGCCACCAAAAGAACCAAGAGAAAAAGAGCCTG
GGAAGGGTGTATGGCTACTTCCCCCCAAACCGGCAGAGGGAAATCACTATCTCGGGAGATAAGG
CAATGGGAAAGCTGGGTACATCCCTGTCCAGTGGTTATGTGAGGGTGAATGGCACCCTAACCCA
AGTCCTGCTGGTTGGAGCCCCTACTCATGATGACGTGTCTAAAATGGCATTCCTAACCATGACC
CTGCACCAGGGTGGAGCCACTCGGATGTACGAGCTAGCCCCTGAGAAGACACAGCCTGCTCTGC
TCAGCACCTTCAGCGGAGACCGACGTTTTTCTCGATTTGGTAGTGTTCTACACCTGACAGACCT
GGATGACGATGGCTTAGATGAAATCATCATGGCTGCCCCACTGAGGATAACAGATGTCACTTCT
GGACTGCTTGGGGGAGAAGATGGGCGAGTGTACATTTATAATGGCATGCATACCACCTTAGGTG
ATGTGACAGGCAAATGCAAGTCCTGGATGACTCCATGTCCAGAGGAGAAGGCCCAGTATGTGCT
AATTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCACTGGTGTCTGTGCGGTCTAAGGAAAGG
AACCAAGTGGTCGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCACG
TCTACAGCTTCAGCTCAGATTGAAGATGTCATCTCCTAATCAGCCCGTCTCTTCAGCAAGTCAT
CTCCATGATGGCCAAAGTAGTTCTCCAGAGGAGCTCTGGTGAAACCTGACAGAGGTGGGGCTCC
TGGACAGCCAGGCTACCCGGAAATGCGGTCAGCTCTGTGTGGACACTGGATGAGAGGGAGCAGC
AGGCTTTGAGGGCAAGTCCCTCTAAAGTGCTTTTGAATCCTCTGAGCTTGCTGCCTGTGCGTGG
GACTTTATCAACCCACCCCCTTTTCTGCGGCATTACCTGCCTCTCTAGTGTAGAAAGGGTGTAG
TTAGCTCTTAACATTCTCCATATAATTGCTCCTATAAAATCCTTCTTCGTGGTGGCTGGTCCTA
TTTGGATCTTAAATGTACCCCAAATCTATGTTGAAGGCTTGGCCCTTAGCTTAAAGAAGGTAGG
AACTGAAGTGGGTCTTTGTCGGAGGAAGTTATGTTACTGGGGTGTATCAGGACCCCAGGTCCTT
CCTTGCCTCTCCACTGCCAGTTGCTGTGAAATGAGCAGCTCTCCTCCGCCATGACATAGTGCTT
CTTTCCCAGCCCCAAAGCAAAGGGCCAAGCACCCTGGAGCTGACTTGGCTGAAACTGAGCCAAA
ATAAACATTTCCTCTTTTTAGGCT

hide sequence

RefSeq Acc Id:

XM_017600484 ⟹ XP_017455973

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,132,034 (-)	NCBI
Rnor_6.0	17	42,085,031 - 42,130,644 (-)	NCBI

Sequence:

show sequence

AACCCATGTAAAAAGGTGGATGCAGTGGCCATACCTATAATTCTGCCACTCCTATGGCAAGGTA
GGAGGTGAAGATGGACGGATCGCCCCGAAGCACCAGTTAACCTGGAGTACTCTGAGGAGCAGAA
ACATGAGGAGAGACCCTGCCCTCAAGAAGGTGCAGTCTGTATCTTTGGGCTGCAGGAATCCTTC
CTTGCAACACATCTCGGGAAAACAGCATTATTTTGAAACGAGACTGGGCTTGGTTTCCTGTGTC
AGTGACCTGTGTAGAGGGAACACACCGAGTCTCTGCCTGGATTTTGGAGTCATAGTCTGGCTAC
AGCTTACGCTGACCCCACATTAGCAGAGCAGCTGAGGAGGAATGACAACATGTCTGTAGGCAGG
CTGTGGTCTGGCCTGCTGCTCCTGCTGCTTTTTTTCTGCTCTAGAAGTTCATCTTGTGGTCTCT
CAACACATGTAGAAATAGGACACAGGGCTCTGCAGTTCCTTCAGCTTCAAGATGGACGCATTAA
CTACAAAGAGCTGCTCTTAGAACACCAGGATGCATATCAGGCAGGGACGGTGTTTCCTGATGCC
TTTTACCCTAGCATCTGCAAACAAGGAAAATTCCATGAAGTGTCTGAGAGTACTCACTGGACTC
CATTTCTTAATGCCAGCATTCATTATATTCGGGAGAACTACCCTCTGCCCTGGGAGAAGGACAC
AGAGAAGTTGGTGGCTTTCTTGTTTGGAGTCACCTCCCACATGGTCGCTGATGTCAGCTGGCAC
AGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTATTGATTTTTACGACTCTTATT
CTGAGGCTCATTCGGCTGGTGATTTTGGAGGAGATGTGTTGAGCCAGTTTGAATTTAATTTTAA
TTACCTCTCACGGCGCTGGTACGTGCCCATCCAAGATCTTCTGAGAATTTATGATAATCTCTAC
GGTCGGAAAGTCATCACCAAGAATGTCATTGTTGATTGCACATACCTTCAGTTCCTGGAAATGC
ACGGGGAGATGCTAGCTGTTTCCAAGCTCTATTCCACATACTCTACGAAGTCCCCATTTCTGGT
GGAACAGTTCCAAGACTATTTCCTCGGAGGTCTAGATGACATGGCCTTCTGGTCCACGAACATT
TACCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCCTC
TGTTCATCTCCTGTGATGGTAGGAAGAACCACACCCTCAGCAGCTCAAAAGTGCAGAAAAATGA
TTTTCACAGGAATTTGACCATGTTTATAAGTAAAGACATCAGGAAAAACCTCAACTACACAGAA
AGAGGCGTGTTCTACAGCACAGGCTCCTGGGCCCCGGAATCCGTAACCTTTATGTACCAGACTC
TGGAGAGGAACCTGAGGATGATGTTTACTGGCAACTCTCAGACAGCTCTGAAGCATGTCTCCAG
TCCCTCTGCCTCCTACACCCTGTCTGTCCCCTATGCCAGGCTCGGCTGGGTCATGGCCTCAGCT
GACCTCAACCAGGATGGGCACGGCGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCC
GCTTCCAGATCGGGCGGGTGTACATCATCTATGGCAATGATTTGGGCCTGCCCCCCATCGACCT
GGACTTAGACAAGGAGGCTCATGGGGTCCTGGAGGGCTTCCAGCCTTCAGGTCGCTTTGGCTCA
GCTTTGGCAGTGCTGGACTTCAACAAGGATGGGCTGCCTGATCTGGCTGTGGGTGCTCCCTCCG
TGGGCTCAGGGCAGCTCACCTACAATGGCTCTGTGTATGTCTACTATGGTTCCCAGCAAGGGAG
GTTGTCTTCTTCCCCTAACATCACCATCTCCTGCAAGGACACCTACTGTAATTTGGGCTGGGCT
CTCTTGGCAGCAGACGCAGATGGAGATGGCCAGCATGATCTGGTGATCAGTTCACCTTTTGCAC
CAGGTGGAGGGAAGCAGAGAGGAATTGTGGCTGCCTTTTATTCACACCCCAGACGGAACGACAA
AGAGTCACTGACTTTGGACGAAGCTGACTGGAAGGTGAACGGGGAGGAGGACTTCTCATGGTTT
GGATACTCCCTTCATGGGGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGACCT
GGAAGAATATCAGCAGGATGGCACGCTCAAGCCACCAAAAGAACCAAGAGAAAAAGAGCCTGGG
AAGGGTGTATGGCTACTTCCCCCCAAACCGGCAGAGGGAAATCACTATCTCGGGAGATAAGGCA
ATGGGAAAGCTGGGTACATCCCTGTCCAGTGGTTATGTGAGGGTGAATGGCACCCTAACCCAAG
TCCTGCTGGTTGGAGCCCCTACTCATGATGACGTGTCTAAAATGGCATTCCTAACCATGACCCT
GCACCAGGGTGGAGCCACTCGGATGTACGAGCTAGCCCCTGAGAAGACACAGCCTGCTCTGCTC
AGCACCTTCAGCGGAGACCGACGTTTTTCTCGATTTGGTAGTGTTCTACACCTGACAGACCTGG
ATGACGATGGCTTAGATGAAATCATCATGGCTGCCCCACTGAGGATAACAGATGTCACTTCTGG
ACTGCTTGGGGGAGAAGATGGGCGAGTGTACATTTATAATGGCATGCATACCACCTTAGGTGAT
GTGACAGGCAAATGCAAGTCCTGGATGACTCCATGTCCAGAGGAGAAGGCCCAGTATGTGCTAA
TTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCACTGGTGTCTGTGCGGTCTAAGGAAAGGAA
CCAAGTGGTCGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCACGTC
TACAGCTTCAGCTCAGATTGAAGATGTCATCTCCTAATCAGCCCGTCTCTTCAGCAAGTCATCT
CCATGATGGCCAAAGTAGTTCTCCAGAGGAGCTCTGGTGAAACCTGACAGAGGTGGGGCTCCTG
GACAGCCAGGCTACCCGGAAATGCGGTCAGCTCTGTGTGGACACTGGATGAGAGGGAGCAGCAG
GCTTTGAGGGCAAGTCCCTCTAAAGTGCTTTTGAATCCTCTGAGCTTGCTGCCTGTGCGTGGGA
CTTTATCAACCCACCCCCTTTTCTGCGGCATTACCTGCCTCTCTAGTGTAGAAAGGGTGTAGTT
AGCTCTTAACATTCTCCATATAATTGCTCCTATAAAATCCTTCTTCGTGGTGGCTGGTCCTATT
TGGATCTTAAATGTACCCCAAATCTATGTTGAAGGCTTGGCCCTTAGCTTAAAGAAGGTAGGAA
CTGAAGTGGGTCTTTGTCGGAGGAAGTTATGTTACTGGGGTGTATCAGGACCCCAGGTCCTTCC
TTGCCTCTCCACTGCCAGTTGCTGTGAAATGAGCAGCTCTCCTCCGCCATGACATAGTGCTTCT
TTCCCAGCCCCAAAGCAAAGGGCCAAGCACCCTGGAGCTGACTTGGCTGAAACTGAGCCAAAAT
AAACATTTCCTCTTTTTAGGCT

hide sequence

RefSeq Acc Id:

XM_039095513 ⟹ XP_038951441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,040 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,132,034 (-)	NCBI

RefSeq Acc Id:

XM_039095514 ⟹ XP_038951442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,040 (-)	NCBI
mRatBN7.2	17	40,084,620 - 40,132,034 (-)	NCBI

RefSeq Acc Id:

XM_063276185 ⟹ XP_063132255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,591 (-)	NCBI

RefSeq Acc Id:

XM_063276186 ⟹ XP_063132256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI

RefSeq Acc Id:

XM_063276187 ⟹ XP_063132257

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,483 (-)	NCBI

RefSeq Acc Id:

XM_063276188 ⟹ XP_063132258

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,483 (-)	NCBI

RefSeq Acc Id:

XM_063276189 ⟹ XP_063132259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI

RefSeq Acc Id:

XM_063276190 ⟹ XP_063132260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI

RefSeq Acc Id:

XM_063276191 ⟹ XP_063132261

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,483 (-)	NCBI

RefSeq Acc Id:

XM_063276192 ⟹ XP_063132262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,558,506 (-)	NCBI

RefSeq Acc Id:

XM_063276193 ⟹ XP_063132263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,560,451 (-)	NCBI

RefSeq Acc Id:

XM_063276194 ⟹ XP_063132264

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,512,659 - 40,554,952 (-)	NCBI

RefSeq Acc Id:

XR_005495254

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	40,518,348 - 40,558,506 (-)	NCBI
mRatBN7.2	17	40,090,307 - 40,132,035 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001093982	(Get FASTA)	NCBI Sequence Viewer
	XP_006253988	(Get FASTA)	NCBI Sequence Viewer
	XP_008769853	(Get FASTA)	NCBI Sequence Viewer
	XP_008769857	(Get FASTA)	NCBI Sequence Viewer
	XP_017455970	(Get FASTA)	NCBI Sequence Viewer
	XP_017455972	(Get FASTA)	NCBI Sequence Viewer
	XP_017455973	(Get FASTA)	NCBI Sequence Viewer
	XP_038951441	(Get FASTA)	NCBI Sequence Viewer
	XP_038951442	(Get FASTA)	NCBI Sequence Viewer
	XP_063132255	(Get FASTA)	NCBI Sequence Viewer
	XP_063132256	(Get FASTA)	NCBI Sequence Viewer
	XP_063132257	(Get FASTA)	NCBI Sequence Viewer
	XP_063132258	(Get FASTA)	NCBI Sequence Viewer
	XP_063132259	(Get FASTA)	NCBI Sequence Viewer
	XP_063132260	(Get FASTA)	NCBI Sequence Viewer
	XP_063132261	(Get FASTA)	NCBI Sequence Viewer
	XP_063132262	(Get FASTA)	NCBI Sequence Viewer
	XP_063132263	(Get FASTA)	NCBI Sequence Viewer
	XP_063132264	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAC87069	(Get FASTA)	NCBI Sequence Viewer
	EDL86490	(Get FASTA)	NCBI Sequence Viewer
	EDL86491	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024196
GenBank Protein	Q8R2H5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001093982 ⟸ NM_001100512
- Peptide Label:	precursor
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKN LNYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGW VMASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPS GRFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYC NLGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEE DFSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITI SGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKT QPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMH TTLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLS GALHVYSFSSD hide sequence

RefSeq Acc Id:

XP_006253988 ⟸ XM_006253926

- Peptide Label:

isoform X3

- Sequence:

show sequence

MHIRQGRCFLMPFTLASANKENSMKCLRVLTGLHFLMPAFIIFGRTTLCPGRRTQRSWWLSCLE
SPPTWSLMSAGTAWVLNKGSSGQWELYVPIQDLLRIYDNLYGRKVITKNVIVDCTYLQFLEMHG
EMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAFWSTNIYRLTSFMLENGTSDCNLPENPLF
ISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKNLNYTERGVFYSTGSWAPESVTFMYQTLE
RNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGWVMASADLNQDGHGDLVVGAPGYSHPGRF
QIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPSGRFGSALAVLDFNKDGLPDLAVGAPSVG
SGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYCNLGWALLAADADGDGQHDLVISSPFAPG
GGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEEDFSWFGYSLHGVTVANRSLLLIGSPTWK
NISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITISGDKAMGKLGTSLSSGYVRVNGTLTQVL
LVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKTQPALLSTFSGDRRFSRFGSVLHLTDLDD
DGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMHTTLGDVTGKCKSWMTPCPEEKAQYVLIS
PEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLSGALHVYSFSSD

hide sequence

RefSeq Acc Id:	XP_008769853 ⟸ XM_008771631
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKN LNYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGW VMASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPS GRFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYC NLGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEE DFSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITI SGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKT QPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMH TTLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLS GALHVYSFSSD hide sequence

RefSeq Acc Id:	XP_008769857 ⟸ XM_008771635
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSKVQKNDFHRNLTMFISKDIRKNL NYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGWV MASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPSG RFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYCN LGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEED FSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITIS GDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKTQ PALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMHT TLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLSG ALHVYSFSSD hide sequence

RefSeq Acc Id:	XP_017455973 ⟸ XM_017600484
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKN LNYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGW VMASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPS GRFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYC NLGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEE DFSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITI SGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKT QPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMH TTLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLS GALHVYSFSSD hide sequence

RefSeq Acc Id:	XP_017455972 ⟸ XM_017600483
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKN LNYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGW VMASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPS GRFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYC NLGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEE DFSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITI SGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKT QPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMH TTLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLS GALHVYSFSSD hide sequence

RefSeq Acc Id:	XP_017455970 ⟸ XM_017600481
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVGRLWSGLLLLLLFFCSRSSSCGLSTHVEIGHRALQFLQLQDGRINYKELLLEHQDAYQAGT VFPDAFYPSICKQGKFHEVSESTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGVTSHMVA DVSWHSLGIEQGFLRTMGAIDFYDSYSEAHSAGDFGGDVLSQFEFNFNYLSRRWYVPIQDLLRI YDNLYGRKVITKNVIVDCTYLQFLEMHGEMLAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAF WSTNIYRLTSFMLENGTSDCNLPENPLFISCDGRKNHTLSSSKVQKNDFHRNLTMFISKDIRKN LNYTERGVFYSTGSWAPESVTFMYQTLERNLRMMFTGNSQTALKHVSSPSASYTLSVPYARLGW VMASADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIYGNDLGLPPIDLDLDKEAHGVLEGFQPS GRFGSALAVLDFNKDGLPDLAVGAPSVGSGQLTYNGSVYVYYGSQQGRLSSSPNITISCKDTYC NLGWALLAADADGDGQHDLVISSPFAPGGGKQRGIVAAFYSHPRRNDKESLTLDEADWKVNGEE DFSWFGYSLHGVTVANRSLLLIGSPTWKNISRMARSSHQKNQEKKSLGRVYGYFPPNRQREITI SGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAPEKT QPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMH TTLGDVTGKCKSWMTPCPEEKAQYVLISPEASSRFGSSLVSVRSKERNQVVVAAGRSSWGARLS GALHVYSFSSD hide sequence

Ensembl Acc Id:

ENSRNOP00000024196 ⟸ ENSRNOT00000024196

RefSeq Acc Id:	XP_038951442 ⟸ XM_039095514
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951441 ⟸ XM_039095513
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), G3V8B1 (UniProtKB/TrEMBL), A6KLE5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000079067 ⟸ ENSRNOT00000112554

RefSeq Acc Id:	XP_063132258 ⟸ XM_063276188
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), A6KLE5 (UniProtKB/TrEMBL), G3V8B1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132261 ⟸ XM_063276191
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132257 ⟸ XM_063276187
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), A6KLE5 (UniProtKB/TrEMBL), G3V8B1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132263 ⟸ XM_063276193
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132255 ⟸ XM_063276185
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), A6KLE5 (UniProtKB/TrEMBL), G3V8B1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132259 ⟸ XM_063276189
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132262 ⟸ XM_063276192
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132260 ⟸ XM_063276190
- Peptide Label:	isoform X2
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063132256 ⟸ XM_063276186
- Peptide Label:	isoform X1
- UniProtKB:	Q8R2H5 (UniProtKB/Swiss-Prot), A6KLE5 (UniProtKB/TrEMBL), G3V8B1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132264 ⟸ XM_063276194
- Peptide Label:	isoform X4

Protein Domains

Phospholipase C/D

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8R2H5-F1-model_v2	AlphaFold	Q8R2H5	1-843	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700440

Promoter ID:

EPDNEW_R10963

Type:

initiation region

Name:

Gpld1_1

Description:

glycosylphosphatidylinositol specific phospholipase D1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	42,127,700 - 42,127,760	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:631371	AgrOrtholog
BioCyc Gene	G2FUF-9427	BioCyc
Ensembl Genes	ENSRNOG00000017702	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000024196	ENTREZGENE
Gene3D-CATH	2.130.10.130	UniProtKB/Swiss-Prot
InterPro	FG-GAP	UniProtKB/Swiss-Prot
	Gprt_PLipase_D	UniProtKB/Swiss-Prot
	Int_alpha_beta-p	UniProtKB/Swiss-Prot
	Integrin_alpha_N	UniProtKB/Swiss-Prot
	PLPC/GPLD1	UniProtKB/Swiss-Prot
KEGG Report	rno:291132	UniProtKB/Swiss-Prot
NCBI Gene	291132	ENTREZGENE
PANTHER	GLYCOSYLPHOSPHATIDYLINOSITOL PHOSPHOLIPASE D	UniProtKB/Swiss-Prot
	PHOSPHATIDYLINOSITOL-GLYCAN-SPECIFIC PHOSPHOLIPASE D	UniProtKB/Swiss-Prot
Pfam	FG-GAP	UniProtKB/Swiss-Prot
	Zn_dep_PLPC	UniProtKB/Swiss-Prot
PhenoGen	Gpld1	PhenoGen
PRINTS	PHPHLIPASED	UniProtKB/Swiss-Prot
PROSITE	FG_GAP	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017702	RatGTEx
SMART	Int_alpha	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF69318	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZM06_RAT	UniProtKB/TrEMBL
	A6KLE5	ENTREZGENE, UniProtKB/TrEMBL
	G3V8B1	ENTREZGENE, UniProtKB/TrEMBL
	PHLD_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-02-11	Slc1a7	glycosylphosphatidylinositol specific phospholipase D1	Gpld1	glycosylphosphatidylinositol phospholipase D	Name updated to reflect Human and Mouse nomenclature	625702	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_regulation	expression is decreased by insulin in diabetic animals	632912

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Annotations - KEGG (archival)