Camk2g (calcium/calmodulin-dependent protein kinase II gamma) - Rat Genome Database

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Gene: Camk2g (calcium/calmodulin-dependent protein kinase II gamma) Rattus norvegicus
Analyze
Symbol: Camk2g
Name: calcium/calmodulin-dependent protein kinase II gamma
RGD ID: 621802
Description: Enables calcium/calmodulin-dependent protein kinase activity. Involved in several processes, including regulation of postsynaptic membrane neurotransmitter receptor levels; regulation of protein localization to plasma membrane; and response to hypoxia. Is active in glutamatergic synapse and postsynaptic cytosol. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 59. Orthologous to human CAMK2G (calcium/calmodulin dependent protein kinase II gamma); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; N-cadherin signaling pathway; type II interferon signaling pathway; INTERACTS WITH 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ca+2/calmodulin-dependent protein kinase II gamma; calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma; calcium/calmodulin-dependent protein kinase type II gamma chain; calcium/calmodulin-dependent protein kinase type II subunit gamma; calcium/calmodulin-dependent protein kinase type II subunit gamma-like; caM kinase II subunit gamma; caM-kinase II gamma chain; caMK-II subunit gamma; LOC100909586
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,553,238 - 3,612,310 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl153,553,294 - 3,612,310 (+)EnsemblGRCr8
mRatBN7.2153,504,017 - 3,563,050 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,504,085 - 3,563,050 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx153,514,294 - 3,571,376 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,900,774 - 4,957,856 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,513,099 - 3,570,181 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0153,936,721 - 3,995,740 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,936,786 - 3,995,915 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl152,547,616 - 2,550,043 (+)Ensemblrn6Rnor6.0
Rnor_5.0153,669,219 - 3,724,735 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4153,729,433 - 3,786,060 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera151,033,077 - 1,088,815 (-)NCBICelera
RGSC_v3.1153,729,432 - 3,786,060 (+)NCBI
Cytogenetic Map15p16NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (EXP)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
9-cis-retinoic acid  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
amphotericin B  (ISO)
antimony trichloride  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
Azoxymethane  (ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bexarotene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (EXP)
cilnidipine  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
DDE  (EXP)
decabromodiphenyl ether  (EXP)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
diazinon  (EXP)
dibutyl phthalate  (EXP)
dieldrin  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
ferroheme b  (ISO)
folic acid  (ISO)
FR900359  (ISO)
gallic acid  (ISO)
gamma-tocopherol  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
heme b  (ISO)
imidacloprid  (EXP)
iohexol  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
linuron  (EXP)
lipopolysaccharide  (ISO)
melatonin  (EXP)
methotrexate  (ISO)
methylseleninic acid  (ISO)
nickel dichloride  (EXP)
nitrofen  (EXP)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
phenobarbital  (EXP)
pirinixic acid  (ISO)
prochloraz  (EXP)
procymidone  (EXP)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
tetraphene  (ISO)
thiabendazole  (EXP)
titanium dioxide  (ISO)
tocopherol  (ISO)
tributylstannane  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
venlafaxine hydrochloride  (EXP)
vinclozolin  (EXP)
vitamin E  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Calcium/calmodulin-dependent protein kinase IIdelta 2 and gamma isoforms regulate potassium currents of rat brain capillary endothelial cells under hypoxic conditions. Balla Z, etal., J Biol Chem 2002 Jun 14;277(24):21306-14.
2. CaMKII regulation in information processing and storage. Coultrap SJ and Bayer KU, Trends Neurosci. 2012 Oct;35(10):607-18. doi: 10.1016/j.tins.2012.05.003. Epub 2012 Jun 19.
3. Protection of synapses against Alzheimer's-linked toxins: insulin signaling prevents the pathogenic binding of Abeta oligomers. De Felice FG, etal., Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1971-6. doi: 10.1073/pnas.0809158106. Epub 2009 Feb 2.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. A Critical Role for γCaMKII in Decoding NMDA Signaling to Regulate AMPA Receptors in Putative Inhibitory Interneurons. He X, etal., Neurosci Bull. 2022 Aug;38(8):916-926. doi: 10.1007/s12264-022-00840-x. Epub 2022 Mar 15.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Characterization of gene expression profiles associated with glioma progression using oligonucleotide-based microarray analysis and real-time reverse transcription-polymerase chain reaction. van den Boom J, etal., Am J Pathol. 2003 Sep;163(3):1033-43. doi: 10.1016/S0002-9440(10)63463-3.
12. [Molecular mechanisms of the intracellular localizations of Ca2+/calmodulin-dependent protein kinase II isoforms, and their physiological functions] Yamamoto H Tanpakushitsu Kakusan Koso 2002 Mar;47(3):241-7.
13. The role of Ca2+/calmodulin-dependent protein kinase II in mechanisms underlying neuronal hyperexcitability induced by repeated, brief exposure to hypoxia or high K+ in rat hippocampal slices. Yechikhov S, etal., Neurosci Lett 2002 Dec 19;335(1):21-4.
14. New isoforms of Ca2+/calmodulin-dependent protein kinase II in smooth muscle. Zhou ZL and Ikebe M, Biochem J 1994 Apr 15;299 ( Pt 2):489-95.
Additional References at PubMed
PMID:2846534   PMID:9083077   PMID:10625670   PMID:11264466   PMID:12660151   PMID:15569687   PMID:17114649   PMID:19207476   PMID:19292454   PMID:19946888   PMID:20124353   PMID:20131911  
PMID:20433809   PMID:20668654   PMID:22871113   PMID:23283722   PMID:23504235   PMID:25007998   PMID:25303525   PMID:25931508   PMID:27685016   PMID:28423675   PMID:29476059   PMID:30184290  
PMID:30361391   PMID:31518169   PMID:31686426   PMID:32357304   PMID:32553080   PMID:32645222   PMID:37037067  


Genomics

Comparative Map Data
Camk2g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,553,238 - 3,612,310 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl153,553,294 - 3,612,310 (+)EnsemblGRCr8
mRatBN7.2153,504,017 - 3,563,050 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,504,085 - 3,563,050 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx153,514,294 - 3,571,376 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,900,774 - 4,957,856 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,513,099 - 3,570,181 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0153,936,721 - 3,995,740 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,936,786 - 3,995,915 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl152,547,616 - 2,550,043 (+)Ensemblrn6Rnor6.0
Rnor_5.0153,669,219 - 3,724,735 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4153,729,433 - 3,786,060 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera151,033,077 - 1,088,815 (-)NCBICelera
RGSC_v3.1153,729,432 - 3,786,060 (+)NCBI
Cytogenetic Map15p16NCBI
CAMK2G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381073,812,501 - 73,874,555 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1073,812,501 - 73,874,641 (-)Ensemblhg38GRCh38
GRCh371075,572,259 - 75,634,313 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,242,265 - 75,304,349 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1068,855,429 - 68,917,528 (-)NCBICelera
Cytogenetic Map10q22.2NCBI
HuRef1069,567,318 - 69,629,331 (-)NCBIHuRef
CHM1_11075,854,035 - 75,916,102 (-)NCBICHM1_1
T2T-CHM13v2.01074,683,897 - 74,745,947 (-)NCBIT2T-CHM13v2.0
Camk2g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391420,784,943 - 20,844,225 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1420,784,943 - 20,844,156 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381420,734,873 - 20,794,157 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1420,734,875 - 20,794,088 (-)Ensemblmm10GRCm38
MGSCv371421,554,097 - 21,613,310 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361419,523,427 - 19,582,640 (-)NCBIMGSCv36mm8
Celera1417,117,684 - 17,175,721 (-)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1411.53NCBI
Camk2g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543718,036,046 - 18,087,408 (+)Ensembl
ChiLan1.0NW_00495543718,036,614 - 18,089,876 (+)NCBIChiLan1.0ChiLan1.0
CAMK2G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2885,963,413 - 86,025,544 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11085,968,738 - 86,030,866 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01070,335,474 - 70,397,617 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11073,008,103 - 73,068,749 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1073,008,103 - 73,068,737 (-)EnsemblpanPan2panpan1.1
CAMK2G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1424,244,063 - 24,299,362 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl424,245,960 - 24,299,357 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha424,381,620 - 24,436,933 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0424,524,382 - 24,579,684 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl424,526,185 - 24,579,635 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1424,421,519 - 24,476,778 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0424,621,950 - 24,677,415 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0424,977,002 - 25,032,361 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Camk2g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721356,783,885 - 56,833,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365215,276,749 - 5,333,611 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365215,276,629 - 5,325,907 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK2G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1476,535,096 - 76,593,108 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11476,535,095 - 76,632,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21482,661,735 - 82,758,710 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK2G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1957,498,384 - 57,559,724 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl957,498,429 - 57,559,811 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604818,074,467 - 18,136,823 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Camk2g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247547,325,470 - 7,380,876 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247547,325,828 - 7,380,870 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Camk2g
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11290,541,583 - 90,599,894 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Camk2g
124 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:290
Count of miRNA genes:107
Interacting mature miRNAs:112
Transcripts:ENSRNOT00000065644, ENSRNOT00000066163, ENSRNOT00000067162
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15139411584Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15132342855Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15144836456Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
1300142Bp191Blood pressure QTL 1913.14arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)15115177511Rat

Markers in Region
RH144165  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2153,501,672 - 3,501,847 (+)MAPPERmRatBN7.2
Rnor_6.0153,934,366 - 3,934,540NCBIRnor6.0
Rnor_6.0153,689,226 - 3,689,400NCBIRnor6.0
Rnor_5.0153,665,831 - 3,666,005UniSTSRnor5.0
RGSC_v3.4153,725,455 - 3,725,629UniSTSRGSC3.4
Celera151,092,467 - 1,092,641UniSTS
RH 3.4 Map1565.1UniSTS
Cytogenetic Map15p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001437847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001841253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010057797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010057798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010057799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010057800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010057801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J04063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP030854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S71571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U73503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000065644   ⟹   ENSRNOP00000061233
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,554,664 - 3,609,172 (+)Ensembl
mRatBN7.2 Ensembl153,505,401 - 3,559,057 (+)Ensembl
Rnor_6.0 Ensembl153,938,075 - 3,995,915 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000066163   ⟹   ENSRNOP00000062321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,301 - 3,610,544 (+)Ensembl
mRatBN7.2 Ensembl153,504,093 - 3,561,179 (+)Ensembl
Rnor_6.0 Ensembl153,936,786 - 3,993,869 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl152,547,616 - 2,550,043 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107544   ⟹   ENSRNOP00000088587
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,299 - 3,612,310 (+)Ensembl
mRatBN7.2 Ensembl153,504,085 - 3,563,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108734   ⟹   ENSRNOP00000083090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,299 - 3,612,310 (+)Ensembl
mRatBN7.2 Ensembl153,504,085 - 3,563,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110339   ⟹   ENSRNOP00000084344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,322 - 3,610,544 (+)Ensembl
mRatBN7.2 Ensembl153,504,118 - 3,563,050 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114050   ⟹   ENSRNOP00000090198
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,299 - 3,612,310 (+)Ensembl
mRatBN7.2 Ensembl153,504,094 - 3,563,045 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118195   ⟹   ENSRNOP00000085737
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,294 - 3,610,544 (+)Ensembl
mRatBN7.2 Ensembl153,504,118 - 3,563,050 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000120009   ⟹   ENSRNOP00000090296
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,299 - 3,612,310 (+)Ensembl
mRatBN7.2 Ensembl153,504,085 - 3,563,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000120116   ⟹   ENSRNOP00000077055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,553,335 - 3,612,310 (+)Ensembl
mRatBN7.2 Ensembl153,504,085 - 3,563,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000135346   ⟹   ENSRNOP00000111753
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,556,261 - 3,610,544 (+)Ensembl
RefSeq Acc Id: NM_133605   ⟹   NP_598289
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,356 - 3,610,439 (+)NCBI
mRatBN7.2153,504,093 - 3,561,179 (+)NCBI
Rnor_6.0153,936,786 - 3,993,869 (+)NCBI
Rnor_5.0153,669,219 - 3,724,735 (+)NCBI
RGSC_v3.4153,729,433 - 3,786,060 (+)RGD
Celera151,033,077 - 1,088,815 (-)RGD
Sequence:
RefSeq Acc Id: XM_008770486   ⟹   XP_008768708
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,285 - 3,612,310 (+)NCBI
mRatBN7.2153,504,020 - 3,563,050 (+)NCBI
Rnor_6.0153,936,722 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770487   ⟹   XP_008768709
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,284 - 3,612,310 (+)NCBI
mRatBN7.2153,504,019 - 3,563,050 (+)NCBI
Rnor_6.0153,936,721 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770488   ⟹   XP_008768710
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,286 - 3,612,310 (+)NCBI
mRatBN7.2153,504,020 - 3,563,050 (+)NCBI
Rnor_6.0153,936,722 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770489   ⟹   XP_008768711
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,020 - 3,563,050 (+)NCBI
Rnor_6.0153,936,724 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770490   ⟹   XP_008768712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,286 - 3,612,310 (+)NCBI
mRatBN7.2153,504,020 - 3,563,050 (+)NCBI
Rnor_6.0153,936,723 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770491   ⟹   XP_008768713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,021 - 3,563,050 (+)NCBI
Rnor_6.0153,936,724 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770492   ⟹   XP_008768714
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,286 - 3,612,310 (+)NCBI
mRatBN7.2153,504,020 - 3,563,050 (+)NCBI
Rnor_6.0153,936,723 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770493   ⟹   XP_008768715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,287 - 3,612,310 (+)NCBI
mRatBN7.2153,504,021 - 3,563,050 (+)NCBI
Rnor_6.0153,936,724 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770494   ⟹   XP_008768716
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,288 - 3,612,310 (+)NCBI
mRatBN7.2153,504,022 - 3,563,050 (+)NCBI
Rnor_6.0153,936,724 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770495   ⟹   XP_008768717
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,021 - 3,563,050 (+)NCBI
Rnor_6.0153,936,725 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770496   ⟹   XP_008768718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,022 - 3,563,050 (+)NCBI
Rnor_6.0153,936,726 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770497   ⟹   XP_008768719
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,023 - 3,563,050 (+)NCBI
Rnor_6.0153,936,726 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770498   ⟹   XP_008768720
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,288 - 3,612,310 (+)NCBI
mRatBN7.2153,504,022 - 3,563,050 (+)NCBI
Rnor_6.0153,936,725 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770499   ⟹   XP_008768721
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,023 - 3,563,050 (+)NCBI
Rnor_6.0153,936,726 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599575   ⟹   XP_017455064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,265 - 3,612,310 (+)NCBI
mRatBN7.2153,507,028 - 3,563,050 (+)NCBI
Rnor_6.0153,939,318 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599576   ⟹   XP_017455065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
mRatBN7.2153,504,021 - 3,563,050 (+)NCBI
Rnor_6.0153,936,725 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599577   ⟹   XP_017455066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,238 - 3,612,310 (+)NCBI
mRatBN7.2153,504,023 - 3,563,050 (+)NCBI
Rnor_6.0153,936,726 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039092971   ⟹   XP_038948899
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,580,559 - 3,612,310 (+)NCBI
mRatBN7.2153,531,297 - 3,563,050 (+)NCBI
RefSeq Acc Id: XM_039092972   ⟹   XP_038948900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,607,604 (+)NCBI
mRatBN7.2153,504,019 - 3,558,344 (+)NCBI
RefSeq Acc Id: XM_063273932   ⟹   XP_063130002
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273933   ⟹   XP_063130003
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,286 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273934   ⟹   XP_063130004
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,287 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273935   ⟹   XP_063130005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,251 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273936   ⟹   XP_063130006
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273937   ⟹   XP_063130007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,251 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273938   ⟹   XP_063130008
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273939   ⟹   XP_063130009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,249 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273940   ⟹   XP_063130010
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,154 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273941   ⟹   XP_063130011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,251 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273942   ⟹   XP_063130012
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,249 - 3,612,310 (+)NCBI
RefSeq Acc Id: XM_063273943   ⟹   XP_063130013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,580,559 - 3,612,310 (+)NCBI
RefSeq Acc Id: XR_001841253
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,282 - 3,612,310 (+)NCBI
mRatBN7.2153,504,017 - 3,563,050 (+)NCBI
Rnor_6.0153,936,721 - 3,995,740 (+)NCBI
Sequence:
RefSeq Acc Id: XR_010057797
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,282 - 3,612,310 (+)NCBI
RefSeq Acc Id: XR_010057798
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
RefSeq Acc Id: XR_010057799
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,284 - 3,612,310 (+)NCBI
RefSeq Acc Id: XR_010057800
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,553,245 - 3,612,310 (+)NCBI
RefSeq Acc Id: XR_010057801
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,556,251 - 3,612,310 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001424776 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424781 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424782 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424783 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424784 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424785 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424786 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424787 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424788 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424789 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424790 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424791 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424792 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424793 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424794 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424795 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424796 (Get FASTA)   NCBI Sequence Viewer  
  NP_598289 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768708 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768709 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768710 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768711 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768712 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768713 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768714 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768715 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768716 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768717 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768718 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768719 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768720 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768721 (Get FASTA)   NCBI Sequence Viewer  
  XP_017455064 (Get FASTA)   NCBI Sequence Viewer  
  XP_017455065 (Get FASTA)   NCBI Sequence Viewer  
  XP_017455066 (Get FASTA)   NCBI Sequence Viewer  
  XP_038948899 (Get FASTA)   NCBI Sequence Viewer  
  XP_038948900 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130002 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130003 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130004 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130005 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130006 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130007 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130008 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130009 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130010 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130011 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130012 (Get FASTA)   NCBI Sequence Viewer  
  XP_063130013 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA41857 (Get FASTA)   NCBI Sequence Viewer  
  AAB30671 (Get FASTA)   NCBI Sequence Viewer  
  AAC53138 (Get FASTA)   NCBI Sequence Viewer  
  AKJ87842 (Get FASTA)   NCBI Sequence Viewer  
  EDL86250 (Get FASTA)   NCBI Sequence Viewer  
  EDL86251 (Get FASTA)   NCBI Sequence Viewer  
  EDL86252 (Get FASTA)   NCBI Sequence Viewer  
  EDL86253 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000062321
  ENSRNOP00000062321.3
  ENSRNOP00000077055
  ENSRNOP00000088587
  ENSRNOP00000090198
  ENSRNOP00000111753
GenBank Protein P11730 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_598289   ⟸   NM_133605
- UniProtKB: Q64003 (UniProtKB/Swiss-Prot),   Q64004 (UniProtKB/Swiss-Prot),   P11730 (UniProtKB/Swiss-Prot),   A0A8I5ZX06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768709   ⟸   XM_008770487
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768708   ⟸   XM_008770486
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008768712   ⟸   XM_008770490
- Peptide Label: isoform X4
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768710   ⟸   XM_008770488
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008768714   ⟸   XM_008770492
- Peptide Label: isoform X6
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768711   ⟸   XM_008770489
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008768713   ⟸   XM_008770491
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_008768715   ⟸   XM_008770493
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_008768716   ⟸   XM_008770494
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_008768718   ⟸   XM_008770496
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_008768717   ⟸   XM_008770495
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_008768720   ⟸   XM_008770498
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_008768719   ⟸   XM_008770497
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_008768721   ⟸   XM_008770499
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_017455065   ⟸   XM_017599576
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017455066   ⟸   XM_017599577
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_017455064   ⟸   XM_017599575
- Peptide Label: isoform X8
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061233   ⟸   ENSRNOT00000065644
Ensembl Acc Id: ENSRNOP00000062321   ⟸   ENSRNOT00000066163
RefSeq Acc Id: XP_038948900   ⟸   XM_039092972
- Peptide Label: isoform X24
RefSeq Acc Id: XP_038948899   ⟸   XM_039092971
- Peptide Label: isoform X22
Ensembl Acc Id: ENSRNOP00000090198   ⟸   ENSRNOT00000114050
Ensembl Acc Id: ENSRNOP00000077055   ⟸   ENSRNOT00000120116
Ensembl Acc Id: ENSRNOP00000088587   ⟸   ENSRNOT00000107544
Ensembl Acc Id: ENSRNOP00000085737   ⟸   ENSRNOT00000118195
Ensembl Acc Id: ENSRNOP00000090296   ⟸   ENSRNOT00000120009
Ensembl Acc Id: ENSRNOP00000084344   ⟸   ENSRNOT00000110339
Ensembl Acc Id: ENSRNOP00000083090   ⟸   ENSRNOT00000108734
RefSeq Acc Id: XP_063130002   ⟸   XM_063273932
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZV59 (UniProtKB/TrEMBL),   A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130006   ⟸   XM_063273936
- Peptide Label: isoform X14
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130008   ⟸   XM_063273938
- Peptide Label: isoform X18
- UniProtKB: A0A8I5ZX06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130003   ⟸   XM_063273933
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130004   ⟸   XM_063273934
- Peptide Label: isoform X10
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130010   ⟸   XM_063273940
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063130009   ⟸   XM_063273939
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063130012   ⟸   XM_063273942
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063130005   ⟸   XM_063273935
- Peptide Label: isoform X13
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130007   ⟸   XM_063273937
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063130011   ⟸   XM_063273941
- Peptide Label: isoform X20
- UniProtKB: A0A8I6AC70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130013   ⟸   XM_063273943
- Peptide Label: isoform X23
Ensembl Acc Id: ENSRNOP00000111753   ⟸   ENSRNOT00000135346
Protein Domains
Calcium/calmodulin-dependent protein kinase II   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P11730-F1-model_v2 AlphaFold P11730 1-527 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699557
Promoter ID:EPDNEW_R10079
Type:initiation region
Name:Camk2g_1
Description:calcium/calmodulin-dependent protein kinase II gamma
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0153,936,760 - 3,936,820EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621802 AgrOrtholog
BioCyc Gene G2FUF-14562 BioCyc
Ensembl Genes ENSRNOG00000009783 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00000051560 Ensembl
Ensembl Transcript ENSRNOT00000066163 ENTREZGENE
  ENSRNOT00000066163.5 UniProtKB/Swiss-Prot
  ENSRNOT00000107544 ENTREZGENE
  ENSRNOT00000114050 ENTREZGENE
  ENSRNOT00000120116 ENTREZGENE
  ENSRNOT00000135346 ENTREZGENE
Gene3D-CATH 3.10.450.50 UniProtKB/Swiss-Prot
  6.10.140.620 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Ca/CaM-dep_prot_kinase-assoc UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  NTF2-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot
KEGG Report rno:171140 UniProtKB/Swiss-Prot
NCBI Gene 171140 ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE UniProtKB/Swiss-Prot
Pfam CaMKII_AD UniProtKB/Swiss-Prot
  Pkinase UniProtKB/Swiss-Prot
PhenoGen Camk2g PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000009783 RatGTEx
  ENSRNOG00000051560 RatGTEx
SMART S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54427 UniProtKB/Swiss-Prot
  SSF56112 UniProtKB/Swiss-Prot
UniProt A0A0G3FMJ5_RAT UniProtKB/TrEMBL
  A0A8I5Y738 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZV59 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZX06 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZZX0_RAT UniProtKB/TrEMBL
  A0A8I6A5E2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AC70 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AD45 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0M3B6_RAT UniProtKB/TrEMBL
  A6KKQ6_RAT UniProtKB/TrEMBL
  A6KKQ8_RAT UniProtKB/TrEMBL
  A6KKQ9_RAT UniProtKB/TrEMBL
  F1M3F8_RAT UniProtKB/TrEMBL
  KCC2G_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q64003 ENTREZGENE
  Q64004 ENTREZGENE
UniProt Secondary Q64003 UniProtKB/Swiss-Prot
  Q64004 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Camk2g  calcium/calmodulin-dependent protein kinase II gamma  LOC100909586  calcium/calmodulin-dependent protein kinase type II subunit gamma-like  Data merged from RGD:6503131 737654 PROVISIONAL
2012-07-05 LOC100909586  calcium/calmodulin-dependent protein kinase type II subunit gamma-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-11-11 Camk2g  calcium/calmodulin-dependent protein kinase II gamma  Camk2g  calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-23 Camk2g  calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma  Camk2g  calcium/calmodulin-dependent protein kinase II gamma  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-12-14 Camk2g  calcium/calmodulin-dependent protein kinase II gamma    calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma  Name updated 1299863 APPROVED
2002-08-07 Camk2g  calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_process autophosphorylated form decreases inactivation of the voltage-gated outward K+ current in rat brain 724615