Camk2g (calcium/calmodulin dependent protein kinase II gamma) - Rat Genome Database

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Gene: Camk2g (calcium/calmodulin dependent protein kinase II gamma) Chinchilla lanigera
Analyze
Symbol: Camk2g
Name: calcium/calmodulin dependent protein kinase II gamma
RGD ID: 8993330
Description: ENCODES a protein that exhibits calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion transport (ortholog); G1/S transition of mitotic cell cycle (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; N-cadherin signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Autosomal Dominant Intellectual Developmental Disorder 59 (ortholog); genetic disease (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); postsynaptic density (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium/calmodulin-dependent protein kinase II gamma; calcium/calmodulin-dependent protein kinase type II subunit gamma
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543718,036,046 - 18,087,408 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543718,036,614 - 18,089,876 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Camk2g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543718,036,046 - 18,087,408 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543718,036,614 - 18,089,876 (+)NCBIChiLan1.0ChiLan1.0
CAMK2G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381073,812,501 - 73,874,555 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1073,812,501 - 73,874,591 (-)EnsemblGRCh38hg38GRCh38
GRCh371075,572,259 - 75,634,313 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,242,265 - 75,304,349 (-)NCBINCBI36Build 36hg18NCBI36
Celera1068,855,429 - 68,917,528 (-)NCBICelera
Cytogenetic Map10q22.2NCBI
HuRef1069,567,318 - 69,629,331 (-)NCBIHuRef
CHM1_11075,854,035 - 75,916,102 (-)NCBICHM1_1
T2T-CHM13v2.01074,683,897 - 74,745,947 (-)NCBIT2T-CHM13v2.0
Camk2g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391420,784,943 - 20,844,225 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1420,784,943 - 20,844,156 (-)EnsemblGRCm39 Ensembl
GRCm381420,734,873 - 20,794,157 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1420,734,875 - 20,794,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371421,554,097 - 21,613,310 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361419,523,427 - 19,582,640 (-)NCBIMGSCv36mm8
Celera1417,117,684 - 17,175,721 (-)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1411.53NCBI
Camk2g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,553,238 - 3,612,310 (+)NCBIGRCr8
mRatBN7.2153,504,017 - 3,563,050 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,504,085 - 3,563,050 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx153,514,294 - 3,571,376 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,900,774 - 4,957,856 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,513,099 - 3,570,181 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0153,936,721 - 3,995,740 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,936,786 - 3,995,915 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl152,547,616 - 2,550,043 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0153,669,219 - 3,724,735 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4153,729,433 - 3,786,060 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1153,729,432 - 3,786,060 (+)NCBI
Celera151,033,077 - 1,088,815 (-)NCBICelera
Cytogenetic Map15p16NCBI
CAMK2G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2885,963,413 - 86,025,544 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11085,968,738 - 86,030,866 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01070,335,474 - 70,397,617 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11073,008,103 - 73,068,749 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1073,008,103 - 73,068,737 (-)Ensemblpanpan1.1panPan2
CAMK2G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1424,244,063 - 24,299,362 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl424,245,960 - 24,299,357 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha424,381,620 - 24,436,933 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0424,524,382 - 24,579,684 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl424,526,185 - 24,579,635 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1424,421,519 - 24,476,778 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0424,621,950 - 24,677,415 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0424,977,002 - 25,032,361 (-)NCBIUU_Cfam_GSD_1.0
Camk2g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721356,783,885 - 56,833,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365215,276,749 - 5,333,611 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365215,276,629 - 5,325,907 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK2G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1476,535,096 - 76,593,108 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11476,535,095 - 76,632,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21482,661,735 - 82,758,710 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK2G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1957,498,384 - 57,559,724 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl957,498,429 - 57,559,811 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604818,074,467 - 18,136,823 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Camk2g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247547,325,470 - 7,380,876 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247547,325,828 - 7,380,870 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000014175   ⟹   ENSCLAP00000014018
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543718,036,046 - 18,087,408 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000014176   ⟹   ENSCLAP00000014019
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543718,036,615 - 18,087,408 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000014177   ⟹   ENSCLAP00000014020
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543718,036,615 - 18,087,408 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000014178   ⟹   ENSCLAP00000014021
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543718,036,615 - 18,087,408 (+)Ensembl
RefSeq Acc Id: XM_013516755   ⟹   XP_013372209
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543718,036,614 - 18,089,876 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013372209 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000014018.1
  ENSCLAP00000014019
  ENSCLAP00000014019.1
  ENSCLAP00000014020.1
  ENSCLAP00000014021.1
RefSeq Acc Id: XP_013372209   ⟸   XM_013516755
- UniProtKB: A0A8C2VE31 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000014018   ⟸   ENSCLAT00000014175
RefSeq Acc Id: ENSCLAP00000014019   ⟸   ENSCLAT00000014176
RefSeq Acc Id: ENSCLAP00000014020   ⟸   ENSCLAT00000014177
RefSeq Acc Id: ENSCLAP00000014021   ⟸   ENSCLAT00000014178
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009687 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000014175.1 UniProtKB/TrEMBL
  ENSCLAT00000014176 ENTREZGENE
  ENSCLAT00000014176.1 UniProtKB/TrEMBL
  ENSCLAT00000014177.1 UniProtKB/TrEMBL
  ENSCLAT00000014178.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.50 UniProtKB/TrEMBL
  6.10.140.620 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Ca/CaM-dep_prot_kinase-assoc UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  NTF2-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene Camk2g ENTREZGENE
PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II SUBUNIT GAMMA UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE UniProtKB/TrEMBL
Pfam CaMKII_AD UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF54427 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A8C2VE31 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VF97_CHILA UniProtKB/TrEMBL
  A0A8C2VKM0_CHILA UniProtKB/TrEMBL
  A0A8C2YPM3_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Camk2g  calcium/calmodulin dependent protein kinase II gamma    calcium/calmodulin-dependent protein kinase II gamma  Symbol and/or name change 5135510 APPROVED