Rpl32 (ribosomal protein L32) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Rpl32 (ribosomal protein L32) Rattus norvegicus
Analyze
Symbol: Rpl32
Name: ribosomal protein L32
RGD ID: 621203
Description: Predicted to be a structural constituent of ribosome. Involved in cellular response to dexamethasone stimulus and liver regeneration. Part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 60S ribosomal protein L32; large ribosomal subunit protein eL32; MGC72905
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Rpl32-ps3  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,536,650 - 150,540,214 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4150,536,646 - 150,540,214 (-)EnsemblGRCr8
mRatBN7.24148,864,048 - 148,867,612 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3112,494,810 - 112,495,467 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4155,092,786 - 155,096,354 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04150,876,803 - 150,880,371 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,499,705 - 149,503,273 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04147,715,480 - 147,719,044 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)Ensemblrn6Rnor6.0
Rnor_5.04210,999,039 - 211,002,603 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44151,941,599 - 151,945,012 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4137,754,089 - 137,757,653 (-)NCBICelera
RGSC_v3.16145,189,431 - 145,189,896 (-)NCBI
Cytogenetic Map4q42NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dimethoxyphenol  (ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP)
6-propyl-2-thiouracil  (EXP)
amino acid  (ISO)
amiodarone  (EXP)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzbromarone  (EXP)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chloropicrin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (EXP)
cocaine  (EXP)
copper(II) chloride  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
disodium selenite  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenpyroximate  (ISO)
fipronil  (EXP)
folic acid  (ISO)
furfural  (ISO)
gallic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (EXP,ISO)
inulin  (ISO)
ivermectin  (ISO)
L-ethionine  (EXP)
Mesaconitine  (EXP)
methylisothiazolinone  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
omeprazole  (EXP)
paracetamol  (ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (EXP)
propiconazole  (ISO)
pyrimidifen  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sirolimus  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sunitinib  (ISO)
thapsigargin  (EXP)
thioacetamide  (EXP)
thiram  (ISO)
torin 1  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
tungsten  (ISO)
urethane  (ISO)
ursodeoxycholic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structures of the human and Drosophila 80S ribosome. Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2. Coordinate regulation of ribosomal protein mRNA level in regenerating rat liver. Study with the corresponding mouse cloned cDNAs. Faliks D and Meyuhas O, Nucleic Acids Res. 1982 Feb 11;10(3):789-801.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. The primary structure of rat ribosomal protein L32. Rajchel A, etal., Nucleic Acids Res 1988 Mar 25;16(5):2347.
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Dexamethasone stimulates ribosomal protein L32 gene transcription in rat myoblasts. Sienna N, etal., Mol Cell Endocrinol. 2000 Sep 25;167(1-2):127-37.
12. Isolation of eukaryotic ribosomal proteins. Purification and characterization of 60 S ribosomal subunit proteins L3, L6, L7', L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32, L34, L35, L36, L36', and L37'. Tsurugi K, etal., J Biol Chem. 1977 Jun 10;252(11):3961-9.
Additional References at PubMed
PMID:6993285   PMID:12477932   PMID:12962325   PMID:15489334   PMID:16854843   PMID:19946888   PMID:22658674   PMID:24930395   PMID:25957688  


Genomics

Comparative Map Data
Rpl32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,536,650 - 150,540,214 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4150,536,646 - 150,540,214 (-)EnsemblGRCr8
mRatBN7.24148,864,048 - 148,867,612 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3112,494,810 - 112,495,467 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4155,092,786 - 155,096,354 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04150,876,803 - 150,880,371 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,499,705 - 149,503,273 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04147,715,480 - 147,719,044 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)Ensemblrn6Rnor6.0
Rnor_5.04210,999,039 - 211,002,603 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44151,941,599 - 151,945,012 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4137,754,089 - 137,757,653 (-)NCBICelera
RGSC_v3.16145,189,431 - 145,189,896 (-)NCBI
Cytogenetic Map4q42NCBI
RPL32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38312,834,485 - 12,841,582 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl312,834,485 - 12,841,582 (-)Ensemblhg38GRCh38
GRCh37312,875,984 - 12,883,081 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36312,851,444 - 12,858,081 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34312,851,444 - 12,856,949NCBI
Celera312,814,735 - 12,821,372 (-)NCBICelera
Cytogenetic Map3p25.2NCBI
HuRef312,810,357 - 12,816,994 (-)NCBIHuRef
CHM1_1312,826,437 - 12,833,074 (-)NCBICHM1_1
T2T-CHM13v2.0312,835,994 - 12,843,091 (-)NCBIT2T-CHM13v2.0
Rpl32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396115,782,475 - 115,785,704 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6115,782,466 - 115,785,708 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm386115,805,514 - 115,808,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6115,805,505 - 115,808,747 (-)Ensemblmm10GRCm38
MGSCv376115,755,532 - 115,758,761 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366115,771,133 - 115,774,362 (-)NCBIMGSCv36mm8
Celera6117,645,158 - 117,648,387 (-)NCBICelera
Cytogenetic Map6E3NCBI
cM Map653.72NCBI
Rpl32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542917,885,314 - 17,890,536 (+)Ensembl
ChiLan1.0NW_00495542917,886,048 - 17,890,536 (+)NCBIChiLan1.0ChiLan1.0
RPL32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2212,818,519 - 12,824,279 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1312,823,281 - 12,829,041 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0312,759,205 - 12,764,800 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1313,103,471 - 13,109,043 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl313,103,471 - 13,109,044 (-)EnsemblpanPan2panpan1.1
Rpl32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494217,923,205 - 17,927,086 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936602982,092 - 986,567 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936602982,633 - 986,458 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1368,786,856 - 68,793,204 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11368,788,109 - 68,793,265 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21376,057,726 - 76,061,577 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPL32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12248,811,342 - 48,816,905 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2248,811,401 - 48,816,882 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041117,672,080 - 117,677,680 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624872430,302 - 435,365 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624872430,677 - 435,145 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Rpl32
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1630,903,932 - 30,907,554 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rpl32
35 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:88
Interacting mature miRNAs:93
Transcripts:ENSRNOT00000014493, ENSRNOT00000046799
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4107346299152346299Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4134095016179095016Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4149763204169799698Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4150095743159267220Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4117737142152833657Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
1358364Sradr4Stress Responsive Adrenal Weight QTL 44.92adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)4131384565176384565Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4112427331157427331Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4112427331157427331Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4123870974168870974Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4117559384162559384Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4111383604156383604Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)494638356168870820Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4106848959168870974Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4108206096153206096Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4127263297172263297Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4126334185171334185Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4111383604156383604Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482944895154403548Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4124700988169700988Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264174095838Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)4100752691179366077Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)445429709157555683Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)486709649168870974Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4134199006168870974Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4148121375176967367Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)465495851159259805Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4116184844161184844Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)457613339151163960Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4148834094168870974Rat

Markers in Region
RH135298  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr84150,536,272 - 150,536,469 (+)Marker Load Pipeline
mRatBN7.24148,863,670 - 148,863,867 (+)MAPPERmRatBN7.2
Rnor_6.04147,715,103 - 147,715,299NCBIRnor6.0
Rnor_5.04210,998,662 - 210,998,858UniSTSRnor5.0
Celera4137,753,712 - 137,753,908UniSTS
RH 3.4 Map4951.41UniSTS
Cytogenetic Map4q42UniSTS
AI012088  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr84150,540,610 - 150,540,915 (+)Marker Load Pipeline
mRatBN7.24148,868,008 - 148,868,313 (+)MAPPERmRatBN7.2
Rnor_6.04147,719,441 - 147,719,745NCBIRnor6.0
Rnor_5.04211,003,000 - 211,003,304UniSTSRnor5.0
RGSC_v3.44151,945,409 - 151,945,713UniSTSRGSC3.4
Celera4137,758,050 - 137,758,354UniSTS
RH 3.4 Map4966.9UniSTS
Cytogenetic Map4q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
25 22 104 247 132 135 81 105 81 12 484 257 11 214 106 138 54 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_013226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC061562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X06483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000014493   ⟹   ENSRNOP00000014493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4150,536,646 - 150,540,214 (-)Ensembl
mRatBN7.2 Ensembl4148,864,044 - 148,867,612 (-)Ensembl
Rnor_6.0 Ensembl4147,715,473 - 147,719,072 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000046799   ⟹   ENSRNOP00000041638
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3112,494,810 - 112,495,467 (+)Ensembl
Rnor_6.0 Ensembl6145,777,318 - 145,777,767 (-)Ensembl
RefSeq Acc Id: NM_013226   ⟹   NP_037358
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84150,536,650 - 150,540,214 (-)NCBI
mRatBN7.24148,864,048 - 148,867,612 (-)NCBI
Rnor_6.04147,715,480 - 147,719,044 (-)NCBI
Rnor_5.04210,999,039 - 211,002,603 (-)NCBI
RGSC_v3.44151,941,599 - 151,945,012 (-)RGD
Celera4137,754,089 - 137,757,653 (-)RGD
Sequence:
RefSeq Acc Id: XM_063285653   ⟹   XP_063141723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84150,536,650 - 150,540,180 (-)NCBI
RefSeq Acc Id: NP_037358   ⟸   NM_013226
- UniProtKB: Q63ZV8 (UniProtKB/Swiss-Prot),   P62912 (UniProtKB/Swiss-Prot),   A6IKZ7 (UniProtKB/TrEMBL),   A0A8L2ULN5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000014493   ⟸   ENSRNOT00000014493
Ensembl Acc Id: ENSRNOP00000041638   ⟸   ENSRNOT00000046799
RefSeq Acc Id: XP_063141723   ⟸   XM_063285653
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62912-F1-model_v2 AlphaFold P62912 1-135 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693326
Promoter ID:EPDNEW_R3851
Type:multiple initiation site
Name:Rpl32_1
Description:ribosomal protein L32
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04147,719,044 - 147,719,104EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621203 AgrOrtholog
BioCyc Gene G2FUF-43313 BioCyc
Ensembl Genes ENSRNOG00000010746 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00000032605 Ensembl
Ensembl Transcript ENSRNOT00000014493 ENTREZGENE
  ENSRNOT00000014493.6 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:6921029 IMAGE-MGC_LOAD
  IMAGE:7301263 IMAGE-MGC_LOAD
InterPro Ribosomal_L32e UniProtKB/Swiss-Prot
  Ribosomal_L32e_CS UniProtKB/Swiss-Prot
  Ribosomal_L32e_sf UniProtKB/Swiss-Prot
KEGG Report rno:28298 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105483 IMAGE-MGC_LOAD
  MGC:72905 IMAGE-MGC_LOAD
NCBI Gene 28298 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L32 UniProtKB/Swiss-Prot
  PTHR23413 UniProtKB/Swiss-Prot
Pfam Ribosomal_L32e UniProtKB/Swiss-Prot
PhenoGen Rpl32 PhenoGen
PROSITE RIBOSOMAL_L32E UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000010746 RatGTEx
  ENSRNOG00000032605 RatGTEx
SMART Ribosomal_L32e UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52042 UniProtKB/Swiss-Prot
UniProt A0A8L2ULN5 ENTREZGENE
  A6IKZ7 ENTREZGENE, UniProtKB/TrEMBL
  P62912 ENTREZGENE
  Q63ZV8 ENTREZGENE
  RL32_RAT UniProtKB/Swiss-Prot
UniProt Secondary P02433 UniProtKB/Swiss-Prot
  Q63ZV8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Rpl32  ribosomal protein L32      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Rpl32  ribosomal protein L32      Symbol and Name status set to provisional 70820 PROVISIONAL