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Gene: Scn2b (sodium voltage-gated channel beta subunit 2) Rattus norvegicus

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Symbol:

Scn2b

Name:

sodium voltage-gated channel beta subunit 2

RGD ID:

3633

Description:

Enables sodium channel regulator activity and voltage-gated sodium channel activity. Involved in nervous system development and response to pyrethroid. Located in plasma membrane. Is active in axon initial segment and node of Ranvier. Biomarker of otitis media. Human ortholog(s) of this gene implicated in familial atrial fibrillation. Orthologous to human SCN2B (sodium voltage-gated channel beta subunit 2); INTERACTS WITH (+)-trans-(S)-allethrin; 1-naphthyl isothiocyanate; 3H-1,2-dithiole-3-thione.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

SCNB2; Sodium channel beta 2; sodium channel regulatory subunit beta-2; sodium channel subunit beta-2; sodium channel, voltage-gated, type II, beta; sodium channel, voltage-gated, type II, beta polypeptide; sodium channel, voltage-gated, type II, beta subunit

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	54,322,383 - 54,334,519 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	54,322,383 - 54,334,519 (+)	Ensembl				GRCr8
mRatBN7.2	8	45,425,629 - 45,437,765 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	45,425,629 - 45,437,765 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	50,921,042 - 50,933,209 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	49,199,783 - 49,211,951 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	47,070,360 - 47,082,527 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	49,419,003 - 49,431,110 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	49,418,965 - 49,427,689 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	48,045,397 - 48,057,559 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	48,068,843 - 48,078,632 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	45,010,175 - 45,018,724 (+)	NCBI		Celera
RGSC_v3.1	8	48,077,608 - 48,087,398 (+)	NCBI
Cytogenetic Map	8	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

dilated cardiomyopathy (ISO)

Experimental Seizures (IDA)

Familial Atrial Fibrillation 14 (ISO)

otitis media (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-pilocarpine (ISO)

(+)-trans-(S)-allethrin (EXP)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

3H-1,2-dithiole-3-thione (EXP)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

antirheumatic drug (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cisplatin (ISO)

cocaine (EXP)

daunorubicin (ISO)

decabromodiphenyl ether (EXP)

dichlorine (EXP)

disodium selenite (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

ethanol (ISO)

fenvalerate (EXP)

fipronil (EXP)

mitoxantrone (ISO)

okadaic acid (ISO)

ozone (EXP)

panobinostat (ISO)

paraquat (EXP)

perfluorooctanoic acid (EXP)

pirinixic acid (EXP)

resveratrol (ISO)

sarin (EXP)

SB 431542 (ISO)

sevoflurane (EXP)

sodium arsenite (ISO)

sodium atom (EXP,ISO)

sunitinib (ISO)

tetrodotoxin (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

uranium atom (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cardiac conduction (IBA,ISO)

cardiac muscle cell action potential involved in contraction (IBA,IEA,ISO)

cardiac muscle contraction (IEA,ISO)

gene expression (ISO)

membrane depolarization during action potential (IEA,ISO)

membrane depolarization during cardiac muscle cell action potential (IBA,IEA,ISO)

membrane repolarization during ventricular cardiac muscle cell action potential (IEA)

monoatomic ion transport (IEA)

nervous system development (IEP)

positive regulation of sodium ion transport (IEA,ISO)

regulation of atrial cardiac muscle cell membrane depolarization (IEA,ISO)

regulation of heart rate by cardiac conduction (IEA,ISO)

response to heat (ISO)

response to pyrethroid (IDA)

sodium ion transmembrane transport (IEA)

sodium ion transport (IEA,ISO)

Cellular Component

axon (IEA)

axon initial segment (IDA)

membrane (IEA)

node of Ranvier (IDA)

plasma membrane (IBA,IDA,IEA,ISO)

T-tubule (IEA,ISO)

voltage-gated sodium channel complex (IBA,IEA,ISO,ISS,TAS)

Molecular Function

protein binding (IPI)

sodium channel regulator activity (IBA,IDA,IEA,ISO)

voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (IEA,ISO)

voltage-gated sodium channel activity (IDA)

voltage-gated sodium channel activity involved in cardiac muscle cell action potential (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of the cysteine residue responsible for disulfide linkage of Na+ channel α and β2 subunits.	Chen C, etal., J Biol Chem. 2012 Nov 9;287(46):39061-9. doi: 10.1074/jbc.M112.397646. Epub 2012 Sep 19.
2.	Characterization of sodium channel alpha- and beta-subunits in rat and mouse cardiac myocytes.	Dhar Malhotra J, etal., Circulation. 2001 Mar 6;103(9):1303-10.
3.	mRNA coding for voltage-gated sodium channel beta2 subunit in rat central nervous system: cellular distribution and changes following kainate-induced seizures.	Gastaldi M, etal., Neurosci Lett. 1998 Jun 12;249(1):53-6.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
6.	Structure and function of the beta 2 subunit of brain sodium channels, a transmembrane glycoprotein with a CAM motif.	Isom LL, etal., Cell 1995 Nov 3;83(3):433-42.
7.	Suppression of epithelial ion transport transcripts during pneumococcal acute otitis media in the rat.	Li HS, etal., Acta Otolaryngol. 2002 Jul;122(5):488-94.
8.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Human and rat Nav1.3 voltage-gated sodium channels differ in inactivation properties and sensitivity to the pyrethroid insecticide tefluthrin.	Tan J and Soderlund DM, Neurotoxicology. 2009 Jan;30(1):81-9. Epub 2008 Nov 5.
14.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
15.	Differential expression of neuronal voltage-gated sodium channel mRNAs during the development of the rat trigeminal ganglion.	Thun J, etal., Brain Res. 2009 May 7;1269:11-22. Epub 2009 Mar 6.

Additional References at PubMed

PMID:9861042	PMID:10769382	PMID:15178439	PMID:15200951	PMID:16306410	PMID:19808477	PMID:22871113	PMID:26259688	PMID:26852328	PMID:28871036

Genomics

Comparative Map Data

Scn2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	54,322,383 - 54,334,519 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	54,322,383 - 54,334,519 (+)	Ensembl				GRCr8
mRatBN7.2	8	45,425,629 - 45,437,765 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	45,425,629 - 45,437,765 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	50,921,042 - 50,933,209 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	49,199,783 - 49,211,951 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	47,070,360 - 47,082,527 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	49,419,003 - 49,431,110 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	49,418,965 - 49,427,689 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	48,045,397 - 48,057,559 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	48,068,843 - 48,078,632 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	45,010,175 - 45,018,724 (+)	NCBI		Celera
RGSC_v3.1	8	48,077,608 - 48,087,398 (+)	NCBI
Cytogenetic Map	8	q22	NCBI

SCN2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	118,162,806 - 118,176,639 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	118,162,806 - 118,176,639 (-)	Ensembl			hg38	GRCh38
GRCh37	11	118,033,521 - 118,047,354 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	117,538,729 - 117,552,546 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	117,538,728 - 117,552,546	NCBI
Celera	11	115,191,374 - 115,205,190 (-)	NCBI		Celera
Cytogenetic Map	11	q23.3	NCBI
HuRef	11	113,967,183 - 113,980,997 (-)	NCBI		HuRef
CHM1_1	11	117,919,350 - 117,933,166 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	118,179,198 - 118,193,026 (-)	NCBI		T2T-CHM13v2.0

Scn2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	45,029,174 - 45,041,368 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	45,029,080 - 45,041,368 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	45,117,876 - 45,130,070 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	45,117,782 - 45,130,070 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	44,925,959 - 44,938,153 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	44,868,876 - 44,881,065 (+)	NCBI		MGSCv36	mm8
Celera	9	42,393,438 - 42,405,653 (+)	NCBI		Celera
Cytogenetic Map	9	A5.2	NCBI
cM Map	9	24.84	NCBI

Scn2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	19,340,947 - 19,354,062 (-)	Ensembl
ChiLan1.0	NW_004955412	19,341,008 - 19,353,563 (-)	NCBI	ChiLan1.0	ChiLan1.0

SCN2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	118,863,121 - 118,876,923 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	119,968,076 - 119,981,881 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	112,996,609 - 113,010,412 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	116,928,676 - 116,942,506 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	116,928,676 - 116,942,500 (-)	Ensembl			panPan2	panpan1.1

SCN2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	15,514,760 - 15,534,179 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	15,521,481 - 15,534,179 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	15,572,346 - 15,585,043 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	15,463,692 - 15,476,337 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	15,456,869 - 15,476,337 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	15,601,775 - 15,614,477 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	15,505,329 - 15,518,028 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	15,546,638 - 15,559,352 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Scn2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	100,340,752 - 100,353,142 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	3,261,533 - 3,274,623 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	3,262,161 - 3,274,545 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SCN2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	45,484,998 - 45,498,465 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	45,484,994 - 45,502,578 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	50,526,026 - 50,543,574 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SCN2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	109,538,694 - 109,552,745 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	109,538,652 - 109,552,740 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	16,476,980 - 16,490,889 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Scn2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	13,580,313 - 13,593,169 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624784	13,580,427 - 13,593,055 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Scn2b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	39,651,877 - 39,664,058 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Scn2b
91 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	38
Count of miRNA genes:	37
Interacting mature miRNAs:	37
Transcripts:	ENSRNOT00000021819
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
5684993	Bmd84	Bone mineral density QTL 84	4.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	8	51589699	58991895	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
2302278	Gluco36	Glucose level QTL 36	4.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	8	37760859	58991895	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
724514	Uae15	Urinary albumin excretion QTL 15	2.9		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	37760859	61459705	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
737824	Hcar10	Hepatocarcinoma resistance QTL 10	2.9		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	8	49610204	68373388	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1359021	Bp271	Blood pressure QTL 271	1.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	34125902	55607752	Rat
631216	Stl9	Serum triglyceride level QTL 9	4.71	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	8	50763951	67219641	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat

Markers in Region

BE119812

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	45,433,484 - 45,433,662 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	49,426,830 - 49,427,007	NCBI	Rnor6.0
Rnor_5.0	8	48,053,279 - 48,053,456	UniSTS	Rnor5.0
RGSC_v3.4	8	48,077,912 - 48,078,089	UniSTS	RGSC3.4
Celera	8	45,018,004 - 45,018,181	UniSTS
RH 3.4 Map	8	453.6	UniSTS
Cytogenetic Map	8	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
15	12	67	163	69	68	37	39	37	6	264	139	11	141	65	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_012877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U37026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U37147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021819 ⟹ ENSRNOP00000021819

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	8	49,418,965 - 49,427,689 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106113 ⟹ ENSRNOP00000078627

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	54,322,383 - 54,334,519 (+)	Ensembl
mRatBN7.2 Ensembl	8	45,425,629 - 45,437,765 (+)	Ensembl

RefSeq Acc Id:

NM_012877 ⟹ NP_037009

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	54,322,383 - 54,334,519 (+)	NCBI
mRatBN7.2	8	45,425,629 - 45,437,765 (+)	NCBI
Rnor_6.0	8	49,419,003 - 49,427,550 (+)	NCBI
Rnor_5.0	8	48,045,397 - 48,057,559 (+)	NCBI
RGSC_v3.4	8	48,068,843 - 48,078,632 (+)	RGD
Celera	8	45,010,175 - 45,018,724 (+)	RGD

Sequence:

show sequence

CTTAAGAAGAAGATGGAAATAAAAGCTTCCTTAATGTTGCAATATGTCTTTTGAAGTACATCCC
TGCATTTTCTTTTTTAGCATCTAACCATTCCTCCCTTGTGGTCCTTGGTCCCTCAATCACCCTT
TCCCACAGCCCACCCGCCTAACATCACAGTCTCTGAAAATGCACAGGGATGCCTGGCTACCTCG
CCCTGCCTTCAGCCTCACGGGGCTCAGTCTGTTTTTCTCTTTGGTGCCCTCGGGGCGGAGCATG
GAAGTCACAGTCCCCACCACTCTTAGTGTCCTCAACGGGTCTGATACCCGCCTGCCCTGTACCT
TCAACTCCTGCTATACCGTGAACCACAAGCAGTTCTCTCTGAACTGGACTTACCAGGAGTGTAG
CAATTGCTCAGAGGAGATGTTCCTCCAGTTCCGAATGAAGATCATCAACCTGAAGCTGGAGCGG
TTTGGAGACCGCGTAGAGTTCTCGGGGAACCCCAGTAAGTACGACGTGTCAGTGACTCTAAAGA
ACGTGCAGCTAGAAGACGAAGGCATTTACAACTGCTACATCACCAACCCTCCAGACCGCCACCG
TGGCCATGGCAAGATCTACCTGCAGGTCCTTCTAGAAGTGCCCCCAGAGCGGGACTCCACGGTG
GCAGTCATCGTGGGTGCCTCAGTGGGGGGTTTCCTGGCTGTGGTCATCTTGGTGCTGATGGTGG
TCAAATGTGTGAGGAGGAAAAAAGAGCAGAAGCTGAGCACGGATGACCTGAAGACCGAAGAGGA
AGGCAAGACGGATGGCGAGGGCAACGCGGAAGATGGCGCCAAGTAACCGGAAGCTTGCCCTGAA
GCCCCTTCCTGTGTCCTGTCTCCTCTCACTCTCTGCCCTGT

hide sequence

RefSeq Acc Id:

XM_006242895 ⟹ XP_006242957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	54,322,705 - 54,334,519 (+)	NCBI
mRatBN7.2	8	45,425,956 - 45,437,765 (+)	NCBI
Rnor_6.0	8	49,419,249 - 49,431,110 (+)	NCBI
Rnor_5.0	8	48,045,397 - 48,057,559 (+)	NCBI

Sequence:

show sequence

GCTCCTAAGGGTCAGAAGTGCAGCAGCAGCTGAAAGAGGAGGGGGCAGGGGGCAGGAGGGAAGG
AGGAGTGTGAGCGCTTCCCTCCGTGTCCTTGGGAAGGGGCGTGCTGGGGACCTGGGACAGCTGG
GACTGCCGGATGCTGGGCTTCTTGGTCACAGAAATGTTGACATGGGGTGCCCTCGGGGCGGAGC
ATGGAAGTCACAGTCCCCACCACTCTTAGTGTCCTCAACGGGTCTGATACCCGCCTGCCCTGTA
CCTTCAACTCCTGCTATACCGTGAACCACAAGCAGTTCTCTCTGAACTGGACTTACCAGGAGTG
TAGCAATTGCTCAGAGGAGATGTTCCTCCAGTTCCGAATGAAGATCATCAACCTGAAGCTGGAG
CGGTTTGGAGACCGCGTAGAGTTCTCGGGGAACCCCAGTAAGTACGACGTGTCAGTGACTCTAA
AGAACGTGCAGCTAGAAGACGAAGGCATTTACAACTGCTACATCACCAACCCTCCAGACCGCCA
CCGTGGCCATGGCAAGATCTACCTGCAGGTCCTTCTAGAAGTGCCCCCAGAGCGGGACTCCACG
GTGGCAGTCATCGTGGGTGCCTCAGTGGGGGGTTTCCTGGCTGTGGTCATCTTGGTGCTGATGG
TGGTCAAATGTGTGAGGAGGAAAAAAGAGCAGAAGCTGAGCACGGATGACCTGAAGACCGAAGA
GGAAGGCAAGACGGATGGCGAGGGCAACGCGGAAGATGGCGCCAAGTAACCGGAAGCTTGCCCT
GAAGCCCCTTCCTGTGTCCTGTCTCCTCTCACTCTCTGCCCTGTACAGTGTGACCCTGCCTGCT
CTCACTTGGTGTGCTTCTCTTGAATAGGACCCCAGGATCGACCTGGGGCCTCCCTTCCAATGCC
CCCACTCCCATACCAAGGACGACCTCCCTCCCCTTCATCTGAAAACTGCCTTGGTATCTGAGAT
ACGCGCGAGTCCCAGGGAGAACAGAGAGGGCTCTAGCCTGTCAGTCTTTGAGGAAGAAAGACCT
GTGTGGTCCCAAAGACAGGATTGGGGAAGGAGGGCAGTGGGAGAAGAGGCCGTCTGCCCGTCTT
GTCTAGGGTTTGGTCTTGTGGTGATTTAAACCGTGGGAATGGCAGTGTGTGTGGTGGGGGATTC
TGTGCTGATCAGAGGCACCATGGGAATGACTCGTGATGATAATGGCTTTGCTGTATTCCTCTGG
CTACTCCTAGCCAGGAACAGCCATCAGCTGGGGATGAAGGTGGGGTCCTACCATTTGTGAAAGT
ATTATTTAAAGGGATGACTGTGCATTTCCAGGGCACTCAAGAAAAGATAGGGCTGAGGCATTTC
TGGGCAGAGCCTTGGCCCAGAGAACTCTGTTCTGGCCTCATTTCTATCACTAGCCACTCCCAGA
GAGGCCCTGGTTTACTGTTGGCTACTGCTCCCTTGGGGATGCTGGCAAGAGCGCTACTGGAAAA
GCGGCATCAGGTAAGATCATATGCTACCCTAGGGATGCTCCTTAAGAGACCTGTGAGGGCCTGA
GGGGTACGGGCTTCACTGCGTACATGTGGCTGCCTTCTCCAACAAGATGATTACCTTGGTTTCA
GCCAGCAGCTGCCAAACCTCAGAATGGGGGTGTGTTTTGTGTGTGTGTGTGTGTATGGGCAACT
TCCTGCAGGGCTTTAGTTTGGGGGTTTCTGGCTGCCCTTGGCAGGGGTTCTGTCTGGCTTTTGG
CAAGAAGGAAGAGAAGGCTGGAGAGCATGTAATATGAGAGCATTCTGGAGGAGCCTGTGAGCTC
TGCCCCTCCCCCACCCCCAGAGCTCCCTTTATAGGGGAGAAAGTCGCTCCTGTGGGAAAACAAC
TTTCACTGCCATTTTACTATCATTATAAGGGACTTGTTAAGTCCAGAAATGGGAGAAAGGCAGG
GCAGAAATGGCTAATCGGAGAGCACCGTGTTAGGACATGCTCAGAGAACTGGCACAGAGCCTCC
TGCAGACTGAAGTTCCAAGTGACCGACAGAAGCTAAAAGTATTGCCCATGTTCTGGCTCCCTGG
TCCCTGGTTAGAACAAACAGAGCTTCCTGGTGGGAGAACCTTGAGCCTAGGAGGTGTTTGTACA
TGGTAGTGGTGGGGTCCGTCTAGCCCTGCTCCCCTTCCCAGAAACTCAGCCCCCACAAGCTCAG
GGTAAGTAAGCTGTTCAGGGTAGGGAAAGAGTGTGGTAGAGACAAGACCAAGACAGTCTCAGGG
ACCAATACTTGCCTCTGCTTATCAGATAGCCACTCGAAGAGACAATGACAGCAGATGGAAGGTT
CAGCTTAATTCATTTCAACCCAACAACCATTTACCGAGTTTATGCTGTATTCCAGGCACTGTGC
TGGGTGCCAGGGGTGCATACAAAGCCATAACAGAGTCAGGGACTGCCAAATCTGCACTGTAGGA
CCAAGAGTAGATTTTTCTTCCTTCCTTTCTTTCTTTTTCTTTTCTTTTCTTTCTTTCTTTCCTT
TTTTTTTTTGATGCATCTACTTCCGCCTCCATAGCCACTGCTTCCACAAGAGGTCAGGAGGATG
AGACTTTTGATTTGGGGGTTTGGGAAAATAAGGCTGCAAGGGGAGGGGGGAAGGTACTGTTGGA
GAGGGTACAGAGGTCATGTAGGTTGGGCATGGAGTAGGGGATGGGTAAGCAGCCAGAGGACTCC
TGGGTAAGGTGAATCTAACCCTTCTGGAAGTTCTAACTCTTTGGCTCAGAACCTAACTGCCAGA
GAACACACTGCCAATGGGAGTGGGCGAAACCACCAGGGTGCCTGGAGCAGGTGGATACTGCCTA
TCCTTCCAGCAAGCCCACTAGGGGTAGAGAGATGGGTCATGGGCTCCTCAAGCCAGCTGAAGCC
AAGGGTGGTGGTGTTTGGTAGCTTGGAGCAGCCAGTTTTCATTACCTGGCACGTGCCGTCTTCT
TTCACGGTGCACAGACAAGGGACTTGGCTTTTGCAAAGTCTCCTAACATTTTGGGGGGAGTGGT
TACTTGGGCGATTCCCCCAGAGGGTTGTACTAATAAGTGGCCTCTTAAAGAGGTAAAGTTTCTA
GGGGTCTCTTTCTTTTCTGTCCTGACGGAATGGGGTCCAGGGAAAGCAACGCCTGTCTCTGGAT
CTCATGGGCTGGGTCAGGGGCCATTTTGCCCCAGGTACTTGCCCCCATGCGCACTTTCTTAAAC
CCTACGTGAGGGCCTCTGGGCTTGAGGTTGGGAACAAAACCAGGCTTCTGTGAGGTGGGGTGGG
AAACTGTGAGATGTAACTACAGGAGCCGTTGCTCAAGCTTGCTTCTTAGCTTACGCCAGCGAAC
TGCTCTCTTGCTGCAGTGTGGGCTCCGAGCTCTGCTCTTGGCTATGTGCTCCCACCGCTGTGCT
CCCCGTCTCTCCTGCCTCTCCTGCTCTCCCAGATCCCCCTCCTCAGGTCCTATCTGCCTCTGCC
TCCTAATTAAGGGCCACTGCAAAGAAAGATTGGCAGGCTAACCCGAGGGGTTCAGCTCAGGAGA
ACAAAGCACAATATTTCAGGACTGAAAATGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAGAGA
GTTGTCTGCCCCTCCAGCTATGGGCTCGTCAGCTAGTCCCGCTTTATCAAATGGAAAAGCTGAT
TGGGTCCGTGGTTGCCTGTGAGTCTCCTTGGGAAAGTTGGGCTGCTACCTACCTATAAGATCAG
GTTAAGCAGGTAGGCAGGTAGAAATACCGACCAGGTCCAAAGATGTTAGTCCCAGGCCATAGGA
ATGGCTTGGTGCAGTTGGAACGGGTGACAAATTAAGAAAACTTTTTTTTTTCCTACATATGTCT
TAAGAATAGACAGCCTTGCTGTGCCTCTTGCTGATGTCTTCCTTTATTGAAGCTTGCTGATGCG
ACTGTACATAGCCTTTCTATATAGGTAGAGATATATTATACATACATATAAAACATCTCACTGG
GGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCACAAGGCCCTGGGTTCGGTCC
CCAGCTCCGACAAAAAGAACAACAACAACAAAAAAATCTCACTATGCCCACCCCAAAAGTTACA
CTGTGGGGGGAGGGTGTAATCACTTCTCAGTGTTTCCGAGTACCAAAGGTTCCTTAGGCAACGT
TCTGTATGGTTTTTCAGGGGGAGAACCCAGCTGCATAGCAAGGGCTCACGCTCGTGCAGGTTCT
ACGTCCTGTTTGGTGGTTGGGAGGGGAGAGAAGCTTAAACAAATGGCCTTCTGTGACCTGGCTG
CTGGGAGCAGGCTGGATTTCTTTAGCAGTTTGTCGGATTGCTTGGGGCTGTTGGCTGCAATAAA
CACACTGTCTCCCCCCGGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_037009	(Get FASTA)	NCBI Sequence Viewer
	XP_006242957	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB60506	(Get FASTA)	NCBI Sequence Viewer
	AAC52967	(Get FASTA)	NCBI Sequence Viewer
	EDL95352	(Get FASTA)	NCBI Sequence Viewer
	EDL95353	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000078627
	ENSRNOP00000078627.1
GenBank Protein	P54900	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_037009 ⟸ NM_012877
- Peptide Label:	precursor
- UniProtKB:	P54900 (UniProtKB/Swiss-Prot), A6J429 (UniProtKB/TrEMBL), Q62861 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHRDAWLPRPAFSLTGLSLFFSLVPSGRSMEVTVPTTLSVLNGSDTRLPCTFNSCYTVNHKQFS LNWTYQECSNCSEEMFLQFRMKIINLKLERFGDRVEFSGNPSKYDVSVTLKNVQLEDEGIYNCY ITNPPDRHRGHGKIYLQVLLEVPPERDSTVAVIVGASVGGFLAVVILVLMVVKCVRRKKEQKLS TDDLKTEEEGKTDGEGNAEDGAK hide sequence

RefSeq Acc Id:	XP_006242957 ⟸ XM_006242895
- Peptide Label:	isoform X1
- UniProtKB:	Q62861 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEVTVPTTLSVLNGSDTRLPCTFNSCYTVNHKQFSLNWTYQECSNCSEEMFLQFRMKIINLKLE RFGDRVEFSGNPSKYDVSVTLKNVQLEDEGIYNCYITNPPDRHRGHGKIYLQVLLEVPPERDST VAVIVGASVGGFLAVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNAEDGAK hide sequence

Ensembl Acc Id:

ENSRNOP00000021819 ⟸ ENSRNOT00000021819

Ensembl Acc Id:

ENSRNOP00000078627 ⟸ ENSRNOT00000106113

Protein Domains

Ig-like Ig-like C2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P54900-F1-model_v2	AlphaFold	P54900	1-215	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695913

Promoter ID:

EPDNEW_R6437

Type:

initiation region

Name:

Scn2b_1

Description:

sodium voltage-gated channel beta subunit 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	49,418,979 - 49,419,039	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3633	AgrOrtholog
BioCyc Gene	G2FUF-30681	BioCyc
Ensembl Genes	ENSRNOG00000016221	Ensembl
	ENSRNOG00000063505	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000106113	ENTREZGENE
	ENSRNOT00000106113.1	UniProtKB/Swiss-Prot
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_V-set	UniProtKB/Swiss-Prot
	Myelin_P0-rel	UniProtKB/Swiss-Prot
KEGG Report	rno:25349	UniProtKB/Swiss-Prot
NCBI Gene	25349	ENTREZGENE
PANTHER	PTHR13869	UniProtKB/Swiss-Prot
	PTHR13869:SF3	UniProtKB/Swiss-Prot
Pfam	V-set	UniProtKB/Swiss-Prot
PharmGKB	SCN2B	RGD
PhenoGen	Scn2b	PhenoGen
PRINTS	MYELINP0	UniProtKB/Swiss-Prot
PROSITE	IG_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000016221	RatGTEx
	ENSRNOG00000063505	RatGTEx
SMART	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
TIGR	TC236606
UniProt	A6J429	ENTREZGENE, UniProtKB/TrEMBL
	A6J430_RAT	UniProtKB/TrEMBL
	P54900	ENTREZGENE
	Q62861	ENTREZGENE, UniProtKB/TrEMBL
	SCN2B_RAT	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-11	Scn2b	sodium voltage-gated channel beta subunit 2	Scn2b	sodium channel, voltage-gated, type II, beta subunit	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-03-13	Scn2b	sodium channel, voltage-gated, type II, beta subunit	Scn2b	sodium channel, voltage-gated, type II, beta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Scn2b	sodium channel, voltage-gated, type II, beta			Name updated	1299863	APPROVED
2002-06-10	Scn2b	Sodium channel beta 2			Symbol and Name status set to approved	70586	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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