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Gene: Rad23b (RAD23 nucleotide excision repair protein B) Rattus norvegicus

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Symbol:

Rad23b

Name:

RAD23 nucleotide excision repair protein B (Ensembl:RAD23 homolog B, nucleotide excision repair protein)

RGD ID:

1562958

Description:

Predicted to enable several functions, including DNA damage sensor activity; proteasome binding activity; and ubiquitin binding activity. Involved in embryonic organ development. Predicted to be located in cytoplasm and nucleus. Predicted to be part of XPC complex. Predicted to be active in cytosol and nucleoplasm. Orthologous to human RAD23B (RAD23 homolog B, nucleotide excision repair protein); PARTICIPATES IN nucleotide excision repair pathway; Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH (+)-pilocarpine; 2,6-dinitrotoluene; 3-chloropropane-1,2-diol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC298012; MGC112630; RAD23 homolog B; RAD23 homolog B (S. cerevisiae); RAD23 homolog B, nucleotide excision repair protein; RAD23b homolog; RAD23b homolog (S. cerevisiae); similar to MHR23B; UV excision repair protein RAD23 homolog B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RAD23B (RAD23 nucleotide excision repair protein B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rad23b (RAD23 homolog B, nucleotide excision repair protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rad23b (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RAD23B (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RAD23B (RAD23 homolog B, nucleotide excision repair protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rad23b (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RAD23B (RAD23 homolog B, nucleotide excision repair protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RAD23B (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rad23b (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rad23b (RAD23 nucleotide excision repair protein B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RAD23B (RAD23 nucleotide excision repair protein B)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rad23b (RAD23 homolog B, nucleotide excision repair protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rad23ab (RAD23 homolog A, nucleotide excision repair protein b)	Alliance	DIOPT (OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	rad23b (RAD23 homolog B, nucleotide excision repair protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RAD23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RAD23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rad-23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rad-23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rad23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rad23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rad23b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	rad23b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	74,885,518 - 74,923,621 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	74,885,516 - 74,962,426 (+)	Ensembl				GRCr8
mRatBN7.2	5	70,090,232 - 70,128,340 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	70,090,232 - 70,128,319 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	71,970,372 - 72,008,648 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	73,797,196 - 73,835,069 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	73,769,324 - 73,807,197 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	72,103,704 - 72,141,701 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	72,103,704 - 72,141,700 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	76,267,574 - 76,305,117 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	73,256,542 - 73,294,296 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	68,949,047 - 68,987,190 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Craniofacial Abnormalities (ISO)

male infertility (ISO)

Prostatic Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-pilocarpine (EXP)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3-dimethoxynaphthalene-1,4-dione (ISO)

2,6-dimethoxyphenol (ISO)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one (ISO)

5-aza-2'-deoxycytidine (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

cadmium acetate (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorophyllin (ISO)

choline (ISO)

cisplatin (ISO)

coumarin (ISO)

cyclosporin A (ISO)

depsipeptide (ISO)

diarsenic trioxide (ISO)

dioxygen (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

ethyl methanesulfonate (ISO)

fenthion (ISO)

finasteride (EXP)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

furfural (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

indometacin (ISO)

irinotecan (ISO)

isobutanol (ISO)

isoniazide (ISO)

ivermectin (ISO)

L-methionine (ISO)

lead(0) (ISO)

leflunomide (EXP)

LY294002 (ISO)

MeIQx (ISO)

menadione (ISO)

Mesaconitine (EXP)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-nitrosodimethylamine (ISO)

nefazodone (EXP)

nitrates (ISO)

okadaic acid (ISO)

oxaliplatin (EXP)

p-menthan-3-ol (ISO)

paracetamol (EXP)

paraquat (EXP)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

PhIP (ISO)

pinosylvin (ISO)

pirinixic acid (ISO)

resveratrol (EXP)

rotenone (ISO)

Salinomycin (ISO)

SB 431542 (ISO)

selenium atom (ISO)

sodium arsenate (ISO)

sodium chloride (ISO)

sulfadimethoxine (EXP)

tetrachloromethane (EXP)

thapsigargin (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trans-pinosylvin (ISO)

Tributyltin oxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valdecoxib (EXP)

valproic acid (ISO)

vitamin E (ISO)

wortmannin (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to interleukin-7 (ISO)

chromatin remodeling (IEA)

DNA damage response (IEA,ISO)

DNA repair (IEA)

embryonic organ development (IEP)

nucleotide-excision repair (IEA,ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA,IEA)

regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA,ISO)

spermatogenesis (ISO)

Cellular Component

cytoplasm (IEA,ISO)

cytosol (IBA,IEA,ISO)

nucleoplasm (IBA,IEA,ISO)

nucleus (IEA,ISO,ISS)

proteasome complex (IEA)

XPC complex (IEA,ISO,ISS)

Molecular Function

damaged DNA binding (IEA)

dioxygenase activity (IEA)

DNA damage sensor activity (IEA,ISO)

histone H4K20 demethylase activity (IEA,ISO,ISS)

oxidoreductase activity (IEA)

polyubiquitin modification-dependent protein binding (IBA,IEA,ISO)

proteasome binding (IBA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA,ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA,ISO)

transcription cis-regulatory region binding (IEA,ISO)

ubiquitin binding (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Endoplasmic Reticulum-associated degradation pathway (IEA)

nucleotide excision repair pathway (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	TFIIH: when transcription met DNA repair.	Compe E and Egly JM, Nat Rev Mol Cell Biol. 2012 May 10;13(6):343-54. doi: 10.1038/nrm3350.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation
7.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
8.	Nucleotide excision repair gene expression in the rat conceptus during organogenesis.	Vinson RK and Hales BF, Mutat Res. 2001 Jul 12;486(2):113-23.

Additional References at PubMed

PMID:8168482	PMID:9734359	PMID:11279143	PMID:11809813	PMID:12815074	PMID:19182904	PMID:19435460	PMID:19941824	PMID:22431748	PMID:22871113	PMID:25901318	PMID:29581031

Genomics

Comparative Map Data

Rad23b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	74,885,518 - 74,923,621 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	74,885,516 - 74,962,426 (+)	Ensembl				GRCr8
mRatBN7.2	5	70,090,232 - 70,128,340 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	70,090,232 - 70,128,319 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	71,970,372 - 72,008,648 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	73,797,196 - 73,835,069 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	73,769,324 - 73,807,197 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	72,103,704 - 72,141,701 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	72,103,704 - 72,141,700 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	76,267,574 - 76,305,117 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	73,256,542 - 73,294,296 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	68,949,047 - 68,987,190 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

RAD23B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	107,283,279 - 107,332,194 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	107,283,137 - 107,332,192 (+)	Ensembl			hg38	GRCh38
GRCh37	9	110,045,560 - 110,094,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	109,085,365 - 109,134,291 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	107,125,098 - 107,174,025	NCBI
Celera	9	80,547,624 - 80,596,476 (+)	NCBI		Celera
Cytogenetic Map	9	q31.2	NCBI
HuRef	9	79,647,342 - 79,696,523 (+)	NCBI		HuRef
CHM1_1	9	110,192,246 - 110,241,111 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	119,455,054 - 119,503,938 (+)	NCBI		T2T-CHM13v2.0

Rad23b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	55,350,042 - 55,392,237 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	55,350,043 - 55,392,237 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	55,350,042 - 55,392,237 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	55,350,043 - 55,392,237 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	55,362,914 - 55,405,109 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	55,371,157 - 55,412,312 (+)	NCBI		MGSCv36	mm8
Celera	4	55,261,308 - 55,305,783 (+)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	29.7	NCBI

Rad23b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	19,429,970 - 19,460,796 (-)	Ensembl
ChiLan1.0	NW_004955419	19,428,415 - 19,473,181 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAD23B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	32,077,773 - 32,125,225 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	32,078,843 - 32,130,941 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	78,433,461 - 78,482,157 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	106,622,383 - 106,670,314 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	106,622,377 - 106,670,317 (+)	Ensembl			panPan2	panpan1.1

RAD23B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	62,732,989 - 62,778,957 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	62,732,984 - 62,775,978 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	61,131,232 - 61,177,125 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	63,874,392 - 63,920,316 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	63,874,474 - 63,918,434 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	62,397,151 - 62,443,059 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	62,407,466 - 62,453,391 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	63,109,368 - 63,155,283 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rad23b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	178,001,694 - 178,041,910 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936559	5,226,223 - 5,264,491 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936559	5,224,679 - 5,264,853 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAD23B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	248,448,265 - 248,493,647 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	248,447,991 - 248,493,651 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	278,901,650 - 278,947,022 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAD23B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	32,203,501 - 32,250,555 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	32,204,893 - 32,250,570 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666035	10,428,681 - 10,476,086 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rad23b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	4,167,215 - 4,211,487 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624758	4,168,341 - 4,211,893 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rad23b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	96,138,665 - 96,176,842 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rad23b
375 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	244
Count of miRNA genes:	149
Interacting mature miRNAs:	202
Transcripts:	ENSRNOT00000021629
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	73779642	118779642	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
61380	Edpm5	Estrogen-dependent pituitary mass QTL 5	4.5	0.92	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	5	73779642	103472210	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	65089051	103648916	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
7394708	Emca11	Estrogen-induced mammary cancer QTL 11			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	73176602	118176602	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	69474415	114474415	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
2290005	Mcs24	Mammary carcinoma susceptibility QTL 24			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	69835120	114835120	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	64589016	93503770	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	73779642	118779642	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	64589016	91762830	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
23	13	84	213	91	90	59	145	59	6	471	272	22	191	109	124	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001025275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC070960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC090351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC111406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021629 ⟹ ENSRNOP00000021629

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	74,885,516 - 74,924,652 (+)	Ensembl
mRatBN7.2 Ensembl	5	70,090,232 - 70,128,319 (+)	Ensembl
Rnor_6.0 Ensembl	5	72,103,704 - 72,141,700 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118370 ⟹ ENSRNOP00000097319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	74,885,516 - 74,924,652 (+)	Ensembl
mRatBN7.2 Ensembl	5	70,090,232 - 70,128,319 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142815 ⟹ ENSRNOP00000099817

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	74,885,516 - 74,962,426 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000143851 ⟹ ENSRNOP00000108434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	74,885,516 - 74,959,964 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000150344 ⟹ ENSRNOP00000103316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	74,885,516 - 74,933,858 (+)	Ensembl

RefSeq Acc Id:

NM_001025275 ⟹ NP_001020446

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	74,885,518 - 74,923,621 (+)	NCBI
mRatBN7.2	5	70,090,232 - 70,128,340 (+)	NCBI
Rnor_6.0	5	72,103,704 - 72,141,701 (+)	NCBI
Rnor_5.0	5	76,267,574 - 76,305,117 (+)	NCBI
RGSC_v3.4	5	73,256,542 - 73,294,296 (+)	RGD
Celera	5	68,949,047 - 68,987,190 (+)	RGD

Sequence:

show sequence

CTCGGCGAGTCACGGTGATGGCGGCCACCATCCTGTGGTGAGGTAGCGGATTCTCTGCGTCTCT
CCGGGAGTCCCTCGCGCCTCCTGCGGGCCCGGTGTCTGGCGCGTGAGGAAGCACCGCGGGTCGA
GCTTGCGGGGAAAGGCGCGGGAGCGGCGGCGCGGCCGGGGGACGCGGGGCCCGGGGTGAGCGCG
ACTCCGGGCGAATGTGACAAGCCCCCACCCCCACCGCCTTCCTCCCGAGAGCGCGAGGATCGCG
GCCACCCCGGGGCGGCCAGGCCCCGGCTTAGGCACCATGCAGGTCACCCTGAAGACCCTTCAGC
AGCAGACCTTCAAGATCGACATCGACCCGGAGGAGACGGTAAAGGCATTGAAAGAGAAGATTGA
ATCTGAGAAGGGGAAAGATGCCTTTCCGGTAGCAGGTCAGAAGTTAATTTATGCAGGCAAAATC
CTCAGTGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGG
TGACAAAGCCCAAAGCAGTGACATCAGCAGTGCCAGCTACAACCCAGCAATCAAGTTCTCCCAG
CACCACTACAGTCAGCTCCTCCCCTGCAGCAGCTGTGGCCCAGGCTCCAGCTCCCACCCCTGCT
CTGGCTCCCACTTCCACACCTGCCTCCACGACTCCAGCCTCAACTACAGCATCTTCTGAACCTG
CACCTACTGGTGCAACTCAGCCCGAGAAACCTGCAGAAAAGCCAGCACAGACACCAGTGCTTAC
TAGCCCAGCACCAGCTGACAGTACACCAGGAGATTCTTCTCGGTCAAATCTTTTTGAAGATGCA
ACAAGTGCCCTTGTGACAGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCT
ATGAACGAGAACAAGTAATTGCAGCCCTGAGAGCCAGCTTCAACAACCCTGATAGAGCTGTGGA
ATATCTTCTAATGGGAATCCCTGGAGACAGAGAAAGTCAGGCCGTGGTTGATCCTCCTCCACAG
GCTGTGAGTACTGGAACTCCTCAGTCTCCAGCAGTAGCTGCAGCTGCAGCAACCACAACAGCAA
CGACAACCACCACTTCTGGAGGCCACCCCCTTGAGTTTTTACGGAATCAGCCTCAGTTTCAACA
GATGAGACAAATTATCCAGCAGAACCCCTCCTTGCTTCCTGCTTTGCTACAGCAGATAGGCCGG
GAGAACCCTCAGTTGCTGCAGCAAATTAGCCAACACCAGGAGCATTTTATTCAGATGCTAAATG
AACCGGTTCAGGAAGCTGGTGGTCAAGGTGGAGGAGGAGGTGGTGGAGGTGGTGGAGGTGGAGG
CGGTGGAGGAATTGCAGAAGCTGGCAGTGGTCACATGAACTACATCCAAGTAACACCTCAGGAG
AAAGAAGCTATAGAACGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATTCAAGCATACT
TTGCTTGTGAGAAGAACGAGAATCTGGCGGCCAACTTTCTTCTACAGCAGAACTTTGATGAAGA
CTGAAGGGACTCTTTTGTACCTCACACTCACACCAGTGCATTACACTAACCTTGTTCACTGGAT
TGTCTGGGGTGACTTGGGCTCATATCCACAATATTTGGTATACGGTAGTAGGTTGGTGGGGTGG
GGGTGGGGAGCTAGGCTATAGGGCAGGGATACATACAGTGCATGTCTGCTTCAGTCAGCAGATG
CTGCAGGTCCACACAGTGTAAAATACTACACAACCAAACACCGCCTTTACAGGGCTTTATTCTT
CTACGCAGTAGGTAACTTTTCCTGGGTTTCATTCTTTCTAGTGTACTAGATCCAGAAATTTAGT
GTGATGCCCTGCTTTCTCTTTTCTTTGACTTAACATTGGTTTCTGAAAGAATCTTTGCTACCTA
GAATCTACAGTCTGTTTTATGGCAACACTGGATAATGGCTTTTTGAAATTGAGGGGGAAACATT
GGAGCATCTGTAAACAGAAATGCCAAATTATTGATAGTCATTGTTGCTGCTTCACATGAGTATG
AAATTGATGCAGAAGGAAGCCCATTCTTCATGTTCAGTGCTTAGGGTGGGGAGGGCAGAAAGGG
GGCTTTTTCTTAAAATGAAAATAATTACTGCTATTTTAAAATTTCTTGATTATTGAATGTGAGC
CCCTCTATCTAACATGATTTGAGAAGCTGTACACTTATAGGCAGAGTTATTTTCCTGTTTACAT
TCTGTGTTGTTTGGGGGATTGGTAGGTGTCTGATTACTGTTTACTTCACTGTTGTGTTGCAGTA
AAAGACTTAAAACAACCATTGCATGTTTGCTTTCGGTGTATCCCTTTGTGAAATTAGCACTTTT
GGGGCCAATGAAGAAACTTTGCTGCATTTACTCCCTTTCCCTCCCCTTTCCTCAGTAGAAATGT
GTTTGATCAGCAAGTTGTGAGTCAAACTGCTGCCTTTAAAAACACCACAAAAGCTGATTCAGTT
CAAAATGAACGCACATCTTTCAAAACTGGGTTTCTGATACTTGTGGATGTTTTTCTTTATTAGA
TAAGAATGTATTGCCATTAAATCCATTAGTATTACATTGCTTTCAAAGAAAAGGTGGGTGGAAC
TATAATCCAGCATCTTTTACTGCATTCAAAGATGGGAGCAAACTTTTGTATGGTTGGGAGATGT
GGCTGGAAAGTACTTTGGAAAATATACAATCAAGCTATTTCGTCGCATATTAAAAGAAAAATCT
CAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001020446	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH70960	(Get FASTA)	NCBI Sequence Viewer
	AAH90351	(Get FASTA)	NCBI Sequence Viewer
	AAH98674	(Get FASTA)	NCBI Sequence Viewer
	AAI11407	(Get FASTA)	NCBI Sequence Viewer
	EDL91699	(Get FASTA)	NCBI Sequence Viewer
	EDL91700	(Get FASTA)	NCBI Sequence Viewer
	EDL91701	(Get FASTA)	NCBI Sequence Viewer
	EDL91702	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021629
	ENSRNOP00000021629.4
GenBank Protein	Q4KMA2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001020446 ⟸ NM_001025275

- UniProtKB:

Q5CZZ8 (UniProtKB/Swiss-Prot), Q0D2G8 (UniProtKB/Swiss-Prot), Q6IRD5 (UniProtKB/Swiss-Prot), Q4KMA2 (UniProtKB/Swiss-Prot), A6KDQ3 (UniProtKB/TrEMBL), A0A8I6AUT2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALKEYKI
DEKNFVVVMVTKPKAVTSAVPATTQQSSSPSTTTVSSSPAAAVAQAPAPTPALAPTSTPASTTP
ASTTASSEPAPTGATQPEKPAEKPAQTPVLTSPAPADSTPGDSSRSNLFEDATSALVTGQSYEN
MVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVDPPPQAVSTGTPQSPAV
AAAAATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQH
QEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGF
PEGLVIQAYFACEKNENLAANFLLQQNFDED

hide sequence

Ensembl Acc Id:

ENSRNOP00000021629 ⟸ ENSRNOT00000021629

Ensembl Acc Id:

ENSRNOP00000097319 ⟸ ENSRNOT00000118370

Ensembl Acc Id:

ENSRNOP00000108434 ⟸ ENSRNOT00000143851

Ensembl Acc Id:

ENSRNOP00000103316 ⟸ ENSRNOT00000150344

Ensembl Acc Id:

ENSRNOP00000099817 ⟸ ENSRNOT00000142815

Protein Domains

STI1 UBA Ubiquitin-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4KMA2-F1-model_v2	AlphaFold	Q4KMA2	1-415	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693749

Promoter ID:

EPDNEW_R4274

Type:

multiple initiation site

Name:

Rad23b_1

Description:

RAD23 homolog B, nucleotide excision repair protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	72,103,710 - 72,103,770	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562958	AgrOrtholog
BioCyc Gene	G2FUF-41244	BioCyc
Ensembl Genes	ENSRNOG00000016137	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000021629	ENTREZGENE
	ENSRNOT00000021629.7	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.10.540	UniProtKB/Swiss-Prot
	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/Swiss-Prot
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7099379	IMAGE-MGC_LOAD
	IMAGE:7190031	IMAGE-MGC_LOAD
	IMAGE:7312455	IMAGE-MGC_LOAD
	IMAGE:7445676	IMAGE-MGC_LOAD
InterPro	Rad23	UniProtKB/Swiss-Prot
	RAD23A/B_UBA1	UniProtKB/Swiss-Prot
	STI1_HS-bd	UniProtKB/Swiss-Prot
	UBA	UniProtKB/Swiss-Prot
	UBA-like_sf	UniProtKB/Swiss-Prot
	Ubiquitin-like_domsf	UniProtKB/Swiss-Prot
	Ubiquitin_dom	UniProtKB/Swiss-Prot
	XPC-bd	UniProtKB/Swiss-Prot
	XPC-bd_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:298012	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105481	IMAGE-MGC_LOAD
	MGC:112630	IMAGE-MGC_LOAD
	MGC:124964	IMAGE-MGC_LOAD
	MGC:91771	IMAGE-MGC_LOAD
NCBI Gene	298012	ENTREZGENE
PANTHER	UV EXCISION REPAIR PROTEIN RAD23	UniProtKB/Swiss-Prot
	UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG B	UniProtKB/Swiss-Prot
Pfam	UBA	UniProtKB/Swiss-Prot
	ubiquitin	UniProtKB/Swiss-Prot
	XPC-binding	UniProtKB/Swiss-Prot
PhenoGen	Rad23b	PhenoGen
PRINTS	RAD23PROTEIN	UniProtKB/Swiss-Prot
PROSITE	UBA	UniProtKB/Swiss-Prot
	UBIQUITIN_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000016137	RatGTEx
SMART	STI1	UniProtKB/Swiss-Prot
	UBA	UniProtKB/Swiss-Prot
	UBQ	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF101238	UniProtKB/Swiss-Prot
	SSF46934	UniProtKB/Swiss-Prot
	SSF54236	UniProtKB/Swiss-Prot
UniProt	A0A8I6AUT2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LD01_RAT	UniProtKB/TrEMBL
	A0ABK0LDD2_RAT	UniProtKB/TrEMBL
	A0ABK0LRA1_RAT	UniProtKB/TrEMBL
	A6KDQ3	ENTREZGENE, UniProtKB/TrEMBL
	A6KDQ4_RAT	UniProtKB/TrEMBL
	A6KDQ6_RAT	UniProtKB/TrEMBL
	Q0D2G8	ENTREZGENE
	Q4KMA2	ENTREZGENE
	Q5CZZ8	ENTREZGENE
	Q6IRD5	ENTREZGENE
	RD23B_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	Q0D2G8	UniProtKB/Swiss-Prot
	Q5CZZ8	UniProtKB/Swiss-Prot
	Q6IRD5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2025-11-13	Rad23b	RAD23 nucleotide excision repair protein B	Rad23b	RAD23 homolog B, nucleotide excision repair protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-07-17	Rad23b	RAD23 homolog B, nucleotide excision repair protein	Rad23b	RAD23 homolog B (S. cerevisiae)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-24	Rad23b	RAD23 homolog B (S. cerevisiae)	Rad23b	RAD23b homolog (S. cerevisiae)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Rad23b	RAD23b homolog (S. cerevisiae)	LOC298012	similar to MHR23B	Symbol and Name updated	1299863	APPROVED
2006-02-09	LOC298012	similar to MHR23B			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)