Antxr2 (ANTXR cell adhesion molecule 2) - Rat Genome Database

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Gene: Antxr2 (ANTXR cell adhesion molecule 2) Rattus norvegicus
Analyze
Symbol: Antxr2
Name: ANTXR cell adhesion molecule 2
RGD ID: 1561294
Description: Predicted to enable transmembrane signaling receptor activity. Predicted to act upstream of or within collagen fibril organization; single fertilization; and uterus development. Predicted to be located in external side of plasma membrane. Predicted to be active in cell surface and plasma membrane. Used to study anthrax disease. Human ortholog(s) of this gene implicated in fibroma and hyaline fibromatosis syndrome. Orthologous to human ANTXR2 (ANTXR cell adhesion molecule 2); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: anthrax toxin receptor 2; hypothetical protein LOC305633; uncharacterized protein LOC305633
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81411,845,774 - 11,986,166 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1411,845,700 - 11,986,168 (+)EnsemblGRCr8
mRatBN7.21411,541,718 - 11,682,110 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1411,541,772 - 11,682,094 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1411,508,043 - 11,649,779 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01412,807,886 - 12,949,630 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01411,503,854 - 11,644,105 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01413,191,716 - 13,331,286 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1413,192,347 - 13,274,978 (+)Ensemblrn6Rnor6.0
Rnor_5.01413,133,302 - 13,273,123 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41412,875,632 - 13,107,975 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1411,613,633 - 11,752,440 (+)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-nitropyrene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,4'-trichlorobiphenyl  (ISO)
3,4-dichloroaniline  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
buspirone  (EXP)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cantharidin  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
dioxygen  (ISO)
diuron  (EXP,ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
glafenine  (EXP)
indometacin  (ISO)
inulin  (ISO)
L-methionine  (ISO)
lead diacetate  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methapyrilene  (ISO)
methimazole  (EXP)
methoxychlor  (EXP)
methylisothiazolinone  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
nefazodone  (EXP)
nickel sulfate  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
propanal  (ISO)
quercetin  (ISO)
S-nitrosoglutathione  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Mutations in the gene encoding capillary morphogenesis protein 2 cause juvenile hyaline fibromatosis and infantile systemic hyalinosis. Hanks S, etal., Am J Hum Genet. 2003 Oct;73(4):791-800. Epub 2003 Aug 21.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. Anthrax toxin receptor 2-dependent lethal toxin killing in vivo. Scobie HM, etal., PLoS Pathog. 2006 Oct;2(10):e111.
9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:19617532   PMID:23716698   PMID:28077422   PMID:36915057  


Genomics

Comparative Map Data
Antxr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81411,845,774 - 11,986,166 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1411,845,700 - 11,986,168 (+)EnsemblGRCr8
mRatBN7.21411,541,718 - 11,682,110 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1411,541,772 - 11,682,094 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1411,508,043 - 11,649,779 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01412,807,886 - 12,949,630 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01411,503,854 - 11,644,105 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01413,191,716 - 13,331,286 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1413,192,347 - 13,274,978 (+)Ensemblrn6Rnor6.0
Rnor_5.01413,133,302 - 13,273,123 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41412,875,632 - 13,107,975 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1411,613,633 - 11,752,440 (+)NCBICelera
Cytogenetic Map14p22NCBI
ANTXR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38479,901,146 - 80,073,472 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl479,901,146 - 80,125,454 (-)Ensemblhg38GRCh38
GRCh37480,822,300 - 80,994,626 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36481,045,749 - 81,213,277 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34481,183,903 - 81,351,119NCBI
Celera478,122,440 - 78,287,976 (-)NCBICelera
Cytogenetic Map4q21.21NCBI
HuRef476,572,333 - 76,737,910 (-)NCBIHuRef
CHM1_1480,799,284 - 80,970,975 (-)NCBICHM1_1
T2T-CHM13v2.0483,237,562 - 83,403,767 (-)NCBIT2T-CHM13v2.0
Antxr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39598,032,547 - 98,178,876 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl598,030,642 - 98,178,902 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38597,884,688 - 98,031,017 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl597,882,783 - 98,031,043 (-)Ensemblmm10GRCm38
MGSCv37598,313,707 - 98,459,981 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36598,124,990 - 98,271,264 (-)NCBIMGSCv36mm8
Celera595,232,772 - 95,364,676 (-)NCBICelera
Cytogenetic Map5E3NCBI
cM Map547.77NCBI
Antxr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554334,212,729 - 4,345,066 (-)Ensembl
ChiLan1.0NW_0049554334,212,729 - 4,345,611 (-)NCBIChiLan1.0ChiLan1.0
ANTXR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2349,991,825 - 50,152,945 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1450,182,517 - 50,343,402 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0444,124,282 - 44,284,949 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1449,972,472 - 50,132,740 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl449,972,472 - 50,132,738 (+)EnsemblpanPan2panpan1.1
ANTXR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1324,143,407 - 4,302,194 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl324,148,310 - 4,302,071 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3237,578,921 - 37,738,121 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0324,166,040 - 4,325,988 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl324,167,895 - 4,325,767 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1324,206,174 - 4,365,346 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0324,103,843 - 4,262,993 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03235,701,505 - 35,861,446 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Antxr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244052858,013,156 - 8,091,188 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367491,936,449 - 2,015,200 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367491,936,307 - 2,014,452 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANTXR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8137,618,616 - 137,878,333 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18137,728,849 - 137,878,336 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28146,872,430 - 147,020,217 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANTXR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1728,345,849 - 28,499,818 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl728,375,899 - 28,499,522 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660376,795,315 - 6,949,937 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Antxr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475710,972,692 - 11,125,898 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475710,972,976 - 11,123,103 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Antxr2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1116,234,657 - 6,317,428 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Antxr2
1333 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:13
Count of miRNA genes:13
Interacting mature miRNAs:13
Transcripts:ENSRNOT00000000092
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14395787821572472Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14395787818558812Rat
7411573Bw139Body weight QTL 1394.70.001body mass (VT:0001259)body weight gain (CMO:0000420)14140068101Rat
9589814Gluco67Glucose level QTL 674.540.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14140068101Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14939329839411170Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141133490630674469Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141133471628389666Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14395787831121464Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14117877928Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14862139853621398Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14395787824886169Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141415516Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14131893212Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14862139853621398Rat

Markers in Region
D14Got154  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21411,605,052 - 11,605,253 (+)MAPPERmRatBN7.2
Rnor_6.01413,254,387 - 13,254,587NCBIRnor6.0
Rnor_5.01413,196,224 - 13,196,424UniSTSRnor5.0
RGSC_v3.41413,031,565 - 13,031,765UniSTSRGSC3.4
Celera1411,675,802 - 11,676,002UniSTS
Cytogenetic Map14p22UniSTS
RH130205  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81411,985,928 - 11,986,113 (+)Marker Load Pipeline
mRatBN7.21411,681,872 - 11,682,057 (+)MAPPERmRatBN7.2
Rnor_6.01413,331,047 - 13,331,231NCBIRnor6.0
Rnor_5.01413,272,884 - 13,273,068UniSTSRnor5.0
RGSC_v3.41413,109,111 - 13,109,295UniSTSRGSC3.4
Celera1411,752,201 - 11,752,385UniSTS
RH 3.4 Map14154.47UniSTS
Cytogenetic Map14p22UniSTS
RH133840  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21411,632,849 - 11,633,036 (+)MAPPERmRatBN7.2
Rnor_6.01413,282,183 - 13,282,369NCBIRnor6.0
Rnor_5.01413,224,020 - 13,224,206UniSTSRnor5.0
RGSC_v3.41413,059,361 - 13,059,547UniSTSRGSC3.4
Celera1411,703,590 - 11,703,776UniSTS
RH 3.4 Map14210.6UniSTS
Cytogenetic Map14p22UniSTS
RH143314  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21411,542,088 - 11,542,232 (+)MAPPERmRatBN7.2
Rnor_6.01413,192,125 - 13,192,268NCBIRnor6.0
Rnor_5.01413,133,770 - 13,133,913UniSTSRnor5.0
Celera1411,614,042 - 11,614,185UniSTS
RH 3.4 Map14212.7UniSTS
Cytogenetic Map14p22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000000092   ⟹   ENSRNOP00000000092
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1411,845,700 - 11,929,717 (+)Ensembl
mRatBN7.2 Ensembl1411,541,772 - 11,625,657 (+)Ensembl
Rnor_6.0 Ensembl1413,192,347 - 13,274,978 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000096178   ⟹   ENSRNOP00000083517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1411,845,700 - 11,951,529 (+)Ensembl
mRatBN7.2 Ensembl1411,541,772 - 11,647,469 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000115625   ⟹   ENSRNOP00000085407
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1411,541,772 - 11,627,045 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000119294   ⟹   ENSRNOP00000087704
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1411,845,700 - 11,986,168 (+)Ensembl
mRatBN7.2 Ensembl1411,542,218 - 11,682,094 (+)Ensembl
RefSeq Acc Id: NM_001398916   ⟹   NP_001385845
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81411,845,774 - 11,986,166 (+)NCBI
mRatBN7.21411,541,718 - 11,682,110 (+)NCBI
RefSeq Acc Id: XM_039092655   ⟹   XP_038948583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81411,846,367 - 11,968,674 (+)NCBI
mRatBN7.21411,542,266 - 11,667,983 (+)NCBI
RefSeq Acc Id: XM_063273302   ⟹   XP_063129372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81411,846,367 - 11,932,556 (+)NCBI
RefSeq Acc Id: XR_010057380
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81411,846,367 - 11,986,166 (+)NCBI
Ensembl Acc Id: ENSRNOP00000000092   ⟸   ENSRNOT00000000092
RefSeq Acc Id: XP_038948583   ⟸   XM_039092655
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A6B8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000083517   ⟸   ENSRNOT00000096178
Ensembl Acc Id: ENSRNOP00000085407   ⟸   ENSRNOT00000115625
Ensembl Acc Id: ENSRNOP00000087704   ⟸   ENSRNOT00000119294
RefSeq Acc Id: NP_001385845   ⟸   NM_001398916
- Peptide Label: precursor
- UniProtKB: Q00IM8 (UniProtKB/TrEMBL),   A0A8I6A6B8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129372   ⟸   XM_063273302
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A282 (UniProtKB/TrEMBL),   A0A8I6A6B8 (UniProtKB/TrEMBL)
Protein Domains
VWFA

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LT78-F1-model_v2 AlphaFold F1LT78 1-489 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699220
Promoter ID:EPDNEW_R9724
Type:multiple initiation site
Name:Antxr2_1
Description:anthrax toxin receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01413,192,283 - 13,192,343EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1561294 AgrOrtholog
BioCyc Gene G2FUF-16358 BioCyc
Ensembl Genes ENSRNOG00000000081 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000000092.8 UniProtKB/TrEMBL
  ENSRNOT00000096178 ENTREZGENE
  ENSRNOT00000096178.2 UniProtKB/TrEMBL
  ENSRNOT00000119294 ENTREZGENE
  ENSRNOT00000119294.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.410 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7322598 IMAGE-MGC_LOAD
InterPro Anthrax_toxin_rcpt UniProtKB/TrEMBL
  Anthrax_toxin_rcpt_C UniProtKB/TrEMBL
  Anthrax_toxin_rcpt_extracel UniProtKB/TrEMBL
  VWF_A UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/TrEMBL
MGC_CLONE MGC:109492 IMAGE-MGC_LOAD
NCBI Gene 305633 ENTREZGENE
PANTHER ANTHRAX TOXIN RECEPTOR UniProtKB/TrEMBL
  PTHR16059:SF13 UniProtKB/TrEMBL
Pfam Ant_C UniProtKB/TrEMBL
  Anth_Ig UniProtKB/TrEMBL
  VWA UniProtKB/TrEMBL
PhenoGen Antxr2 PhenoGen
PIRSF Anthrax_toxin_receptor_2 UniProtKB/TrEMBL
PROSITE VWFA UniProtKB/TrEMBL
RatGTEx ENSRNOG00000000081 RatGTEx
SMART VWA UniProtKB/TrEMBL
Superfamily-SCOP SSF53300 UniProtKB/TrEMBL
UniProt A0A8I5ZVI5_RAT UniProtKB/TrEMBL
  A0A8I6A282 ENTREZGENE
  A0A8I6A6B8 ENTREZGENE
  F1LT78_RAT UniProtKB/TrEMBL
  Q00IM8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8I6A6B8 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-18 Antxr2  ANTXR cell adhesion molecule 2  Antxr2  anthrax toxin receptor 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-03-15 Antxr2  anthrax toxin receptor 2  LOC305633  similar to Antxr2 protein  Name and Symbol changed 629549 APPROVED
2006-02-09 LOC305633  similar to Antxr2 protein      Symbol and Name status set to provisional 70820 PROVISIONAL