Arsa (arylsulfatase A) - Rat Genome Database

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Gene: Arsa (arylsulfatase A) Rattus norvegicus
Analyze
Symbol: Arsa
Name: arylsulfatase A
RGD ID: 1310381
Description: Enables arylsulfatase activity. Involved in several processes, including response to estrogen; response to ethanol; and response to methylmercury. Located in acrosomal vesicle; endosome; and extracellular space. Is extrinsic component of external side of plasma membrane. Used to study hypothyroidism. Human ortholog(s) of this gene implicated in metachromatic leukodystrophy. Orthologous to human ARSA (arylsulfatase A); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC315222; MGC125207
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87122,422,971 - 122,426,971 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7122,422,982 - 122,428,401 (-)EnsemblGRCr8
mRatBN7.27120,542,788 - 120,547,577 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7120,543,362 - 120,548,783 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7122,296,387 - 122,298,913 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07124,522,533 - 124,525,059 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07124,484,772 - 124,487,298 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07130,446,644 - 130,452,632 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7130,446,668 - 130,451,283 (-)Ensemblrn6Rnor6.0
Rnor_5.07130,131,465 - 130,137,453 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47127,790,208 - 127,792,734 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7117,017,039 - 117,019,565 (-)NCBICelera
RGSC_v3.17127,824,434 - 127,826,966 (-)NCBI
Cytogenetic Map7q34NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Hypothyroidism in the adult rat causes brain region-specific biochemical dysfunction. Ahmed MT, etal., J Endocrinol. 1993 Aug;138(2):299-305.
2. Late onset MLD with normal nerve conduction associated with two novel missense mutations in the ASA gene. Gallo S, etal., J Neurol Neurosurg Psychiatry 2004 Apr;75(4):655-7.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Ethanol decreases rat hepatic arylsulfatase A activity levels. Jean S, etal., Alcohol Clin Exp Res. 2006 Nov;30(11):1950-5.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Rat sperm AS-A: subcellular localization in testis and epididymis and surface distribution in epididymal sperm. Ngernsoungnern A, etal., Cell Tissue Res. 2004 Nov;318(2):353-63. Epub 2004 Sep 30.
8. The effect of pH on the kinetics of arylsulphatases A and B. O'Fagain C, etal., Biochem J. 1983 Sep 1;213(3):603-7.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
11. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
12. GOA pipeline RGD automated data pipeline
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Autophagy-related changes of arylsulphatases A and B in rat liver lysosomes. Sanghavi P and Koenig H, Biochem J. 1976 Jun 1;155(3):725-8.
16. ASA E382K disrupts a potential exonic splicing enhancer and causes exon skipping, but missense mutations in ASA are not associated with ESEs. Shotelersuk V, etal., Int J Mol Med 2004 Oct;14(4):683-9.
17. Studies on urinary arylsulphatase activity in vitamin A deficient rats. Srinivas L and Rao PB, Int J Vitam Nutr Res. 1976;46(1):3-10.
18. Role of sperm surface arylsulfatase A in mouse sperm-zona pellucida binding. Tantibhedhyangkul J, etal., Biol Reprod 2002 Jul;67(1):212-9.
19. Developmental profiles of arylsulfatases A and B in rat cerebral cortex and spinal cord. van der Pal RH, etal., Biochim Biophys Acta. 1991 Feb 5;1081(3):315-20.
20. Inability of thiol compounds to restore CNS arylsulfatases inhibited by methyl mercury. Vinay SD and Sood PP, Pharmacol Toxicol. 1991 Jul;69(1):71-4.
21. Purification of rat liver arylsulfatase A and its microheterogeneity assayed by crossed affinity-immunoelectrophoresis. Wojczyk B, etal., Acta Biochim Pol. 1992;39(4):355-67.
22. Enzymic changes in the cervix of the rat and hamster during the oestrous cycle and the effect of steroids. Zachariah E and Moudgal NR, J Endocrinol. 1977 Feb;72(2):153-61.
Additional References at PubMed
PMID:12477932   PMID:12888274   PMID:15962010   PMID:16174644   PMID:23376485   PMID:23533145   PMID:24006456  


Genomics

Comparative Map Data
Arsa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87122,422,971 - 122,426,971 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7122,422,982 - 122,428,401 (-)EnsemblGRCr8
mRatBN7.27120,542,788 - 120,547,577 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7120,543,362 - 120,548,783 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7122,296,387 - 122,298,913 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07124,522,533 - 124,525,059 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07124,484,772 - 124,487,298 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07130,446,644 - 130,452,632 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7130,446,668 - 130,451,283 (-)Ensemblrn6Rnor6.0
Rnor_5.07130,131,465 - 130,137,453 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47127,790,208 - 127,792,734 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7117,017,039 - 117,019,565 (-)NCBICelera
RGSC_v3.17127,824,434 - 127,826,966 (-)NCBI
Cytogenetic Map7q34NCBI
ARSA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382250,622,754 - 50,628,152 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2250,622,754 - 50,628,177 (-)Ensemblhg38GRCh38
GRCh372251,061,182 - 51,066,580 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362249,410,315 - 49,413,473 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342249,353,599 - 49,356,720NCBI
Celera2234,939,475 - 34,942,633 (-)NCBICelera
Cytogenetic Map22q13.33ENTREZGENE
HuRef2233,951,640 - 33,957,003 (-)NCBIHuRef
CHM1_12251,019,964 - 51,025,351 (-)NCBICHM1_1
T2T-CHM13v2.02251,133,297 - 51,138,663 (-)NCBIT2T-CHM13v2.0
Arsa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391589,356,679 - 89,361,627 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1589,356,679 - 89,361,628 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381589,472,476 - 89,477,424 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1589,472,476 - 89,477,425 (-)Ensemblmm10GRCm38
MGSCv371589,302,907 - 89,307,855 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361589,300,261 - 89,316,421 (-)NCBIMGSCv36mm8
Celera1591,601,657 - 91,606,605 (-)NCBICelera
Cytogenetic Map15E3NCBI
cM Map1544.94NCBI
Arsa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541333,623,525 - 33,629,771 (-)Ensembl
ChiLan1.0NW_00495541333,624,460 - 33,629,491 (-)NCBIChiLan1.0ChiLan1.0
ARSA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22360,542,613 - 60,545,784 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12263,231,615 - 63,236,318 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02230,868,812 - 30,871,970 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12249,978,955 - 49,982,108 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2249,978,955 - 49,982,099 (-)EnsemblpanPan2panpan1.1
ARSA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11016,691,927 - 16,694,346 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1016,691,758 - 16,695,398 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1016,669,563 - 16,671,982 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01017,418,229 - 17,420,648 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1017,417,717 - 17,423,153 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11017,142,642 - 17,145,061 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01017,465,701 - 17,468,120 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01017,597,813 - 17,600,232 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Arsa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945187,281 - 205,493 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936629187,275 - 191,008 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936629187,281 - 205,493 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARSA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5107,149 - 111,518 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.15107,103 - 110,330 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pig Cytomap5p15-p11NCBI
ARSA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11933,102,803 - 33,105,958 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1933,100,117 - 33,105,926 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366654618,495 - 21,647 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arsa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624752149,187 - 153,746 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624752149,248 - 153,625 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Arsa
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11258,779,114 - 258,783,658 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Arsa
15 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:154
Count of miRNA genes:111
Interacting mature miRNAs:134
Transcripts:ENSRNOT00000017783
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7121393075137014596Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7119280025135560836Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7115313999136544683Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)7116269196132020414Rat
1582240Sffal1Serum free fatty acids level QTL 13.40.0021blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)7118556868125929417Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
BI277783  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,543,372 - 120,543,559 (+)MAPPERmRatBN7.2
Rnor_6.07130,447,229 - 130,447,415NCBIRnor6.0
Rnor_5.07130,132,050 - 130,132,236UniSTSRnor5.0
RGSC_v3.47127,789,146 - 127,789,332UniSTSRGSC3.4
Celera7117,015,977 - 117,016,163UniSTS
RH 3.4 Map7949.5UniSTS
Cytogenetic Map7q34UniSTS
DLAT  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,545,879 - 120,546,081 (+)MAPPERmRatBN7.2
Rnor_6.07130,449,736 - 130,449,937NCBIRnor6.0
Rnor_5.07130,134,557 - 130,134,758UniSTSRnor5.0
RGSC_v3.47127,791,653 - 127,791,854UniSTSRGSC3.4
Celera7117,018,484 - 117,018,685UniSTS
Cytogenetic Map7q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000017783   ⟹   ENSRNOP00000017782
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7122,422,982 - 122,428,401 (-)Ensembl
mRatBN7.2 Ensembl7120,543,362 - 120,548,783 (-)Ensembl
Rnor_6.0 Ensembl7130,446,668 - 130,451,283 (-)Ensembl
RefSeq Acc Id: NM_001034933   ⟹   NP_001030105
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87122,422,971 - 122,426,971 (-)NCBI
mRatBN7.27120,543,351 - 120,547,351 (-)NCBI
Rnor_6.07130,448,291 - 130,450,817 (-)NCBI
Rnor_5.07130,131,465 - 130,137,453 (-)NCBI
RGSC_v3.47127,790,208 - 127,792,734 (-)RGD
Celera7117,017,039 - 117,019,565 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001030105 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI05853 (Get FASTA)   NCBI Sequence Viewer  
  CAI84981 (Get FASTA)   NCBI Sequence Viewer  
  EDL76575 (Get FASTA)   NCBI Sequence Viewer  
  EDL76576 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000017782
  ENSRNOP00000017782.4
RefSeq Acc Id: NP_001030105   ⟸   NM_001034933
- Peptide Label: precursor
- UniProtKB: Q32KK2 (UniProtKB/TrEMBL),   F7FF93 (UniProtKB/TrEMBL),   Q3KR80 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017782   ⟸   ENSRNOT00000017783
Protein Domains
Sulfatase N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q32KK2-F1-model_v2 AlphaFold Q32KK2 1-507 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695590
Promoter ID:EPDNEW_R6115
Type:initiation region
Name:Arsa_1
Description:arylsulfatase A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07130,451,207 - 130,451,267EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310381 AgrOrtholog
BioCyc Gene G2FUF-32432 BioCyc
Ensembl Genes ENSRNOG00000012953 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000017783 ENTREZGENE
  ENSRNOT00000017783.8 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1120.10 UniProtKB/TrEMBL
  3.40.720.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7452956 IMAGE-MGC_LOAD
InterPro Alkaline_phosphatase_core UniProtKB/TrEMBL
  Sulfatase UniProtKB/TrEMBL
  Sulfatase UniProtKB/TrEMBL
  Sulfatase_CS UniProtKB/TrEMBL
KEGG Report rno:315222 UniProtKB/TrEMBL
MGC_CLONE MGC:125207 IMAGE-MGC_LOAD
NCBI Gene 315222 ENTREZGENE
PANTHER ARYLSULFATASE A UniProtKB/TrEMBL
  ARYLSULFATASE FAMILY MEMBER UniProtKB/TrEMBL
Pfam Sulfatase UniProtKB/TrEMBL
  Sulfatase_C UniProtKB/TrEMBL
PhenoGen Arsa PhenoGen
PROSITE SULFATASE_1 UniProtKB/TrEMBL
  SULFATASE_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012953 RatGTEx
Superfamily-SCOP Alkaline_phosphatase_core UniProtKB/TrEMBL
UniProt A6K7N3_RAT UniProtKB/TrEMBL
  F7FF93 ENTREZGENE, UniProtKB/TrEMBL
  Q32KK2 ENTREZGENE, UniProtKB/TrEMBL
  Q3KR80 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Arsa  arylsulfatase A  Arsa_predicted  arylsulfatase A (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Arsa_predicted  arylsulfatase A (predicted)      Symbol and Name status set to approved 70820 APPROVED