Ptpn20 (protein tyrosine phosphatase, non-receptor type 20) - Rat Genome Database

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Gene: Ptpn20 (protein tyrosine phosphatase, non-receptor type 20) Rattus norvegicus
Analyze
Symbol: Ptpn20
Name: protein tyrosine phosphatase, non-receptor type 20
RGD ID: 1309812
Description: Predicted to be located in centriolar satellite. Predicted to be active in cytoplasm and cytoplasmic side of plasma membrane. Orthologous to human PTPN20 (protein tyrosine phosphatase non-receptor type 20); INTERACTS WITH bisphenol A; cadmium dichloride; 4,4'-sulfonyldiphenol (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC306281; protein tyrosine phosphatase, non-receptor type 20B; Ptpn20b; tyrosine-protein phosphatase non-receptor type 20
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8168,891,828 - 8,956,037 (+)NCBIGRCr8
mRatBN7.2168,885,585 - 8,949,805 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl168,893,324 - 8,949,783 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx168,912,901 - 8,969,351 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01610,057,607 - 10,114,055 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0168,907,992 - 8,964,448 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0169,907,584 - 9,973,514 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl169,907,598 - 9,973,516 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01611,858,454 - 11,922,332 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4169,200,233 - 9,256,753 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1169,192,522 - 9,243,208 (+)NCBI
Celera166,258,200 - 6,314,563 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:35658898  


Genomics

Comparative Map Data
Ptpn20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8168,891,828 - 8,956,037 (+)NCBIGRCr8
mRatBN7.2168,885,585 - 8,949,805 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl168,893,324 - 8,949,783 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx168,912,901 - 8,969,351 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01610,057,607 - 10,114,055 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0168,907,992 - 8,964,448 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0169,907,584 - 9,973,514 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl169,907,598 - 9,973,516 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01611,858,454 - 11,922,332 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4169,200,233 - 9,256,753 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1169,192,522 - 9,243,208 (+)NCBI
Celera166,258,200 - 6,314,563 (-)NCBICelera
Cytogenetic Map16p16NCBI
PTPN20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381046,911,428 - 47,003,653 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1046,911,396 - 47,002,488 (+)EnsemblGRCh38hg38GRCh38
GRCh371048,737,040 - 48,827,934 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361048,357,048 - 48,447,930 (-)NCBINCBI36Build 36hg18NCBI36
Celera1045,164,481 - 45,182,568 (-)NCBICelera
Cytogenetic Map10q11.22NCBI
HuRef1043,492,180 - 43,529,513 (-)NCBIHuRef
CHM1_11048,901,986 - 48,992,848 (-)NCBICHM1_1
T2T-CHM13v2.01047,800,189 - 47,916,646 (+)NCBIT2T-CHM13v2.0
Ptpn20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391433,311,150 - 33,362,711 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1433,311,164 - 33,362,711 (+)EnsemblGRCm39 Ensembl
GRCm381433,589,193 - 33,640,754 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1433,589,207 - 33,640,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv371434,402,456 - 34,453,940 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361432,418,362 - 32,469,846 (+)NCBIMGSCv36mm8
Celera1429,843,947 - 29,895,427 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1420.51NCBI
Ptpn20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555561,867,005 - 1,944,933 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555561,850,933 - 1,943,318 (+)NCBIChiLan1.0ChiLan1.0
PTPN20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2860,317,411 - 60,408,226 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11060,321,406 - 60,413,468 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01046,102,341 - 46,194,493 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PTPN20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12864,398 - 181,398 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2867,065 - 216,086 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha28291,083 - 405,913 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.028235,752 - 350,683 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl28235,772 - 350,780 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12842,965 - 157,761 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02884,168 - 198,993 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.028170,137 - 285,052 (-)NCBIUU_Cfam_GSD_1.0
Ptpn20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721380,899,848 - 80,974,947 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367282,116,780 - 2,176,317 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367282,102,676 - 2,176,882 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTPN20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1488,766,361 - 88,838,470 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11488,763,753 - 88,838,962 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21496,372,516 - 96,465,352 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PTPN20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1943,663,542 - 43,766,810 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl943,694,321 - 43,764,229 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660483,472,093 - 3,535,863 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Ptpn20
525 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:198
Count of miRNA genes:141
Interacting mature miRNAs:172
Transcripts:ENSRNOT00000027352
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 7
Low 8 6 6 6 43 10 29
Below cutoff 16 10 8 5 8 2 3 31 8 2 7 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000027352   ⟹   ENSRNOP00000027352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl168,893,324 - 8,949,783 (+)Ensembl
Rnor_6.0 Ensembl169,907,598 - 9,973,516 (+)Ensembl
RefSeq Acc Id: NM_001080149   ⟹   NP_001073618
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,899,579 - 8,956,037 (+)NCBI
mRatBN7.2168,893,324 - 8,949,784 (+)NCBI
Rnor_6.0169,915,338 - 9,973,514 (+)NCBI
Rnor_5.01611,858,454 - 11,922,332 (+)NCBI
RGSC_v3.4169,200,233 - 9,256,753 (+)RGD
Celera166,258,200 - 6,314,563 (-)RGD
Sequence:
RefSeq Acc Id: XM_006252765   ⟹   XP_006252827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,828 - 8,956,037 (+)NCBI
mRatBN7.2168,885,586 - 8,949,784 (+)NCBI
Rnor_6.0169,907,584 - 9,973,514 (+)NCBI
Rnor_5.01611,858,454 - 11,922,332 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006252767   ⟹   XP_006252829
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,840 - 8,956,037 (+)NCBI
mRatBN7.2168,885,585 - 8,949,800 (+)NCBI
Rnor_6.0169,907,584 - 9,973,508 (+)NCBI
Rnor_5.01611,858,454 - 11,922,332 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600087   ⟹   XP_017455576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,934 - 8,956,037 (+)NCBI
mRatBN7.2168,885,679 - 8,949,784 (+)NCBI
Rnor_6.0169,907,702 - 9,973,514 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039094470   ⟹   XP_038950398
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,905,563 - 8,956,037 (+)NCBI
mRatBN7.2168,899,308 - 8,949,804 (+)NCBI
RefSeq Acc Id: XM_039094471   ⟹   XP_038950399
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,905,563 - 8,956,037 (+)NCBI
mRatBN7.2168,899,308 - 8,949,805 (+)NCBI
RefSeq Acc Id: XM_039094472   ⟹   XP_038950400
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,841 - 8,956,037 (+)NCBI
mRatBN7.2168,885,586 - 8,949,802 (+)NCBI
RefSeq Acc Id: XM_063275362   ⟹   XP_063131432
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,928 - 8,956,037 (+)NCBI
RefSeq Acc Id: XM_063275363   ⟹   XP_063131433
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,905,563 - 8,956,037 (+)NCBI
RefSeq Acc Id: XM_063275364   ⟹   XP_063131434
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8168,891,840 - 8,956,037 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001073618   ⟸   NM_001080149
- UniProtKB: A1L1L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006252827   ⟸   XM_006252765
- Peptide Label: isoform X1
- UniProtKB: A1L1L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006252829   ⟸   XM_006252767
- Peptide Label: isoform X1
- UniProtKB: A1L1L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017455576   ⟸   XM_017600087
- Peptide Label: isoform X1
- UniProtKB: A1L1L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000027352   ⟸   ENSRNOT00000027352
RefSeq Acc Id: XP_038950400   ⟸   XM_039094472
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038950399   ⟸   XM_039094471
- Peptide Label: isoform X2
- UniProtKB: A6KFU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950398   ⟸   XM_039094470
- Peptide Label: isoform X2
- UniProtKB: A6KFU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131434   ⟸   XM_063275364
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063131432   ⟸   XM_063275362
- Peptide Label: isoform X1
- UniProtKB: A1L1L3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063131433   ⟸   XM_063275363
- Peptide Label: isoform X2
Protein Domains
Tyrosine specific protein phosphatases   Tyrosine-protein phosphatase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A1L1L3-F1-model_v2 AlphaFold A1L1L3 1-421 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699951
Promoter ID:EPDNEW_R10475
Type:single initiation site
Name:Ptpn20_1
Description:protein tyrosine phosphatase, non-receptor type 20
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0169,907,642 - 9,907,702EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309812 AgrOrtholog
BioCyc Gene G2FUF-12090 BioCyc
Ensembl Genes ENSRNOG00000020203 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055009735 UniProtKB/Swiss-Prot
  ENSRNOG00060013106 UniProtKB/Swiss-Prot
  ENSRNOG00065013683 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000027352 ENTREZGENE
  ENSRNOT00000027352.6 UniProtKB/Swiss-Prot
  ENSRNOT00055016485 UniProtKB/Swiss-Prot
  ENSRNOT00060022344 UniProtKB/Swiss-Prot
  ENSRNOT00065022510 UniProtKB/Swiss-Prot
Gene3D-CATH 3.90.190.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7114504 IMAGE-MGC_LOAD
InterPro Prot-tyrosine_phosphatase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTP_cat UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  Tyr_Pase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_dom UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
KEGG Report rno:306281 UniProtKB/Swiss-Prot
MGC_CLONE MGC:156764 IMAGE-MGC_LOAD
NCBI Gene 306281 ENTREZGENE
PANTHER NON-SPECIFIC PROTEIN-TYROSINE KINASE UniProtKB/Swiss-Prot
  TYROSINE-PROTEIN PHOSPHATASE UniProtKB/TrEMBL
  TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 UniProtKB/Swiss-Prot
  TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 20 UniProtKB/TrEMBL
Pfam Y_phosphatase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ptpn20 PhenoGen
PRINTS PRTYPHPHTASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TYR_PHOSPHATASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_PTP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000020203 RatGTEx
  ENSRNOG00055009735 RatGTEx
  ENSRNOG00060013106 RatGTEx
  ENSRNOG00065013683 RatGTEx
SMART PTPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPc_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP (Phosphotyrosine protein) phosphatases II UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A1L1L3 ENTREZGENE
  A6KFU0 ENTREZGENE, UniProtKB/TrEMBL
  PTN20_RAT UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-16 Ptpn20  protein tyrosine phosphatase, non-receptor type 20  Ptpn20b  protein tyrosine phosphatase, non-receptor type 20B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-02-02 Ptpn20b  protein tyrosine phosphatase, non-receptor type 20B  Ptpn20  protein tyrosine phosphatase, non-receptor type 20  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ptpn20  protein tyrosine phosphatase, non-receptor type 20   Ptpn20_predicted  protein tyrosine phosphatase, non-receptor type 20 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ptpn20_predicted  protein tyrosine phosphatase, non-receptor type 20 (predicted)      Symbol and Name status set to approved 70820 APPROVED