Trip13 (thyroid hormone receptor interactor 13)

Gene: Trip13 (thyroid hormone receptor interactor 13) Rattus norvegicus

Analyze

Symbol:

Trip13

Name:

thyroid hormone receptor interactor 13

RGD ID:

1308516

Description:

Predicted to enable identical protein binding activity. Predicted to be involved in several processes, including double-strand break repair; meiosis I; and negative regulation of nuclear division. Predicted to act upstream of or within germ cell development and meiosis I. Predicted to be located in male germ cell nucleus. Predicted to be active in chromosome and nucleus. Human ortholog(s) of this gene implicated in mosaic variegated aneuploidy syndrome 3. Orthologous to human TRIP13 (thyroid hormone receptor interactor 13); INTERACTS WITH 1-naphthyl isothiocyanate; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC292206; pachytene checkpoint protein 2 homolog; thyroid receptor-interacting protein 13; TR-interacting protein 13; TRIP-13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TRIP13 (thyroid hormone receptor interactor 13)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Trip13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Trip13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LOC129394329 (pachytene checkpoint protein 2 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TRIP13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Trip13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TRIP13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TRIP13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Trip13 (thyroid hormone receptor interactor 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TRIP13 (thyroid hormone receptor interactor 13)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Trip13 (thyroid hormone receptor interactor 13)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	trip13 (thyroid hormone receptor interactor 13)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PCH2	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pch-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	pch2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	trip13	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	31,185,700 - 31,230,638 (+)	NCBI		GRCr8
mRatBN7.2	1	29,357,093 - 29,402,078 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,357,130 - 29,402,074 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	29,158,523 - 29,203,557 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	35,158,377 - 35,203,413 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,359,151 - 29,404,185 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	31,967,980 - 32,012,923 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	31,967,978 - 32,012,919 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	33,392,425 - 33,437,368 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	30,165,330 - 30,210,271 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	30,168,274 - 30,213,214 (+)	NCBI
Celera	1	28,006,108 - 28,051,038 (+)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aneuploidy (ISO)

autosomal dominant dyskeratosis congenita 2 (ISO)

COVID-19 (ISO)

dopamine transporter deficiency syndrome (ISO)

genetic disease (ISO)

Germ Cell and Embryonal Neoplasms (ISO)

hepatocellular carcinoma (ISO)

interstitial lung disease 2 (ISO)

mosaic variegated aneuploidy syndrome (ISO)

mosaic variegated aneuploidy syndrome 3 (ISO)

nephroblastoma (ISO)

Oocyte/Zygote/Embryo Maturation Arrest 9 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dichloroethane (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3-dimethoxynaphthalene-1,4-dione (ISO)

2-palmitoylglycerol (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acetohydrazide (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

calcitriol (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

diazinon (ISO)

dibenzo[a,l]pyrene (ISO)

dibutyl phthalate (ISO)

dieldrin (EXP)

diethyl maleate (EXP)

dioxygen (ISO)

Enterolactone (ISO)

enzyme inhibitor (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

formaldehyde (ISO)

genistein (ISO)

heptachlor (EXP)

ivermectin (ISO)

Lasiocarpine (ISO)

leflunomide (ISO)

lidocaine (EXP)

linezolid (EXP)

mercury atom (ISO)

mercury(0) (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

mirex (EXP)

N-nitrosodiethylamine (ISO)

N-Nitrosopyrrolidine (ISO)

nickel atom (ISO)

niclosamide (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

perfluorooctanoic acid (ISO)

phenethyl isothiocyanate (ISO)

phenobarbital (ISO)

picoxystrobin (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

quercetin (ISO)

resveratrol (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

sodium fluoride (ISO)

sulforaphane (EXP)

sunitinib (ISO)

tacrolimus hydrate (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trimellitic anhydride (ISO)

troglitazone (ISO)

trovafloxacin (ISO)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

double-strand break repair (ISO,ISS)

female meiosis I (ISO)

male meiosis I (ISO)

meiotic recombination checkpoint signaling (IBA)

mitotic spindle assembly checkpoint signaling (ISO,ISS)

oocyte maturation (ISO)

oogenesis (IEA,ISO,ISS)

reciprocal meiotic recombination (IBA,IEA,ISO,ISS)

spermatid development (ISO)

spermatogenesis (IEA,ISO,ISS)

synaptonemal complex assembly (ISO,ISS)

Cellular Component

chromosome (IBA)

male germ cell nucleus (ISO)

nucleus (IBA,IEA)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

identical protein binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11591653	PMID:12477932	PMID:15489334	PMID:16169070	PMID:16189514	PMID:17696610	PMID:20711356	PMID:25416956	PMID:28553959

Genomics

Comparative Map Data

Trip13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	31,185,700 - 31,230,638 (+)	NCBI		GRCr8
mRatBN7.2	1	29,357,093 - 29,402,078 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,357,130 - 29,402,074 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	29,158,523 - 29,203,557 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	35,158,377 - 35,203,413 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,359,151 - 29,404,185 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	31,967,980 - 32,012,923 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	31,967,978 - 32,012,919 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	33,392,425 - 33,437,368 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	30,165,330 - 30,210,271 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	30,168,274 - 30,213,214 (+)	NCBI
Celera	1	28,006,108 - 28,051,038 (+)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

TRIP13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	892,884 - 919,348 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	892,884 - 919,357 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	892,999 - 918,235 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	946,004 - 971,160 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	946,003 - 971,158	NCBI
Celera	5	934,119 - 956,942 (+)	NCBI		Celera
Cytogenetic Map	5	p15.33	NCBI
HuRef	5	878,510 - 902,319 (+)	NCBI		HuRef
CHM1_1	5	892,681 - 916,387 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	798,936 - 824,664 (+)	NCBI		T2T-CHM13v2.0

Trip13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,060,577 - 74,085,855 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,059,466 - 74,085,903 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	73,912,450 - 73,937,795 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	73,911,347 - 73,937,784 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,049,910 - 74,075,215 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,377,349 - 74,403,784 (-)	NCBI		MGSCv36	mm8
Celera	13	76,242,042 - 76,267,349 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.15	NCBI

Trip13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	434,159 - 452,671 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	434,187 - 452,636 (+)	NCBI	ChiLan1.0	ChiLan1.0

LOC129394329
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	62,747,149 - 62,752,803 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	68,664,916 - 68,671,423 (+)	NCBI		NHGRI_mPanPan1

TRIP13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,522,940 - 11,539,885 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	11,522,940 - 11,539,885 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	16,033,842 - 16,050,187 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,424,655 - 11,441,021 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	11,424,655 - 11,441,021 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	11,475,417 - 11,491,720 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,455,172 - 11,471,463 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,665,947 - 11,682,409 (-)	NCBI		UU_Cfam_GSD_1.0

Trip13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	244,572,199 - 244,584,096 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936815	734,167 - 745,092 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936815	734,029 - 745,381 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIP13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	79,458,847 - 79,473,712 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	79,458,843 - 79,473,705 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TRIP13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	737,214 - 760,263 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	737,263 - 760,171 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	35,288,652 - 35,311,359 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trip13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	439,119 - 459,080 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	439,195 - 459,033 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Trip13
191 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	230
Count of miRNA genes:	168
Interacting mature miRNAs:	184
Transcripts:	ENSRNOT00000021532
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	1	32356093	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	1	32356093	Rat
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	1	32356093	Rat
738020	Pia8	Pristane induced arthritis QTL 8	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	1	65833076	Rat
1578650	Bmd6	Bone mineral density QTL 6	12.2		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	1	509108	43284926	Rat
1578651	Bmd7	Bone mineral density QTL 7	14.2		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	1	509108	43284926	Rat
1578669	Bss9	Bone structure and strength QTL 9	6.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	1	509108	43284926	Rat
1554320	Bmd1	Bone mineral density QTL 1	12.2	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	509108	86060548	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	2244390	43433040	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	4393289	49393289	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	9856001	54856001	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	10992065	55992065	Rat
1300167	Hrtrt2	Heart rate QTL 2	4.35		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	11481312	75088344	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	11481312	82174945	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	11481312	82174945	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	11481312	82174945	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	11481312	82174945	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	11481482	32355910	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	11835181	56835181	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	15431621	49361612	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	0.00000072	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	15431621	49361612	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	16206210	49268520	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	19333571	56983283	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	20763158	44095856	Rat
724520	Bp145	Blood pressure QTL 145	2.1	0.0024	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	20784828	65784828	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	22340647	49361612	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	22340647	49361612	Rat
1357400	Bw62	Body weight QTL62	4.05		inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	1	22340647	67340647	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	22340647	102268831	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	28879780	78430678	Rat

Markers in Region

RH129445

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	29,375,806 - 29,376,021 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	31,986,649 - 31,986,863	NCBI	Rnor6.0
Rnor_5.0	1	33,411,094 - 33,411,308	UniSTS	Rnor5.0
RGSC_v3.4	1	30,183,997 - 30,184,211	UniSTS	RGSC3.4
Celera	1	28,024,767 - 28,024,981	UniSTS
Cytogenetic Map	1	p11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	1	24	24	18	8	18			45	16	27
Low	2	11	24	15	11	15	3	3	29	12	14	11	3
Below cutoff		8	9	8		8	5	8		7			5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001011930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC083900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000021532 ⟹ ENSRNOP00000021532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	29,357,140 - 29,402,074 (+)	Ensembl
Rnor_6.0 Ensembl	1	31,967,982 - 32,012,919 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000081471 ⟹ ENSRNOP00000070709

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	29,357,130 - 29,376,156 (+)	Ensembl
Rnor_6.0 Ensembl	1	31,967,978 - 31,987,125 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000112286 ⟹ ENSRNOP00000076549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	29,357,140 - 29,402,074 (+)	Ensembl

RefSeq Acc Id:

NM_001011930 ⟹ NP_001011930

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,185,700 - 31,230,638 (+)	NCBI
mRatBN7.2	1	29,357,140 - 29,402,078 (+)	NCBI
Rnor_6.0	1	31,967,982 - 32,012,923 (+)	NCBI
Rnor_5.0	1	33,392,425 - 33,437,368 (+)	NCBI
RGSC_v3.4	1	30,165,330 - 30,210,271 (+)	RGD
Celera	1	28,006,108 - 28,051,038 (+)	RGD

Sequence:

show sequence

CGGCCAGGGTGGATCTTCGTACAGCTGAGAAGACTGTCCCACAGGGCGCCGAGAGGCGACCGCG
ACCTCATTCTGGCTGGCCGCATTTCCTCGGCTCCCGGCTGCGGCGCCATGGACGACGCGGTGGG
CGACCTGAAGCAAGCGCTTCCGTGTGTTGCCGAGTCGCCCGCGGTCCATGTGGAGGTTTTGCAG
CGCAGCGGAAGCACTGCAAAAAAAGAAGATATAAAGCAGAGCGTTTACAGGCTGCTCAAGAGGC
ATAACATTGTGTTTGGAGATTACGTGTGGACTGAGTTTGATGAGCCTTTTCTAACTAGAAATGT
TCAGTCGGTATCTATTGTTGACACAGAATTAAAGGCTAAAGACCCTCAGCCCATTGATCTGAGT
GCATGCACCATTGCACTTCACATCTTCCAGCTGAATGAAGAAGGCCCCAGCAGTGAAAATTTGG
ATGAAGAAACAGAAAATATAATTGCAGCAAGTCACTGGGTTTTGCCTGCAGCTGAATTTCATGG
GCTTTGGGATAGCCTCGTGTATGATGTGGAGGTCAAATCACATCTCCTTGACTATGTGATGACC
ACCTTACTATTCTCAGACAAGAATGTGGACAGCAACCTTATCACCTGGAACCGGGTGGTACTGC
TGCACGGTCCTCCGGGTACTGGAAAGACATCCCTTTGTAAGGCATTAGCCCAGAAACTGACCAT
CAGACTGTCAAGCAGGTACCGGTATGGCCAGTTAATTGAAATAAACAGCCACAGCCTATTTTCT
AAGTGGTTTTCAGAAAGTGGCAAGTTGGTAACTAAGATGTTCCAGAAGATTCAGGACTTGATTG
ATGATAAAGAAGCTTTGGTGTTTGTTCTGATTGATGAGGTGGAGAGTCTTACAGCTGCTCGAAA
TGCTTGCAGGGCAGGCGCAGAGCCATCAGATGCTATCCGTGTAGTCAATGCTGTGTTGACTCAG
ATTGATCAGATTAAAAGGCATTCCAATGTGGTGATTCTGACCACTTCCAACATCACTGAGAAGA
TTGATGTGGCCTTTGTGGATAGAGCTGACATCAAACAATATATTGGCCCCCCCTCTGCAGCAGC
CATCTTCAAAATCTACCTGTCTTGTTTAGAAGAACTGATGAAGTGCCAGATCATATATCCCCGT
CAGCAGCTGTTGACCCTTCGAGAGCTGGAAATGATTGGCTTCATTGAAAATAATGTGTCGAAGT
TGAGCCTCCTTTTGAGTGAAATTTCAAGGAAGAGTGAGGGCCTCAGCGGCCGGGTCTTGAGGAA
ACTTCCTTTCCTGGCTCATGCGCTGTATATCCAGGCTCCCAGCGTCACCATCGAGGGTTTCCTC
CAGGCCCTGTCACTGGCAGTGGACAAACAGTTTGAGGAGAAAAAGAAACTCTCAGCTCATGTTT
GATCCCAGACATCCATATCTGTGGTTTTCAATGGACAGGCCCTGCCAAGGGATTGCCACTTGTG
CAAATACCCCGGGAGAAAGGGGATTCCTGTGCCAATGTCCTCCTACGTACAGAGGAATGAATGC
AACTGCTGCTAATTCCTATGGAGGGAACACCTGCTACAGAGAGCCAGAGTGCCCTGTCTCTATC
TGCCCTGCTGGATATTCTGGAAGGTTCTGTAAGTCGGATCACACTGAGTGTGCTTCCAACCCCT
ACCACAATGGGGTGCTGTGCCAGGATGGCGTCAATAACTGCACCTGCTTCTGTATGCCTGGGTA
CCAAGGCAGGTGTTGTGACTTGAAAATTGAGTTTAAGTCTTTAACCAAATCTTTCAGTGGGTAC
ACACAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008758681 ⟹ XP_008756903

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,185,769 - 31,204,719 (+)	NCBI
mRatBN7.2	1	29,357,093 - 29,376,159 (+)	NCBI
Rnor_6.0	1	31,967,980 - 31,987,007 (+)	NCBI

Sequence:

show sequence

CTCGGCCAGGGTGGATCTTCGTACAGCTGAGAAGACTGTCCCACAGGGCGCCGAGAGGCGACCG
CGACCTCATTCTGGCTGGCCGCATTTCCTCGGCTCCCGGCTGCGGCGCCATGGACGACGCGGTG
GGCGACCTGAAGCAAGCGCTTCCGTGTGTTGCCGAGTCGCCCGCGGTCCATGTGGAGGTTTTGC
AGCGCAGCGGAAGCACTGCAAAAAAAGAAGATATAAAGCAGAGCGTTTACAGGCTGCTCAAGAG
GCATAACATTGTGTTTGGAGATTACGTGTGGACTGAGTTTGATGAGCCTTTTCTAACTAGAAAT
GTTCAGTCGGTATCTATTGTTGACACAGAATTAAAGGCTAAAGACCCTCAGCCCATTGATCTGA
GTGCATGCACCATTGCACTTCACATCTTCCAGCTGAATGAAGAAGGCCCCAGCAGTGAAAATTT
GGATGAAGAAACAGAAAATATAATTGCAGCAAGTCACTGGGTTTTGCCTGCAGCTGAATTTCAT
GGGCTTTGGGATAGCCTCGTGTATGATGTGGAGGTCAAATCACATCTCCTTGACTATGTGATGA
CCACCTTACTATTCTCAGACAAGAATGTGGACAGCAACCTTATCACCTGGAACCGGGTGGTACT
GCTGCACGGTCCTCCGGGTACTGGAAAGACATCCCTTTGTAAGGCATTAGCCCAGAAACTGACC
ATCAGACTGTCAAGCAGGTACCGGTATGGCCAGTTAATTGAAATAAACAGCCACAGCCTATTTT
CTAAGTGGTTTTCAGAAAGTGGCAAGTTGGTAACTAAGATGTTCCAGAAGATTCAGGACTTGAT
TGATGATAAAGAAGCTTTGGTGTTTGTTCTGATTGATGAGGTGGAGAGTCTTACAGCTGCTCGA
AATGCTTGCAGGGCAGGCGCAGAGCCATCAGATGCTATCCGTGTAGTCAATGCTGTGTTGACTC
AGATTGATCAGATTAAAAGGCATTCCAATGTGGTGATTCTGACCACTTCCAACATCACTGAGAA
GATTGATGTGGCCTTTGTGGATAGAGCTGACATCAAACAATATATTGGCCCCCCCTCTGCAGCA
GCCATCTTCAAAATCTACCTGTCTTGTTTAGAAGAACTGATGAAGTGCCAGATCATATATCCCC
GTCAGCAGCTGTTGACCCTTCGAGAGCTGGAAATGATTGGCTTCATTGAAAATAATGTGTCGAA
GTTGAGCCTCCTTTTGAGTGAAATTTCAAGGAAGAGTGAGGGCCTCAGCGGCCGGGTCTTGAGG
AAACTTCCTTTCCTGGCTCATGCGCTGTATATCCAGGCTCCCAGCGTCACCATCGAGGGTTTCC
TCCAGGCCCTGTCTCTGGCAGTGGACAAACAGTTTGAGGAGAAAAAGAAACTCTCAGCTCATGT
TTGATCCCAGACATCCATATCTGTGGTTTTCAATGGACAGGTAGGAGGTGATACCGTCTACCTC
ACAGTGTGCATCAGAAATGACTAAACCATGTAGGTCTGCAGGCCAGGCCAGACAGATGGGTGTA
CAGACTTTGTCAAAAGGACTGTTTGTGTTATTTTACAATGCACATTGAAAGGCAAACTGCCTGT
CTTTTTCACTGTTTTTAAAAGACAATTGATTCCAGTCTGTTTACATCTATGTAAAGCCCCATCC
TGACTCTAGCCTGTCAGACACAAGATGTTAAAATTTGTTTAAAATAAAGGGAGATCAAAACAGC
TTTCCTAGAGCAAGAGGAGTGCTGAATAATGCAGTTACGGCACTGAAAGATGGACTCTTGCTCC
GGCTAGAAGGGAGCGGCTACTTCCTGGCAGGAGTCTGCTTCGGTTAGCACCGGATGCTGTGGAA
TGGGTGAGAAAGACGTGCTCCTGTGATACAGAAACTGAGAAAAGGATTGCAGATAAGAAGATAA
AGACTTCTGTGATAGCGATCAGATGTTGTGTTCAGAGGAGCAGTACGTACTTTCTATGGTCAAG
AGAATCAGGCAATGTGTGTTTTGTTTTTCCAGTAATTTTACTCATATTTCAAGTGAAAATTCAT
GTTGTCAAATATAAAATAAGTCAATGTGTGTTGCACCTCACAGAATACCATGTTTTACTTCATC
TTCTGCTAAAAGTTTAGCATTAATACTTTGTACGTGAATACACTTTTAAATGGAATGCTGCCTT
TGTCATAGAATTTTTTGTAATATTAAACTTGTTTTCAGAATGCGCTTATTCCAA

hide sequence

RefSeq Acc Id:

XM_039103353 ⟹ XP_038959281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	31,185,769 - 31,216,605 (+)	NCBI
mRatBN7.2	1	29,357,093 - 29,387,739 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001011930	(Get FASTA)	NCBI Sequence Viewer
	XP_008756903	(Get FASTA)	NCBI Sequence Viewer
	XP_038959281	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83900	(Get FASTA)	NCBI Sequence Viewer
	EDL87668	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021532
	ENSRNOP00000021532.3
	ENSRNOP00000070709
	ENSRNOP00000070709.2
	ENSRNOP00000076549.1
	ENSRNOP00055003794
	ENSRNOP00060036173
	ENSRNOP00065024526
GenBank Protein	Q5XHZ9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001011930 ⟸ NM_001011930

- UniProtKB:

Q5XHZ9 (UniProtKB/Swiss-Prot), A6JUW1 (UniProtKB/TrEMBL), A0A8L2R3S2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDDAVGDLKQALPCVAESPAVHVEVLQRSGSTAKKEDIKQSVYRLLKRHNIVFGDYVWTEFDEP
FLTRNVQSVSIVDTELKAKDPQPIDLSACTIALHIFQLNEEGPSSENLDEETENIIAASHWVLP
AAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKAL
AQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVES
LTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFVDRADIKQYIG
PPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIGFIENNVSKLSLLLSEISRKSEGLS
GRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDKQFEEKKKLSAHV

hide sequence

RefSeq Acc Id:	XP_008756903 ⟸ XM_008758681
- Peptide Label:	isoform X1
- UniProtKB:	Q5XHZ9 (UniProtKB/Swiss-Prot), A6JUW1 (UniProtKB/TrEMBL), A0A8L2R3S2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDAVGDLKQALPCVAESPAVHVEVLQRSGSTAKKEDIKQSVYRLLKRHNIVFGDYVWTEFDEP FLTRNVQSVSIVDTELKAKDPQPIDLSACTIALHIFQLNEEGPSSENLDEETENIIAASHWVLP AAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKAL AQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVES LTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFVDRADIKQYIG PPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIGFIENNVSKLSLLLSEISRKSEGLS GRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDKQFEEKKKLSAHV hide sequence

RefSeq Acc Id:

ENSRNOP00000021532 ⟸ ENSRNOT00000021532

RefSeq Acc Id:

ENSRNOP00000070709 ⟸ ENSRNOT00000081471

RefSeq Acc Id:	XP_038959281 ⟸ XM_039103353
- Peptide Label:	isoform X1
- UniProtKB:	Q5XHZ9 (UniProtKB/Swiss-Prot), A6JUW1 (UniProtKB/TrEMBL), A0A8L2R3S2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000076549 ⟸ ENSRNOT00000112286

Protein Domains

AAA+ ATPase ATPase AAA-type core

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XHZ9-F1-model_v2	AlphaFold	Q5XHZ9	1-432	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13689571

Promoter ID:

EPDNEW_R88

Type:

initiation region

Name:

Trip13_1

Description:

thyroid hormone receptor interactor 13

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	31,967,966 - 31,968,026	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308516	AgrOrtholog
BioCyc Gene	G2FUF-61934	BioCyc
Ensembl Genes	ENSRNOG00000015810	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055003289	UniProtKB/Swiss-Prot
	ENSRNOG00060025164	UniProtKB/Swiss-Prot
	ENSRNOG00065018364	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000021532	ENTREZGENE
	ENSRNOT00000021532.5	UniProtKB/Swiss-Prot
	ENSRNOT00000081471.2	UniProtKB/TrEMBL
	ENSRNOT00000112286.1	UniProtKB/TrEMBL
	ENSRNOT00055005102	UniProtKB/Swiss-Prot
	ENSRNOT00060043626	UniProtKB/Swiss-Prot
	ENSRNOT00065030813	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7133557	IMAGE-MGC_LOAD
InterPro	AAA+_ATPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ATPase_AAA_core	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ATPase_AAA_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ClpA/B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pch2-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:292206	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:95258	IMAGE-MGC_LOAD
NCBI Gene	292206	ENTREZGENE
PANTHER	PACHYTENE CHECKPOINT PROTEIN 2 HOMOLOG	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR45991	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	AAA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Trip13	PhenoGen
PRINTS	CLPPROTEASEA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	AAA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015810	RatGTEx
	ENSRNOG00055003289	RatGTEx
	ENSRNOG00060025164	RatGTEx
	ENSRNOG00065018364	RatGTEx
SMART	AAA	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5Y057_RAT	UniProtKB/TrEMBL
	A0A8L2R3S2	ENTREZGENE, UniProtKB/TrEMBL
	A6JUW1	ENTREZGENE, UniProtKB/TrEMBL
	PCH2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Trip13	thyroid hormone receptor interactor 13	Trip13_predicted	thyroid hormone receptor interactor 13 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Trip13_predicted	thyroid hormone receptor interactor 13 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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